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The map label for this gene is rodZ [H]

Identifier: 114332134

GI number: 114332134

Start: 2299210

End: 2300286

Strand: Reverse

Name: rodZ [H]

Synonym: Neut_2169

Alternate gene names: 114332134

Gene position: 2300286-2299210 (Counterclockwise)

Preceding gene: 114332135

Following gene: 114332133

Centisome position: 86.44

GC content: 47.82

Gene sequence:

>1077_bases
ATGAAAGATAATGAAATAGATAAACAAGATACGCCAGGTATGGACCAGAATTCGGTGGCTGATAATAATATTGGTGCGGC
TCAGGAGAATTCTGATCAAGCTGGATCGTTTCAACCTGAACGCACAGAAATAATCTCGTCATTTCAAACCATTCAGGCGG
ATCCCCCAACTGATACAGAAAAGACAGGTGGTGCAGCAACGCCCAATTTTGGACAAAGATTGCGTGATGAGAGAATCAGG
CGCGGCATGAATATTGGTGAAGTGGCGCATCGGTTACGTTTGTCTGAACAACAGATAGAAGCAATCGAAGCGCAAGATTT
TTCCAGGCTTCCTGCTGCTGTATTTCTGCGTGGTTATGTGCGTAATTATGCCAACTTGTTGCAGCTCGATGATACGACTC
TGCTTGTGGAGGCTGTGCCTCAATCTCGGCCAGCAGACAGTGTTTTTACCAGCAAGAATCCATCGCAGCGTTTCAAAGCA
ATAGAACCTGTTTACCAGTCTGATCGTGGTGGCCGGAGCGGATGGCTGTTGTATGTTGCGGTAATATTGGCGGCATTTGC
AGCTTATGGGTTTTATCATGAAGAAATACCGGAGAAGATGGCACCCTATATGCTGAATGAGGGAGATCAAGTTATCCAGT
CCGGTTCCAGCAGCGAGAATGATCAGGTGGCGATAGATTTGGCACTACCCTTGTCTCCAACTGCTTCGGTATCTTCTCCT
ATGGCACCGCCTGCATCGGCGAGTGTCAATCTGCCACCAGCTGCGGCAGTCTTGCCTGCTTTGCCTGCCCCATCGGCCCC
GGTTGCGGATACAGCCAAGGCTCCAGATAATGGTAAAAAATCATTACACTTTGTCTTTTCCAAGGATTCCTGGGTAAAAA
TCAAGGATAGTAATGGGCAGATCATTCTCGAAAAAATTAATTCGCGAGGAACTGAGCAGACGATAGAAGGAGAGCCGCCC
TTGTATCTCGTGATCGGCAATGCAGCCGGGGTCAGTCTTACCTATAACGGACACAAGGTTGATCTTGCACCCTATACCCG
CGGCAATGATGATGTCGCACGCTTTTCACTTGAATAA

Upstream 100 bases:

>100_bases
AACGGGGATATCAATGCAGAAACCAATTATGCTTTTCAATTACAGAAGCGTTTTCCCGATTCCAGTGAAGCCAGGGAATT
GCGTGCAGGCAGATTGAATC

Downstream 100 bases:

>100_bases
CCTGTATAAATTTCTGAGATCCGAGTGTTAACCATGTCTTCTAATAACGTACCTGCCCCGCGCCGAAAGTGTGTGGGTGT
CAAAGTGGGTTCGGTGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MKDNEIDKQDTPGMDQNSVADNNIGAAQENSDQAGSFQPERTEIISSFQTIQADPPTDTEKTGGAATPNFGQRLRDERIR
RGMNIGEVAHRLRLSEQQIEAIEAQDFSRLPAAVFLRGYVRNYANLLQLDDTTLLVEAVPQSRPADSVFTSKNPSQRFKA
IEPVYQSDRGGRSGWLLYVAVILAAFAAYGFYHEEIPEKMAPYMLNEGDQVIQSGSSSENDQVAIDLALPLSPTASVSSP
MAPPASASVNLPPAAAVLPALPAPSAPVADTAKAPDNGKKSLHFVFSKDSWVKIKDSNGQIILEKINSRGTEQTIEGEPP
LYLVIGNAAGVSLTYNGHKVDLAPYTRGNDDVARFSLE

Sequences:

>Translated_358_residues
MKDNEIDKQDTPGMDQNSVADNNIGAAQENSDQAGSFQPERTEIISSFQTIQADPPTDTEKTGGAATPNFGQRLRDERIR
RGMNIGEVAHRLRLSEQQIEAIEAQDFSRLPAAVFLRGYVRNYANLLQLDDTTLLVEAVPQSRPADSVFTSKNPSQRFKA
IEPVYQSDRGGRSGWLLYVAVILAAFAAYGFYHEEIPEKMAPYMLNEGDQVIQSGSSSENDQVAIDLALPLSPTASVSSP
MAPPASASVNLPPAAAVLPALPAPSAPVADTAKAPDNGKKSLHFVFSKDSWVKIKDSNGQIILEKINSRGTEQTIEGEPP
LYLVIGNAAGVSLTYNGHKVDLAPYTRGNDDVARFSLE
>Mature_358_residues
MKDNEIDKQDTPGMDQNSVADNNIGAAQENSDQAGSFQPERTEIISSFQTIQADPPTDTEKTGGAATPNFGQRLRDERIR
RGMNIGEVAHRLRLSEQQIEAIEAQDFSRLPAAVFLRGYVRNYANLLQLDDTTLLVEAVPQSRPADSVFTSKNPSQRFKA
IEPVYQSDRGGRSGWLLYVAVILAAFAAYGFYHEEIPEKMAPYMLNEGDQVIQSGSSSENDQVAIDLALPLSPTASVSSP
MAPPASASVNLPPAAAVLPALPAPSAPVADTAKAPDNGKKSLHFVFSKDSWVKIKDSNGQIILEKINSRGTEQTIEGEPP
LYLVIGNAAGVSLTYNGHKVDLAPYTRGNDDVARFSLE

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788864, Length=331, Percent_Identity=23.8670694864048, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 38728; Mature: 38728

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDNEIDKQDTPGMDQNSVADNNIGAAQENSDQAGSFQPERTEIISSFQTIQADPPTDTE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
KTGGAATPNFGQRLRDERIRRGMNIGEVAHRLRLSEQQIEAIEAQDFSRLPAAVFLRGYV
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHH
RNYANLLQLDDTTLLVEAVPQSRPADSVFTSKNPSQRFKAIEPVYQSDRGGRSGWLLYVA
HHHHHHEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
VILAAFAAYGFYHEEIPEKMAPYMLNEGDQVIQSGSSSENDQVAIDLALPLSPTASVSSP
HHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCC
MAPPASASVNLPPAAAVLPALPAPSAPVADTAKAPDNGKKSLHFVFSKDSWVKIKDSNGQ
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCC
IILEKINSRGTEQTIEGEPPLYLVIGNAAGVSLTYNGHKVDLAPYTRGNDDVARFSLE
EEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCEEEECCCCCCCCCCEEEECC
>Mature Secondary Structure
MKDNEIDKQDTPGMDQNSVADNNIGAAQENSDQAGSFQPERTEIISSFQTIQADPPTDTE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
KTGGAATPNFGQRLRDERIRRGMNIGEVAHRLRLSEQQIEAIEAQDFSRLPAAVFLRGYV
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHH
RNYANLLQLDDTTLLVEAVPQSRPADSVFTSKNPSQRFKAIEPVYQSDRGGRSGWLLYVA
HHHHHHEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
VILAAFAAYGFYHEEIPEKMAPYMLNEGDQVIQSGSSSENDQVAIDLALPLSPTASVSSP
HHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCC
MAPPASASVNLPPAAAVLPALPAPSAPVADTAKAPDNGKKSLHFVFSKDSWVKIKDSNGQ
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCC
IILEKINSRGTEQTIEGEPPLYLVIGNAAGVSLTYNGHKVDLAPYTRGNDDVARFSLE
EEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCEEEECCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA