Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

Click here to switch to the map view.

The map label for this gene is recF

Identifier: 114561191

GI number:

Start: 2617

End: 3699

Strand: Direct

Name: recF

Synonym: Sfri_0003

Alternate gene names: NA

Gene position: NA

Preceding gene: 114561190

Following gene: 114561192

Centisome position: NA

GC content: NA

Gene sequence:

>1083_bases
ATGAGTTTATCACGCATTAACATTGGTTCATTTCGTAATATTACCTCTGCTTCATTACAGCCTTGTGATGGCTTAAATTT
GATTTACGGTCAAAATGGCAGTGGCAAAACCAGTATTCTTGAAGCGATTTACTTCTTGGGAATGGGGCGTTCGTTTCGCA
GCCATTTATCCCAACGAGTGATCAATAATGATGATGATAAACTGACCTTATTTGCGCATTTAATTGATGCAGATAGAGAT
TGTAAAATTGGCTTACGTCGTCATCGAAGTGGTGAGATCGAAGTAAAAATTGATGGCGAGAAAGTGAAGCGTTTATCAAC
CCTGGCCGAAACATTACCCATTCAAGTTATTACTCCCGAAAGTTTTTCTTTATTGTTCGAGGGACCTAAAGCCCGCCGTC
AATTTATCGATTGGGGTGCATTTCATTCTGATCCACATTTTTATCAAGCTTGGGTGAATACTCGAAAGGTATTAAAGCAA
CGAAACCAATTACTTAGAAATCAATCTTCCTATAACCAAATACAGTTTTGGGATAAGGAGTTGGTGCGGTATGCTGAACA
GGTTACCGATATACGAAATCAATATGTAGACTCGTTAAATGTGCTACTAAAGGGTATAATCGGAGTGTTTTTACCTCGGA
TTGATATTAAGGTTTCTTTTACTCGAGGATGGGATAGTAAAACGGATTTTGCCCAATTACTTGAAAACCAATACTCAAGA
GATTTAGCCGCTGGAAATACGGGCAGCGGCCCCCATAAAGCAGACTTACGTTTGCGTGTGGGTAATTTGCCAGCGCAGGA
TGCGTTGTCCCGTGGACAATTAAAATTATTAGTCTGTGCACTGCGTATTGCACAGGGAAAGTTGCTCAAACAACAACTAG
ATAAAAATAGTATTTATCTAGTCGACGATTTACCGTCGGAGTTGGATGCACAGCATAGGCAGCTATTGCTACAGCTGTTA
ACCGAAACCGGTGCACAAATTTTTGTCACTGCGATCGATCCGCAAGCAATAGTCGATTCGTTATCTAGCCCTCCAAACAG
GATGTTTCATGTGGAACAAGGGCTGGTAACGGTTATTGAATAA

Upstream 100 bases:

>100_bases
ATGCGCCTGTAATGCGTTATTGTGTTATTGCTATATCAAAGGTGCTGCAAAGCACCTTCTTTGTCTCTAGCGTTTTATTG
GGTTATCACAATAGGTCTTC

Downstream 100 bases:

>100_bases
CAACGAGAGATAAATATGTCAGAGAATAGTTACGATTCTTCGAGTATCAAGGTATTAAAAGGCCTTGATGCAGTCCGTAA
GAGACCTGGTATGTACATTG

Product: recombination protein F

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>360_residues
MSLSRINIGSFRNITSASLQPCDGLNLIYGQNGSGKTSILEAIYFLGMGRSFRSHLSQRVINNDDDKLTLFAHLIDADRD
CKIGLRRHRSGEIEVKIDGEKVKRLSTLAETLPIQVITPESFSLLFEGPKARRQFIDWGAFHSDPHFYQAWVNTRKVLKQ
RNQLLRNQSSYNQIQFWDKELVRYAEQVTDIRNQYVDSLNVLLKGIIGVFLPRIDIKVSFTRGWDSKTDFAQLLENQYSR
DLAAGNTGSGPHKADLRLRVGNLPAQDALSRGQLKLLVCALRIAQGKLLKQQLDKNSIYLVDDLPSELDAQHRQLLLQLL
TETGAQIFVTAIDPQAIVDSLSSPPNRMFHVEQGLVTVIE

Sequences:
NA

Specific function: NA

COG id: COG1195

COG function: function code L; Recombinational DNA repair ATPase (RecF pathway)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA