| Definition | Shewanella frigidimarina NCIMB 400, complete genome. |
|---|---|
| Accession | NC_008345 |
| Length | 4,845,257 |
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Identifier: 114561192
GI number:
Start: 3715
End: 6132
Strand: Direct
Name: Not Available
Synonym: Sfri_0004
Alternate gene names: NA
Gene position: NA
Preceding gene: 114561191
Following gene: 114561193
Centisome position: NA
GC content: NA
Gene sequence:
>2418_bases ATGTCAGAGAATAGTTACGATTCTTCGAGTATCAAGGTATTAAAAGGCCTTGATGCAGTCCGTAAGAGACCTGGTATGTA CATTGGTGATACTGATGATGGCACAGGTCTTCATCACATGGTATTCGAAGTGGTCGATAACTCTATCGATGAAGCTTTAG CAGGCCATTGTAGTGATATCACCATTAGCATTCATTCAGATGGTTCAGTCTCAGTAAAAGACGATGGTCGTGGTATTCCT GTTTCGATACATGAAGAAGAGGGTATCTCTGCCGCTGAAGTTATTATGACCGTACTTCATGCTGGCGGTAAGTTTGATGA TAACTCTTATAAAGTCTCTGGTGGTCTGCACGGTGTGGGTGTATCTGTAGTTAACGCGTTATCGCAAAAACTGCAGTTAA CCATTCGTAGAGCAGGTAAAGTCTATGAGCAGTTTTATACTCATGGTGTACCCGATGCGCCTATCAAAGAAATTGGTGAT GCGGTTAAAACCGGTACCGAACTCCGCTTCTGGCCAAGTAGTGACACGTTTACTGATGTTGAATTTCATTTTGAAATTTT AGCCAAACGCGTACGCGAACTATCATTTTTGAACTCTGGTGTAGGCATTCGTTTAGTTGACGAGCGCGACGGTAAAGATG AGTTCTTTAAGTATGAAGGCGGTATTAGTGCTTTTGTTGATTACTTAAACCGTAACAAAACGCCGATTAACAAAGATGTT TTCCATTTTTCTCATGAACGCGAAGACGGTATCACCGTTGAAGTTGCTATGCAGTGGAACGATGGTTATCAAGAGAATAT TTTTTGTTTTACCAATAACATCCCACAACGCGACGGTGGTACTCACTTAGCCGGTTTCCGTGGTGCATTAACACGTAACT TGAATAACTACATGGAACGTGAAGGGTTTAACAAAAAAGGTAAGACTAGTGCCACAGGTGATGATGCGCGTGAAGGCTTG ACCGCGGTTATTTCAGTAAAAGTACCTGATCCAAAGTTTAGCTCGCAAACTAAAGACAAACTTGTGTCTAGTGAAGTGAA AAGCGCGGTTGAACAAACAATGGGTGAGCAGTTAAATGATTACCTATTAGAAAACCCAGCCGATGCTAAATTAATTGTTG GTAAAATTGTTGATGCTGCACGTGCTCGTGAAGCGGCGCGTAAAGCGCGTGAAATGACACGTCGTAAAGGCGCGTTAGAT TTAGGTGGTTTGCCAGGTAAATTAGCTGACTGCCAAGAGAAAGATCCTGGTCTTTCTGAAATATATATAGTGGAAGGAGA CTCTGCTGGTGGATCAGCCAAGCAGGGACGTAACCGTAAAAACCAAGCGATTCTTCCGCTAAAAGGTAAGATCTTAAACG TAGAAAAAGCGCGTTTTGACAAGATGTTATCTTCACAAGAAGTGGCAACGCTGATTACTGCATTAGGTTGTGGCATTGGC CGCGATGAATATAATCCAGATAAGACTCGTTATCACAACATCATCATCATGACCGATGCTGACGTCGACGGCTCACACAT TCGTACTTTGCTGTTGACCTTCTTCTTCCGTCAAATGCCTGAATTGATCCAGCGTGGCTATATTTATATTGCTCAACCAC CACTTTTCAAAGTGAAAAAAGGTAAGCAAGAACAGTATTTGAAAGATGAGCCAGCATTGACTGAGTATTTAACCACTCAA GCTCTTGATGGTACCAATATTTATCCAAGCCCAGGTGCTTTTGGTATGTCTGGTGAGCCATTAGAGCGTTTAGTGGCACA GTATCGTGAAGTTGAGCGCATTATTAAGCGCCTAGAAAAACGTTACCCGACCAACCTACTTGACCGTATGTTGTATCACC CTGAAGTGACTGCCGCAGTGTTAAGTGATGAAGCGCAAATGACCGAATGGTGTAATGGCTTCATTGCAGATTTAGTTGAA CGTGAAAGTAGCGGTATTATTTTTACTGCCAATGTAATGCTTGACCCTGAGCGCAAGGTTTACACCCCTAGCGTGACAAT CCGTAAGCACGGTATCGATACTAACTATCTATTTGGTTATGACTTCTTCACTTCATCTGATTACCAGCGTATCGCTAAGT TAGGCGCGGCATTAGAGGGTATGATTGAAGAAGGTGGTTATGTACAACGTGGTGAACGTGTTAAAGAAGTTGAAAGCTTC TTAGAAGCATTAGATTGGACTATTAGTGAAGCGAAACGCGGCCTGTACATACAACGTTATAAAGGATTGGGCGAAATGAA CCCTGAACAATTGTGGGAAACTACAATGGATCCGGAATCACGTCGTATGTTACGCGTTACTATTGAAGATGCGGTAGCTG CTGATCAGCTATTCACATGTTTGATGGGTGACCAAGTTGAGCCGCGTCGTGAGTTTATTGAAACTAACGCGCTTAATGTG GCCAACTTAGACGTATAA
Upstream 100 bases:
>100_bases TCCGCAAGCAATAGTCGATTCGTTATCTAGCCCTCCAAACAGGATGTTTCATGTGGAACAAGGGCTGGTAACGGTTATTG AATAACAACGAGAGATAAAT
Downstream 100 bases:
>100_bases CATAAGTTTTGTGTAAAAATGGGTGCCTTTGGCACCCATTTTTGTTTTTAGTGCTATGGTTATAATCGTATTTACTTAAC ACTTCATAAGGCTATTTATA
Product: DNA gyrase, B subunit
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>805_residues MSENSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCSDITISIHSDGSVSVKDDGRGIP VSIHEEEGISAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLQLTIRRAGKVYEQFYTHGVPDAPIKEIGD AVKTGTELRFWPSSDTFTDVEFHFEILAKRVRELSFLNSGVGIRLVDERDGKDEFFKYEGGISAFVDYLNRNKTPINKDV FHFSHEREDGITVEVAMQWNDGYQENIFCFTNNIPQRDGGTHLAGFRGALTRNLNNYMEREGFNKKGKTSATGDDAREGL TAVISVKVPDPKFSSQTKDKLVSSEVKSAVEQTMGEQLNDYLLENPADAKLIVGKIVDAARAREAARKAREMTRRKGALD LGGLPGKLADCQEKDPGLSEIYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG RDEYNPDKTRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIQRGYIYIAQPPLFKVKKGKQEQYLKDEPALTEYLTTQ ALDGTNIYPSPGAFGMSGEPLERLVAQYREVERIIKRLEKRYPTNLLDRMLYHPEVTAAVLSDEAQMTEWCNGFIADLVE RESSGIIFTANVMLDPERKVYTPSVTIRKHGIDTNYLFGYDFFTSSDYQRIAKLGAALEGMIEEGGYVQRGERVKEVESF LEALDWTISEAKRGLYIQRYKGLGEMNPEQLWETTMDPESRRMLRVTIEDAVAADQLFTCLMGDQVEPRREFIETNALNV ANLDV
Sequences:
NA
Specific function: NA
COG id: COG0187
COG function: function code L; Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA