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The map label for this gene is mmgC [H]

Identifier: 114797077

GI number: 114797077

Start: 1903285

End: 1905054

Strand: Reverse

Name: mmgC [H]

Synonym: HNE_1845

Alternate gene names: 114797077

Gene position: 1905054-1903285 (Counterclockwise)

Preceding gene: 114799391

Following gene: 114799825

Centisome position: 51.42

GC content: 64.86

Gene sequence:

>1770_bases
ATGGCCTACGACGCACCGGTCAGCGACATTGAATTTGCCTTGAACGCATTCGCGCGGATCGGGCGGCTGCAGGGGCTGCC
CGGTCATGAGGCGTATGATCCCGATCTGGTGCGCCCGATCCTAGAGGAAGCGGCCAAGCTGGCGCGTGATGTGCTGGCGC
CGCTGAACCCTGTGGGCGATGCGCATGGCGCAGTGCTTAAAGATGGGGGCGTTGTGGCGCCGCCCGGCTTTGGGGACGCC
TACAAGGCATTCGTTGAGGGTGGCTGGATGGGGCTTGCCGCGCCTGAGGAATGGGGCGGCCAGGGGTTGCCGAAGGCTTT
GGCGCTTGGCGTGATGGAGATGTTCCACGGGGCGAACATGGCGTTCGGGCTCTGTCCGATGCTCAGCTATGGCGCGGTTG
AGGCGCTGCTCGCGCATGGCACCGATGTCCAGCGCGCGGCGTATCTGCCAAAGCTGGTGTCCGGCGAATGGACCGGCACG
ATGAACCTGACTGAGCCTCAGGCGGGCAGCGATGTCGGCGCGCTCAAGACCAAGGCCGAGCCATGTGAGGATGGCAGCTA
TTCAATCACCGGCCAGAAAATCTACATCACCTGGGGCGATCACGACATGGCTGAGAATATCATCCATCTCGTTCTGGCAC
GCCTGCCGGACGCGCCTGCCGGCTCCAAAGGTATTTCGCTGTTTCTCGTGCCGAAATTCATTCTGGATGCGGATGGAACA
CCCGGCGAGCGCAACGGTGTGCGCTGTATCGGGCTCGAGAAGAAGATGGGCATTCATGGCAGCCCGACCTGCGTCATGGA
GTATTCCGGCGCCAAGGGCTGGCTGATCGGCGAGGAAAATCGCGGGCTCGCCTGCATGTTCACGATGATGAACTCGGCGC
GCCTGAATGTGGGCCTTGAGGGCGTTGCGGTGGGGGAGGCGGCGTTCCAGACGGCGTTTGCTTACGCGCAGGAACGCAAG
CAAGGGGCAGCGGCTGGCGTGACAGGTCCGGCGCCGATCCTGCACCATGCGGATGTGCGCCGCACACTGACGACCATGCG
GGCGAAAGTGGCTGCAGCGCGGGCGATCTGTTACGCTTGCGGGGTGGCGGCAGATCTCGCGCACAGTTCGCCTGATCCGG
ATGTGCGCGCCGCGGCCAAGACGCGCGAAGACCTTCTGACGCCAATTGCCAAAGCCTGGAGCACGGATATCGGCGTTGAG
GTGGCGAGCCTGGGCGTGCAGGTGCATGGCGGCATGGGCTTCATGAACGAGACGCTGGCCGCTCAGCTTTACCGGGATGC
CCGCATCGCGCCGATTTATGAGGGCACGAACGGCATTCAGGCGATCGACCTAGTGGGCCGGAAACTTTCGGGCACGAAGG
GCGCCTCGATGCAGGCGATGATTGTCGAGGTTGAGGAAACGGTGCGGCAGGCGCGGGCGACAAATGATCCGCAGCTGGTG
CAGATCGCTGACCGGCTGAAGGCGGGCGCGGCGGCGCTATCTGAGGCGAGCGAGTGGATGGTGAAAACGCTGGCAGATGA
ACCCGAGAAGGGGCTTGCGGGCGCGACGGAGTATCTGGCGCTGGCCGGCGATGTGATCGGCGGGCATTTCCTGGCGCTCG
GCGCGATTGCGGCACGGAGCGGTCAAGATATGGATCAGCGGGCGCGGCAGCTGGCGCTGGCGGGGTTCTTTGCGGAAACG
TCGCTGGCCTCGGCGCCGGGGCGCGTGCCTGCGATCACCGAGGGCGGGGCGCGCTTCCTGGAGGGCAGCAAGGCGCTGTT
CGGCGTCTAG

Upstream 100 bases:

>100_bases
CGTATGGGAACACTCTAAGTAGTGCACTCATTTACAGTGTGAACCTCAACTTTAACATCTACGCGACATATCATTTATTC
AGAAACACAAAGGGATGGAC

Downstream 100 bases:

>100_bases
CAGCGGGCTGTTGCTGGCCGGGGCGGTGGCCGGTAAGAGGGGCGTTGATCCCCGAGGAGCGAACTGGCTGTGGCCTGGAC
CAAGACCTATACCGGCGATG

Product: acyl-CoA dehydrogenase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 588

Protein sequence:

>589_residues
MAYDAPVSDIEFALNAFARIGRLQGLPGHEAYDPDLVRPILEEAAKLARDVLAPLNPVGDAHGAVLKDGGVVAPPGFGDA
YKAFVEGGWMGLAAPEEWGGQGLPKALALGVMEMFHGANMAFGLCPMLSYGAVEALLAHGTDVQRAAYLPKLVSGEWTGT
MNLTEPQAGSDVGALKTKAEPCEDGSYSITGQKIYITWGDHDMAENIIHLVLARLPDAPAGSKGISLFLVPKFILDADGT
PGERNGVRCIGLEKKMGIHGSPTCVMEYSGAKGWLIGEENRGLACMFTMMNSARLNVGLEGVAVGEAAFQTAFAYAQERK
QGAAAGVTGPAPILHHADVRRTLTTMRAKVAAARAICYACGVAADLAHSSPDPDVRAAAKTREDLLTPIAKAWSTDIGVE
VASLGVQVHGGMGFMNETLAAQLYRDARIAPIYEGTNGIQAIDLVGRKLSGTKGASMQAMIVEVEETVRQARATNDPQLV
QIADRLKAGAAALSEASEWMVKTLADEPEKGLAGATEYLALAGDVIGGHFLALGAIAARSGQDMDQRARQLALAGFFAET
SLASAPGRVPAITEGGARFLEGSKALFGV

Sequences:

>Translated_589_residues
MAYDAPVSDIEFALNAFARIGRLQGLPGHEAYDPDLVRPILEEAAKLARDVLAPLNPVGDAHGAVLKDGGVVAPPGFGDA
YKAFVEGGWMGLAAPEEWGGQGLPKALALGVMEMFHGANMAFGLCPMLSYGAVEALLAHGTDVQRAAYLPKLVSGEWTGT
MNLTEPQAGSDVGALKTKAEPCEDGSYSITGQKIYITWGDHDMAENIIHLVLARLPDAPAGSKGISLFLVPKFILDADGT
PGERNGVRCIGLEKKMGIHGSPTCVMEYSGAKGWLIGEENRGLACMFTMMNSARLNVGLEGVAVGEAAFQTAFAYAQERK
QGAAAGVTGPAPILHHADVRRTLTTMRAKVAAARAICYACGVAADLAHSSPDPDVRAAAKTREDLLTPIAKAWSTDIGVE
VASLGVQVHGGMGFMNETLAAQLYRDARIAPIYEGTNGIQAIDLVGRKLSGTKGASMQAMIVEVEETVRQARATNDPQLV
QIADRLKAGAAALSEASEWMVKTLADEPEKGLAGATEYLALAGDVIGGHFLALGAIAARSGQDMDQRARQLALAGFFAET
SLASAPGRVPAITEGGARFLEGSKALFGV
>Mature_588_residues
AYDAPVSDIEFALNAFARIGRLQGLPGHEAYDPDLVRPILEEAAKLARDVLAPLNPVGDAHGAVLKDGGVVAPPGFGDAY
KAFVEGGWMGLAAPEEWGGQGLPKALALGVMEMFHGANMAFGLCPMLSYGAVEALLAHGTDVQRAAYLPKLVSGEWTGTM
NLTEPQAGSDVGALKTKAEPCEDGSYSITGQKIYITWGDHDMAENIIHLVLARLPDAPAGSKGISLFLVPKFILDADGTP
GERNGVRCIGLEKKMGIHGSPTCVMEYSGAKGWLIGEENRGLACMFTMMNSARLNVGLEGVAVGEAAFQTAFAYAQERKQ
GAAAGVTGPAPILHHADVRRTLTTMRAKVAAARAICYACGVAADLAHSSPDPDVRAAAKTREDLLTPIAKAWSTDIGVEV
ASLGVQVHGGMGFMNETLAAQLYRDARIAPIYEGTNGIQAIDLVGRKLSGTKGASMQAMIVEVEETVRQARATNDPQLVQ
IADRLKAGAAALSEASEWMVKTLADEPEKGLAGATEYLALAGDVIGGHFLALGAIAARSGQDMDQRARQLALAGFFAETS
LASAPGRVPAITEGGARFLEGSKALFGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=371, Percent_Identity=29.3800539083558, Blast_Score=123, Evalue=6e-28,
Organism=Homo sapiens, GI226958414, Length=371, Percent_Identity=29.3800539083558, Blast_Score=122, Evalue=7e-28,
Organism=Homo sapiens, GI4501857, Length=315, Percent_Identity=28.8888888888889, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI4557233, Length=379, Percent_Identity=27.9683377308707, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI4501859, Length=405, Percent_Identity=25.9259259259259, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI21361497, Length=395, Percent_Identity=26.5822784810127, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI76496475, Length=370, Percent_Identity=28.1081081081081, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI4557235, Length=370, Percent_Identity=28.1081081081081, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI4557231, Length=376, Percent_Identity=30.8510638297872, Blast_Score=96, Evalue=9e-20,
Organism=Homo sapiens, GI187960098, Length=376, Percent_Identity=30.8510638297872, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI7656849, Length=381, Percent_Identity=25.9842519685039, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI4503943, Length=324, Percent_Identity=25.3086419753086, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI7669494, Length=243, Percent_Identity=27.5720164609054, Blast_Score=67, Evalue=6e-11,
Organism=Escherichia coli, GI87082384, Length=345, Percent_Identity=28.1159420289855, Blast_Score=122, Evalue=7e-29,
Organism=Escherichia coli, GI87081958, Length=380, Percent_Identity=26.5789473684211, Blast_Score=80, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17508101, Length=360, Percent_Identity=29.4444444444444, Blast_Score=128, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17506239, Length=420, Percent_Identity=27.3809523809524, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17538396, Length=379, Percent_Identity=29.287598944591, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71985184, Length=362, Percent_Identity=27.0718232044199, Blast_Score=114, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI86563383, Length=414, Percent_Identity=26.8115942028986, Blast_Score=111, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI86563381, Length=414, Percent_Identity=26.8115942028986, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17569725, Length=420, Percent_Identity=29.2857142857143, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17534899, Length=427, Percent_Identity=28.3372365339578, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI71990804, Length=278, Percent_Identity=28.0575539568345, Blast_Score=93, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17570075, Length=365, Percent_Identity=26.5753424657534, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17533517, Length=421, Percent_Identity=23.9904988123515, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI32563615, Length=237, Percent_Identity=28.6919831223629, Blast_Score=85, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI71985192, Length=288, Percent_Identity=25.6944444444444, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17551932, Length=368, Percent_Identity=25.8152173913043, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17505929, Length=367, Percent_Identity=26.9754768392371, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21356377, Length=368, Percent_Identity=29.3478260869565, Blast_Score=119, Evalue=6e-27,
Organism=Drosophila melanogaster, GI24666513, Length=424, Percent_Identity=28.7735849056604, Blast_Score=115, Evalue=9e-26,
Organism=Drosophila melanogaster, GI21355753, Length=376, Percent_Identity=30.3191489361702, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24646207, Length=364, Percent_Identity=27.4725274725275, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI281363737, Length=398, Percent_Identity=25.6281407035176, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24660351, Length=327, Percent_Identity=29.9694189602446, Blast_Score=92, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 61576; Mature: 61445

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYDAPVSDIEFALNAFARIGRLQGLPGHEAYDPDLVRPILEEAAKLARDVLAPLNPVGD
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
AHGAVLKDGGVVAPPGFGDAYKAFVEGGWMGLAAPEEWGGQGLPKALALGVMEMFHGANM
CCCCEEECCCEECCCCCCHHHHHHHCCCEEECCCCHHCCCCCCHHHHHHHHHHHHCCCCC
AFGLCPMLSYGAVEALLAHGTDVQRAAYLPKLVSGEWTGTMNLTEPQAGSDVGALKTKAE
HHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHCCCCCCEEECCCCCCCCCCCHHCCCCC
PCEDGSYSITGQKIYITWGDHDMAENIIHLVLARLPDAPAGSKGISLFLVPKFILDADGT
CCCCCCEEEECCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHEECCCCC
PGERNGVRCIGLEKKMGIHGSPTCVMEYSGAKGWLIGEENRGLACMFTMMNSARLNVGLE
CCCCCCEEEEEEHHCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEHHCCCEECCCCC
GVAVGEAAFQTAFAYAQERKQGAAAGVTGPAPILHHADVRRTLTTMRAKVAAARAICYAC
EEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVAADLAHSSPDPDVRAAAKTREDLLTPIAKAWSTDIGVEVASLGVQVHGGMGFMNETLA
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHCCEEEECCCCHHHHHHH
AQLYRDARIAPIYEGTNGIQAIDLVGRKLSGTKGASMQAMIVEVEETVRQARATNDPQLV
HHHHHCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCHHHEEHHHHHHHHHHHCCCCCHHH
QIADRLKAGAAALSEASEWMVKTLADEPEKGLAGATEYLALAGDVIGGHFLALGAIAARS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
GQDMDQRARQLALAGFFAETSLASAPGRVPAITEGGARFLEGSKALFGV
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHCCCCHHCCC
>Mature Secondary Structure 
AYDAPVSDIEFALNAFARIGRLQGLPGHEAYDPDLVRPILEEAAKLARDVLAPLNPVGD
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
AHGAVLKDGGVVAPPGFGDAYKAFVEGGWMGLAAPEEWGGQGLPKALALGVMEMFHGANM
CCCCEEECCCEECCCCCCHHHHHHHCCCEEECCCCHHCCCCCCHHHHHHHHHHHHCCCCC
AFGLCPMLSYGAVEALLAHGTDVQRAAYLPKLVSGEWTGTMNLTEPQAGSDVGALKTKAE
HHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHCCCCCCEEECCCCCCCCCCCHHCCCCC
PCEDGSYSITGQKIYITWGDHDMAENIIHLVLARLPDAPAGSKGISLFLVPKFILDADGT
CCCCCCEEEECCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHEECCCCC
PGERNGVRCIGLEKKMGIHGSPTCVMEYSGAKGWLIGEENRGLACMFTMMNSARLNVGLE
CCCCCCEEEEEEHHCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEHHCCCEECCCCC
GVAVGEAAFQTAFAYAQERKQGAAAGVTGPAPILHHADVRRTLTTMRAKVAAARAICYAC
EEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVAADLAHSSPDPDVRAAAKTREDLLTPIAKAWSTDIGVEVASLGVQVHGGMGFMNETLA
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHCCEEEECCCCHHHHHHH
AQLYRDARIAPIYEGTNGIQAIDLVGRKLSGTKGASMQAMIVEVEETVRQARATNDPQLV
HHHHHCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCHHHEEHHHHHHHHHHHCCCCCHHH
QIADRLKAGAAALSEASEWMVKTLADEPEKGLAGATEYLALAGDVIGGHFLALGAIAARS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
GQDMDQRARQLALAGFFAETSLASAPGRVPAITEGGARFLEGSKALFGV
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]