Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

Click here to switch to the map view.

The map label for this gene is rph

Identifier: 114564986

GI number:

Start: 4574888

End: 4575601

Strand: Reverse

Name: rph

Synonym: Sfri_3836

Alternate gene names: NA

Gene position: NA

Preceding gene: 114564992

Following gene: 114564985

Centisome position: NA

GC content: NA

Gene sequence:

>714_bases
ATGCGCCCAAGTAACCGTACACCAGCTCAAACTCGCCCTATCACTATTACGCGTTCTTTTACTGCACATGCTGAAGGCTC
TGTTTTAGTTGAGTTTGGCGACACAAAAGTATTATGTACAGCAAGTTTCACTGAAGGCGTGCCGCGCTTTCTTAAAGGCC
AAGGCCAAGGTTGGGTAACAGCTGAATACGGTATGTTACCGCGTTCAACTCACAGCCGCATGGACCGTGAAGCGGCTCGT
GGTAAGCAGTCTGGCCGTACTCAAGAAATTCAACGTTTAATTGGTCGTGCATTACGTGCAGCTGTAGACATGAAGTTGTT
AGGTGAAAACACTATCGTTATCGATTGTGATGTTATTCAAGCTGATGGCGGTACGCGTACTGCGGCTATTACTGGTGCTT
GTGTGGCGTTAGTTGATGCGCTTAACTGGGCTCGTGGTAAAGGCATTATTAAAGCTAACCCACTTAAGTTTTTAATTGCA
GCTGTTAGTGTTGGTATTTACAAAGGCGAAGCGATCAGTGATTTAGAATACATTGAAGACAGTGCTGCTGAAACTGACAT
GAACGTTGTGATGACAGAAACCGGTAAGATTATTGAAATTCAAGGTACTGCAGAAGGCGAGCCATTTAGCCATGAAGAGT
TACTTGAGTTGTTAGTGTTAGCTAAAAACAGTATTCGCGAAATTGTCGATGTGCAAAAAGCCGCATTAAGTTAA

Upstream 100 bases:

>100_bases
GATAGATTTGTGGCTTATCGCTGCTTACCATGGCATCTAACGGCGTGAAGCTCTATAATATGGGCTCAAATATGATATGA
ATTCGACTACAGGACTTTTC

Downstream 100 bases:

>100_bases
TATGCTGTTGAAAAATGAGGACCGATTACGGTCCTTTTTTTTAATCTAAAATTTGATGAAAGAGGAATAACCGTGAAAGC
CTATCAACGCGAATTTATTG

Product: ribonuclease PH

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>237_residues
MRPSNRTPAQTRPITITRSFTAHAEGSVLVEFGDTKVLCTASFTEGVPRFLKGQGQGWVTAEYGMLPRSTHSRMDREAAR
GKQSGRTQEIQRLIGRALRAAVDMKLLGENTIVIDCDVIQADGGTRTAAITGACVALVDALNWARGKGIIKANPLKFLIA
AVSVGIYKGEAISDLEYIEDSAAETDMNVVMTETGKIIEIQGTAEGEPFSHEELLELLVLAKNSIREIVDVQKAALS

Sequences:
NA

Specific function: NA

COG id: COG0689

COG function: function code J; RNase PH

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA