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The map label for this gene is yuxH [H]

Identifier: 114332091

GI number: 114332091

Start: 2254378

End: 2255607

Strand: Reverse

Name: yuxH [H]

Synonym: Neut_2126

Alternate gene names: 114332091

Gene position: 2255607-2254378 (Counterclockwise)

Preceding gene: 114332092

Following gene: 114332090

Centisome position: 84.76

GC content: 44.63

Gene sequence:

>1230_bases
ATGGAAAATGCTTTTTTGGGCAAGCAACCAATTCTGGATCGCAATCAGAAGTTGATCGCTTATGAGCTCCTGTTTCGGAC
AGCAATGGATATTAACCAGGCAGAAGTTTCAGATGGTTTTCATGCTTCGGCCAACGTGGTGGTGAACGCATACGGTTACC
TGGGTATCCAGCAGGTTCTTGGTAATCTGCGCGGGTTTATCAATATCGATCATGGATTGCTTCTGGATGATGTGGTTTTG
TTGTTACCCAGTAAACATGTAGTTCTGGAGCTGCTGGAGACTATCCCGGCGACCCCTGAAGTGGTACAGCGTTGCGCCGA
ATTGAAACGGATGGGGTACAACCTTGCGTTGGATGACGTGACTTGTATTGATGATAGAACCGAAGCATTGCTCCCGTTTG
CCAATGTAATTAAGGTCGATGTATTAGCATTGACGGATGCAGAAATTAGTCAATTGATCCAGAAACTGAAAGCATGGCCG
GTTATCCTGCTGGCAGAGAAGGTGAATAGTCCGGAGCGGGCGAGGATATGTATGGATTTGGGATTTGAGATGTTCCAGGG
CTACTTCTTTGCCAAACCTATCATTGTTTCAGGTAGCAAGATCAAATCCAGCAGATTATTTCTGTTGCGTTTGTTGTCGT
TAGTGATGCACGGTGCCGAGATTGATGAGATTGAGCGGTTATTCAAGCACAAACCAGGCCTGAGCTATAGTCTTTTACGT
GTGGTTAATTCTGTGGCAGCAGCATTACCTCATAAAATCGGCTCTATACGACAGGCTTTGATAGTGATGGGCTATCGTCC
TTTACAAAGATGGATTCAGTTACTGCTCTATGCTGCTGATCCTGCCGGAAAATTAACCAATAACAATGCATTGATGCAAA
CAGCTGCCATTCGCGGAAGGTTGATGGAGCTGATTGCTACCATTGATCGCCCGCATGATAAGAATTACCAAGATCGAGCT
TTCATGACTGGAATAATGTCTTTACTGGATACATTGTTCAGTATGGATATTCAACAGATAGTGAATAAACTGGAAATGCC
AGATGAAGTTATTCGTGCGCTGTTGCATCGTGAAGGACGACTTGGCTGCAAATTGAGACTGATTGAAGCCAGAGAAAAAA
GGGATATGAAACAAGTAGAGAGCATTATGACTGGGCTTGAATTCCTGGATCAAACCAGCTTGGCAAAAGCAGAGCTTGAT
GCCCTGGATTGGGCCAATCATATACATTAG

Upstream 100 bases:

>100_bases
AGCCAGAAATCCTTACTAAAACGAGCGGATGAAGCGCTTTGTCAGGCCAAGAAATCCGGTAAAAATCGCATCATGATTGC
CTCTTAATAGCAGATATTTA

Downstream 100 bases:

>100_bases
TCGCTTCGCATGAGAAACTCGAGGTAGTTTAACCCCTGTATCACGGGGTTGTAGAGCCGAGCCACGTCGGCCACAGCGTC
ACGTGTGTCTGGCGGTTGAG

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MENAFLGKQPILDRNQKLIAYELLFRTAMDINQAEVSDGFHASANVVVNAYGYLGIQQVLGNLRGFINIDHGLLLDDVVL
LLPSKHVVLELLETIPATPEVVQRCAELKRMGYNLALDDVTCIDDRTEALLPFANVIKVDVLALTDAEISQLIQKLKAWP
VILLAEKVNSPERARICMDLGFEMFQGYFFAKPIIVSGSKIKSSRLFLLRLLSLVMHGAEIDEIERLFKHKPGLSYSLLR
VVNSVAAALPHKIGSIRQALIVMGYRPLQRWIQLLLYAADPAGKLTNNNALMQTAAIRGRLMELIATIDRPHDKNYQDRA
FMTGIMSLLDTLFSMDIQQIVNKLEMPDEVIRALLHREGRLGCKLRLIEAREKRDMKQVESIMTGLEFLDQTSLAKAELD
ALDWANHIH

Sequences:

>Translated_409_residues
MENAFLGKQPILDRNQKLIAYELLFRTAMDINQAEVSDGFHASANVVVNAYGYLGIQQVLGNLRGFINIDHGLLLDDVVL
LLPSKHVVLELLETIPATPEVVQRCAELKRMGYNLALDDVTCIDDRTEALLPFANVIKVDVLALTDAEISQLIQKLKAWP
VILLAEKVNSPERARICMDLGFEMFQGYFFAKPIIVSGSKIKSSRLFLLRLLSLVMHGAEIDEIERLFKHKPGLSYSLLR
VVNSVAAALPHKIGSIRQALIVMGYRPLQRWIQLLLYAADPAGKLTNNNALMQTAAIRGRLMELIATIDRPHDKNYQDRA
FMTGIMSLLDTLFSMDIQQIVNKLEMPDEVIRALLHREGRLGCKLRLIEAREKRDMKQVESIMTGLEFLDQTSLAKAELD
ALDWANHIH
>Mature_409_residues
MENAFLGKQPILDRNQKLIAYELLFRTAMDINQAEVSDGFHASANVVVNAYGYLGIQQVLGNLRGFINIDHGLLLDDVVL
LLPSKHVVLELLETIPATPEVVQRCAELKRMGYNLALDDVTCIDDRTEALLPFANVIKVDVLALTDAEISQLIQKLKAWP
VILLAEKVNSPERARICMDLGFEMFQGYFFAKPIIVSGSKIKSSRLFLLRLLSLVMHGAEIDEIERLFKHKPGLSYSLLR
VVNSVAAALPHKIGSIRQALIVMGYRPLQRWIQLLLYAADPAGKLTNNNALMQTAAIRGRLMELIATIDRPHDKNYQDRA
FMTGIMSLLDTLFSMDIQQIVNKLEMPDEVIRALLHREGRLGCKLRLIEAREKRDMKQVESIMTGLEFLDQTSLAKAELD
ALDWANHIH

Specific function: Unknown

COG id: COG3434

COG function: function code T; Predicted signal transduction protein containing EAL and modified HD-GYP domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014408
- InterPro:   IPR001633
- InterPro:   IPR013976 [H]

Pfam domain/function: PF00563 EAL; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 46074; Mature: 46074

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENAFLGKQPILDRNQKLIAYELLFRTAMDINQAEVSDGFHASANVVVNAYGYLGIQQVL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEHHHHHHHHHHH
GNLRGFINIDHGLLLDDVVLLLPSKHVVLELLETIPATPEVVQRCAELKRMGYNLALDDV
HHHHCEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCE
TCIDDRTEALLPFANVIKVDVLALTDAEISQLIQKLKAWPVILLAEKVNSPERARICMDL
EECCCCHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHCCEEEEHHHCCCCHHHHHHHHH
GFEMFQGYFFAKPIIVSGSKIKSSRLFLLRLLSLVMHGAEIDEIERLFKHKPGLSYSLLR
CHHHHCCHHHHCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHH
VVNSVAAALPHKIGSIRQALIVMGYRPLQRWIQLLLYAADPAGKLTNNNALMQTAAIRGR
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LMELIATIDRPHDKNYQDRAFMTGIMSLLDTLFSMDIQQIVNKLEMPDEVIRALLHREGR
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
LGCKLRLIEAREKRDMKQVESIMTGLEFLDQTSLAKAELDALDWANHIH
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MENAFLGKQPILDRNQKLIAYELLFRTAMDINQAEVSDGFHASANVVVNAYGYLGIQQVL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEHHHHHHHHHHH
GNLRGFINIDHGLLLDDVVLLLPSKHVVLELLETIPATPEVVQRCAELKRMGYNLALDDV
HHHHCEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCE
TCIDDRTEALLPFANVIKVDVLALTDAEISQLIQKLKAWPVILLAEKVNSPERARICMDL
EECCCCHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHCCEEEEHHHCCCCHHHHHHHHH
GFEMFQGYFFAKPIIVSGSKIKSSRLFLLRLLSLVMHGAEIDEIERLFKHKPGLSYSLLR
CHHHHCCHHHHCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHH
VVNSVAAALPHKIGSIRQALIVMGYRPLQRWIQLLLYAADPAGKLTNNNALMQTAAIRGR
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LMELIATIDRPHDKNYQDRAFMTGIMSLLDTLFSMDIQQIVNKLEMPDEVIRALLHREGR
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
LGCKLRLIEAREKRDMKQVESIMTGLEFLDQTSLAKAELDALDWANHIH
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377; 1943994 [H]