Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114564992

GI number:

Start: 4584098

End: 4587283

Strand: Reverse

Name: Not Available

Synonym: Sfri_3842

Alternate gene names: NA

Gene position: NA

Preceding gene: 114564993

Following gene: 114564986

Centisome position: NA

GC content: NA

Gene sequence:

>3186_bases
GTGTTTTCACTTTCAAAAGGCCTATCTGACATGGAACAAGTTGGTATTTATGAAAAGCTTATTACTCAACTAATAGATAA
AAGCATCAATCGTGATGTGTTCTATTTAGGTGAGCGGCCATTAGAAAGCGCTGAGGCCAGTGTTTGGCTATCGAGATTTT
TGACCAAGATAATGGAGAGTGCCATTGGTGCAATTCCCAGTGGCGATAATCAACTTACAGAGCAAATCGGCTTAGCAAAT
AAGTTGGTGCTGTGGTTGAAAGATCATGTTCAAGATGATCAATTGATCACTGAAAATTTACTCGATAGTAAAGGCCGTAT
ATTAACGGCACTATTTGATAAAACAAATCCTATAGCGACAGACTTTCCAGCGTTTACTAAGGCTATTTACCCGTTAACAG
GGTTAAGTCAAAGTGAACTTTTTTGTGGCAGCAATGCCGGAATTTCTTTGGACACAGAGTTAAAGCGCGAGATCCGTTCA
GCGGATAAAATTTATTGGTTAGTGTCTTTTATTAAGTGGGCCGGCATTCGAATTTTCAAGAATGAACTTGAAGAGTTTAC
TCGAAGTGGAAAAATCCTGCGGATCATCACGACATCTTATATGGGTGCGACAGATGCTAAAGCGGTCGATTTTTTAGCGA
GCTTACCTAACACCGAAGTTAAATTGAGTTACAACACCAAGCGCGAGCGCCTGCATGCGAAATCTTATTTATTTTTGCGC
AATACAGGATTTCATACTGGATACATAGGTTCATCGAATTTGTCCCATTCTGCGCTAACCAGTGGCCTTGAATGGAATTT
AAAAATAACCAGCCAAGAAATCCCCCACATCATAGATAAATCCCTCAACACCTTTGAATCATATTGGCAATCCAGTGAAT
TTGAATTATTTAAGGGCGATATTGAATCTAAAAACAAACTTCACGAGGCGTTGCGGGAAGCTAAGGGCGGTTACAGTGAC
GACAGTGCATTTCATTTTGATATAAAACCCTTTGCACATCAGCGAGAAATCCTTGAGCAGCTGGATGTTGAGCGCACAGT
TCATCAGCGCTATAAAAATCTAGTGGTTGCGGCAACGGGCACAGGTAAAACACTTATTTCAGCGTTTGATTTTGCCCGTT
TTTATAAACAGCACCCAGAAGCCAACTTTTTATTCGTGGCTCATAGACAAGAAATTCTTAAGCAAGCTCTGTCTGCATAC
CGTGGTGTATTGAAAAATAATCAGTTTGGTGAATTGTGGGTTGCTGAGCATAAACCTAATAGCTACCGGCATTTGTTTGC
TTCAATACAAAGCTTAAATTTGCAATTATCAAGCTTACCGCTCACCGCTGATTTTTATGATTATATTGTGATCGATGAAG
TACATCACATTGCAGCCAGTAGTTATCGAGGATTACTAGCGCATTTCTCACCCAAGATTTTATTGGGGTTAACCGCCACG
CCAGAGCGTCATGATGGGCAAAACATTCTGGATGACTTTTGTGGGGTAATAGCTGCAGAAATTCGTTTGCCCGAAGCAAT
CAATCAGCGCTATTTATGTCCTTTCCAATACTTTGCTATTGATGATGATACCGACCTTCGCAAAATTAAATGGCATCAAG
GGCGATATGATATTGCAGAGCTAAGTCATTTATATACTCATAATGAACAGAGAGTTGTGCGCATTATTAGCAGCCTGAAT
GATACAGTCACTGACATTCATCAAATAAAAGCTTTGGCGTTTTGTGTCAGCAAAGAACATGCAGAATACATGGCAAAGAA
GTTTAACTTAGCCGGTATTAGTGCGGATGTACTCACCAGTGATAATAGTCACGAGAGGCAACAAAAACGACAGAGTTTAA
TTAGCGGTCATGTGAACATTTTATGCGTGGTGGATATTTTTAATGAAGGTGTCGATATTCCAGACGTTGATACATTATTG
TTTTTACGTCCAACCGAAAGCTTAACGATCTTTTTGCAGCAGCTAGGACGAGGATTGCGTCTAACCGATGATAAACAGTG
CTGTACAGTATTGGATTTTGTGGGTAATTCTCGTGATGAATATGACTTTTCGCAAAAGTTTCGCGCGCTGGTTGGTAAAA
CGAATCAATCGATTAAAGATGAGATAACCAATGATTTTCCTCACTTGCCATTAGGCTGTCGGATCGAGCTAGAAGAACAG
ACTCAGGCAATGATTTTACGAAATATTAGCCGTGCAACCATGAATGCTAGCAGGCTGCGACAGCTCATTAACAATTTTGG
GCACCAAAGTACGCTTACCTTAAGCTTGGTTAATTTTTTACGCTTTAATCCAAATGTTAATTTAGAAGACATTTATAAGC
TAAAAATGAGTTGGTTAGAATTGGTTGGTAGTGCAAATAACAATCAAATTAATGAACAAAATTTAAACGTAATTCTAGCT
AAAGCCTACTATCGTGCGATAAATTATCATTTGCTCGGCTGCAATTCCATTTCATATTTGCAGTTTTTAAAGCAGCTAAT
TATCGATAACTTCAGTTTCGATGATATGGATGCGACCCAGTGCCAATTTGCATTAATGTGCCACTATAATTTTTGGGATA
AGTCAGGAACCGAGCTAGGTTTTACTAGCCTTAAGCAAAGTTTAGCTGCGTTGAGACATACTCAATTACAAGCAGAACTG
CTTGATGTTATATCGTTACTTATAGATCGAATTCATCATAGCGAACTTGAAATGCATATCCCCTCAATACCTACCTTAAA
AGTGCATTCAAGATATACTAGGGAACAAATACTCGCCGCCAGTGGTGCAAGTTCTTTTGACAGAAAATCAACCGCAAGGG
AAGGCGTTTTAGTCCTTAACGATCTTAACGTTGAATTACTGTTTGTGACCTTGAAAAAGTCAGTCAAACAATTTTCACCA
ACCACCATGTTCCATGACTACGCAATTAATGAATCGCTATTCCATTGGCAATCTCAAAATAGTGCGAGACCCGAATATGG
CAAAGGTTTAAGCTATATCGAGCATGAAAAAATGGGCCGTAAATTGATTTTGTTTGTGCGTGAACAAGCGAAAGATGAAA
ACGGTCGCACCATGGGTTTTGTCAATTTTGGCGAAGCGGTTTACATAGAACACTCTGGAGCGCAGCCTATCAATATAACA
TGGAAGTTAATGACTCCCATGCCTGATGCTATGTGGCATGAAGCTGCAAAATTAGCCGTAGGATAA

Upstream 100 bases:

>100_bases
GTGTTGGTGCGCTAATTTAATCGTTGTTCTGTAAGCATTTTATTGATAAATAATATTATTCTTAGTCGTAATATGCACTT
ATTGCTATGGTATATTCTTA

Downstream 100 bases:

>100_bases
GCTAACCATATTGGCATCTGCTGCTGTTGAAAACAGGATGTTTTCGTCAAGCCTCCATGGATGAGTTTACGGTGTATTGC
AGGGGACGATATGGTGGGCG

Product: type III restriction enzyme, res subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1061_residues
MFSLSKGLSDMEQVGIYEKLITQLIDKSINRDVFYLGERPLESAEASVWLSRFLTKIMESAIGAIPSGDNQLTEQIGLAN
KLVLWLKDHVQDDQLITENLLDSKGRILTALFDKTNPIATDFPAFTKAIYPLTGLSQSELFCGSNAGISLDTELKREIRS
ADKIYWLVSFIKWAGIRIFKNELEEFTRSGKILRIITTSYMGATDAKAVDFLASLPNTEVKLSYNTKRERLHAKSYLFLR
NTGFHTGYIGSSNLSHSALTSGLEWNLKITSQEIPHIIDKSLNTFESYWQSSEFELFKGDIESKNKLHEALREAKGGYSD
DSAFHFDIKPFAHQREILEQLDVERTVHQRYKNLVVAATGTGKTLISAFDFARFYKQHPEANFLFVAHRQEILKQALSAY
RGVLKNNQFGELWVAEHKPNSYRHLFASIQSLNLQLSSLPLTADFYDYIVIDEVHHIAASSYRGLLAHFSPKILLGLTAT
PERHDGQNILDDFCGVIAAEIRLPEAINQRYLCPFQYFAIDDDTDLRKIKWHQGRYDIAELSHLYTHNEQRVVRIISSLN
DTVTDIHQIKALAFCVSKEHAEYMAKKFNLAGISADVLTSDNSHERQQKRQSLISGHVNILCVVDIFNEGVDIPDVDTLL
FLRPTESLTIFLQQLGRGLRLTDDKQCCTVLDFVGNSRDEYDFSQKFRALVGKTNQSIKDEITNDFPHLPLGCRIELEEQ
TQAMILRNISRATMNASRLRQLINNFGHQSTLTLSLVNFLRFNPNVNLEDIYKLKMSWLELVGSANNNQINEQNLNVILA
KAYYRAINYHLLGCNSISYLQFLKQLIIDNFSFDDMDATQCQFALMCHYNFWDKSGTELGFTSLKQSLAALRHTQLQAEL
LDVISLLIDRIHHSELEMHIPSIPTLKVHSRYTREQILAASGASSFDRKSTAREGVLVLNDLNVELLFVTLKKSVKQFSP
TTMFHDYAINESLFHWQSQNSARPEYGKGLSYIEHEKMGRKLILFVREQAKDENGRTMGFVNFGEAVYIEHSGAQPINIT
WKLMTPMPDAMWHEAAKLAVG

Sequences:
NA

Specific function: NA

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA