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The map label for this gene is parB [H]

Identifier: 114332386

GI number: 114332386

Start: 2548443

End: 2549276

Strand: Reverse

Name: parB [H]

Synonym: Neut_2434

Alternate gene names: 114332386

Gene position: 2549276-2548443 (Counterclockwise)

Preceding gene: 114332387

Following gene: 114332385

Centisome position: 95.8

GC content: 51.32

Gene sequence:

>834_bases
ATGGCAAAACCTAAAGGATTGGGGCGAGGTTTGGACGCGCTACTGGCAGACAATTCCCAGGAAACAGATTCGCTACAAAA
TCTTGCTGTGGATTTATTGCAGGCCGGGAAATACCAGCCCCGGACGAGGATGGATGAAGCATCCCTGCATGATTTGGCAG
AATCGGTCAAGGCGCAAGGGGTTATGCAGCCAATACTGGTACGACCGCTTGTGGCGGGTGGCTATGAAATTATTGCTGGG
GAACGCCGCTGGCGTGCTGCTCGGATTGCTGGACTGGAGCAGATTCCAGCCATTGTGCGCGAAGTGCCGGATGAATCCGC
ACTTGCGCTTTCTCTGATTGAAAATATTCAGCGCGAAGATCTTAACCCTCTAGAGGCAGCGACGGGAATTCAGCGTCTGA
TCGAAGAATTTGGTATGACGCACCAAACAGCTGGTCAGGCATTGGGTTATTCGCGCAGTGCGATCTCAAATTTGCTGCGC
CTGCTTAATCTGGCTGCCCCAGTGCAGGATCTGATTATGCAGGGAAAAATCGATATGGGACACGGGCGCGCCCTGCTCGC
GTTGGAGGCCGGGAAACAACTGGAAATTGCGCATCTGATTATGCAAAGGCAGCTATCCGTGCGTGAAACCGAAAATCTGC
TCAAGCGAATGAGTCAAGCATCTTCAGTAAGGAAACCGTCATTTCCGGATCGAGACCTGCTACGCCTGCAGGAAGATATA
TCTGCACGGCTGGGCGCCAATGTTGTAATCAAACAAGGGAAAAAAGGTGCTGGTAATGTCATCATTCATTACGCCAGTCT
TGAGCAATTGGACGGAATTCTTGCGAAATTCTGA

Upstream 100 bases:

>100_bases
CCCGGGCTTATCTTGAATTGGCCAACGAAATTCTGGCAACAGCTAGCTAGCTGACGATCTGGCCAGAAATCCATAATATT
TTTGATTGGGTACAGTAACT

Downstream 100 bases:

>100_bases
AGAACCTTGCGACAATCGCCCTGCTGGGATTGTTTTACATTCTGTAATCTTATCGCGTAATTTCTCTAACAGAGTAGTGA
GGATTATCCAAGTTATTAGA

Product: parB-like partition proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MAKPKGLGRGLDALLADNSQETDSLQNLAVDLLQAGKYQPRTRMDEASLHDLAESVKAQGVMQPILVRPLVAGGYEIIAG
ERRWRAARIAGLEQIPAIVREVPDESALALSLIENIQREDLNPLEAATGIQRLIEEFGMTHQTAGQALGYSRSAISNLLR
LLNLAAPVQDLIMQGKIDMGHGRALLALEAGKQLEIAHLIMQRQLSVRETENLLKRMSQASSVRKPSFPDRDLLRLQEDI
SARLGANVVIKQGKKGAGNVIIHYASLEQLDGILAKF

Sequences:

>Translated_277_residues
MAKPKGLGRGLDALLADNSQETDSLQNLAVDLLQAGKYQPRTRMDEASLHDLAESVKAQGVMQPILVRPLVAGGYEIIAG
ERRWRAARIAGLEQIPAIVREVPDESALALSLIENIQREDLNPLEAATGIQRLIEEFGMTHQTAGQALGYSRSAISNLLR
LLNLAAPVQDLIMQGKIDMGHGRALLALEAGKQLEIAHLIMQRQLSVRETENLLKRMSQASSVRKPSFPDRDLLRLQEDI
SARLGANVVIKQGKKGAGNVIIHYASLEQLDGILAKF
>Mature_276_residues
AKPKGLGRGLDALLADNSQETDSLQNLAVDLLQAGKYQPRTRMDEASLHDLAESVKAQGVMQPILVRPLVAGGYEIIAGE
RRWRAARIAGLEQIPAIVREVPDESALALSLIENIQREDLNPLEAATGIQRLIEEFGMTHQTAGQALGYSRSAISNLLRL
LNLAAPVQDLIMQGKIDMGHGRALLALEAGKQLEIAHLIMQRQLSVRETENLLKRMSQASSVRKPSFPDRDLLRLQEDIS
ARLGANVVIKQGKKGAGNVIIHYASLEQLDGILAKF

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 30270; Mature: 30138

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKPKGLGRGLDALLADNSQETDSLQNLAVDLLQAGKYQPRTRMDEASLHDLAESVKAQG
CCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
VMQPILVRPLVAGGYEIIAGERRWRAARIAGLEQIPAIVREVPDESALALSLIENIQRED
HHHHHHHHHHHHCCCCEEECCHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
LNPLEAATGIQRLIEEFGMTHQTAGQALGYSRSAISNLLRLLNLAAPVQDLIMQGKIDMG
CCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HGRALLALEAGKQLEIAHLIMQRQLSVRETENLLKRMSQASSVRKPSFPDRDLLRLQEDI
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
SARLGANVVIKQGKKGAGNVIIHYASLEQLDGILAKF
HHHHCCCEEEECCCCCCCCEEEEECCHHHHHHHHHCC
>Mature Secondary Structure 
AKPKGLGRGLDALLADNSQETDSLQNLAVDLLQAGKYQPRTRMDEASLHDLAESVKAQG
CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
VMQPILVRPLVAGGYEIIAGERRWRAARIAGLEQIPAIVREVPDESALALSLIENIQRED
HHHHHHHHHHHHCCCCEEECCHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
LNPLEAATGIQRLIEEFGMTHQTAGQALGYSRSAISNLLRLLNLAAPVQDLIMQGKIDMG
CCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HGRALLALEAGKQLEIAHLIMQRQLSVRETENLLKRMSQASSVRKPSFPDRDLLRLQEDI
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
SARLGANVVIKQGKKGAGNVIIHYASLEQLDGILAKF
HHHHCCCEEEECCCCCCCCEEEEECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232; 9683477 [H]