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The map label for this gene is yccZ [C]

Identifier: 114332084

GI number: 114332084

Start: 2242349

End: 2243566

Strand: Direct

Name: yccZ [C]

Synonym: Neut_2119

Alternate gene names: 114332084

Gene position: 2242349-2243566 (Clockwise)

Preceding gene: 114332083

Following gene: 114332085

Centisome position: 84.27

GC content: 46.8

Gene sequence:

>1218_bases
ATGAATTTACAGCGTACAAGAGCATCCCTTGTTCTCTTGGTATTATTCGAACTTGCTGCCTGCTCCATTATTCCCGGACA
GCACATGAGTCCGTTTTCCCGGCAGTCCAGCACAGAAATGCCTACCCGGGAAAATGACGAAGCCATTTTAAAGAAACTCA
ATATTCAGACAATTGATGCCGAGCTGATCATTAAGTTAGAAAAAAATTATAAAAACTTCAGCCTCGCTCCTGATAACGTT
GCCAACCATTATTTTGATTACCGTATCGGCGCCAAAACGATCAAAGGTATTCCTATAGAAGATGAACCCTATACACAATA
CCGTGTAGGGCCACGGGACATTCTCAATATTACCGTCTGGGATCATCCTGAACTTACTATCCCGGCGGGCGAATTTCGTT
CTGCCGAATCTGCAGGAAATGTTGTTGGCGAAGATGGTACATTCTTTTATCCCTACGTGGGTGTCGTACAGGCGGCTGGA
AGAACAGTAGAGGAAATCCGCGAAGAACTGACCAGGAAGCTATCAAAGTACATCGAGTTCGTTCAGCTTGATGTACGGGT
AGCCGCCTACCGCAGCCAGCGGGTTTATGTGGTAGGCGAGGTGGCCAACCCTGGCGTTCAACTGGTGAAAGATATACCTC
TGACTGTCCTGGAAGCGATTAACAATGCAGGAGGAGCAAGCCAGGAAGCAGATTTACGTAATATCATCCTGACTCGGAAT
GACAAAACCTACAGTATCAATCTGCTCAGCCTCTATGAAGGCGGCGATATTACGCAGAATGTGTTACTCCAGCATGGAGA
TGTATTGAATGTACCGGATAGTGCGTTAAACAAGGTTTTCGTACTGGGTGAAACCAATTACTTTGTCGCAGGGGGAGCTA
CCGGGCGATCGCGTAGTTTGGTAATGAATAAAGCACGTATGACACTTACTGAAGCATTAAGTGAAGCAGGTGGCTTTGAT
CAAACTACTTCAGACCCAGCCAGAATTTTTGTTTTCCGTGGCGGGCTGGGCAAGCCGGAGATCTACCATCTGGACGCCAA
ATCACCTGATGCATTACTGCTTGCAGATCGCTTTCCGCTACAACCACGTGATGTCATCTATGTTGATCGCGCCGAGGGGA
TACGCTGGAACCAGATCATCGGACAAATTCAGCCGACAATTAATTTGCTGAATTCATTTGATGGCTCGCTGAGAATTCAA
CCCTTTCTGAGACACTAG

Upstream 100 bases:

>100_bases
ATAATGCTCATTGAGCAGGCTGTGGATCAATGGGTAACAAAATTGTAAAAATCTGCCAGAGAAATATTTCTTGACAGAAA
ACCATCAGCTTCATTCAATT

Downstream 100 bases:

>100_bases
TTACGTGGATATATGCCACACATTACTGCGACAGGATAGTCATACCCGAATACATGACTCATTCATTACCTGACATGCCA
TCTGATCAAAACAGTGACGA

Product: polysaccharide export protein

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MNLQRTRASLVLLVLFELAACSIIPGQHMSPFSRQSSTEMPTRENDEAILKKLNIQTIDAELIIKLEKNYKNFSLAPDNV
ANHYFDYRIGAKTIKGIPIEDEPYTQYRVGPRDILNITVWDHPELTIPAGEFRSAESAGNVVGEDGTFFYPYVGVVQAAG
RTVEEIREELTRKLSKYIEFVQLDVRVAAYRSQRVYVVGEVANPGVQLVKDIPLTVLEAINNAGGASQEADLRNIILTRN
DKTYSINLLSLYEGGDITQNVLLQHGDVLNVPDSALNKVFVLGETNYFVAGGATGRSRSLVMNKARMTLTEALSEAGGFD
QTTSDPARIFVFRGGLGKPEIYHLDAKSPDALLLADRFPLQPRDVIYVDRAEGIRWNQIIGQIQPTINLLNSFDGSLRIQ
PFLRH

Sequences:

>Translated_405_residues
MNLQRTRASLVLLVLFELAACSIIPGQHMSPFSRQSSTEMPTRENDEAILKKLNIQTIDAELIIKLEKNYKNFSLAPDNV
ANHYFDYRIGAKTIKGIPIEDEPYTQYRVGPRDILNITVWDHPELTIPAGEFRSAESAGNVVGEDGTFFYPYVGVVQAAG
RTVEEIREELTRKLSKYIEFVQLDVRVAAYRSQRVYVVGEVANPGVQLVKDIPLTVLEAINNAGGASQEADLRNIILTRN
DKTYSINLLSLYEGGDITQNVLLQHGDVLNVPDSALNKVFVLGETNYFVAGGATGRSRSLVMNKARMTLTEALSEAGGFD
QTTSDPARIFVFRGGLGKPEIYHLDAKSPDALLLADRFPLQPRDVIYVDRAEGIRWNQIIGQIQPTINLLNSFDGSLRIQ
PFLRH
>Mature_405_residues
MNLQRTRASLVLLVLFELAACSIIPGQHMSPFSRQSSTEMPTRENDEAILKKLNIQTIDAELIIKLEKNYKNFSLAPDNV
ANHYFDYRIGAKTIKGIPIEDEPYTQYRVGPRDILNITVWDHPELTIPAGEFRSAESAGNVVGEDGTFFYPYVGVVQAAG
RTVEEIREELTRKLSKYIEFVQLDVRVAAYRSQRVYVVGEVANPGVQLVKDIPLTVLEAINNAGGASQEADLRNIILTRN
DKTYSINLLSLYEGGDITQNVLLQHGDVLNVPDSALNKVFVLGETNYFVAGGATGRSRSLVMNKARMTLTEALSEAGGFD
QTTSDPARIFVFRGGLGKPEIYHLDAKSPDALLLADRFPLQPRDVIYVDRAEGIRWNQIIGQIQPTINLLNSFDGSLRIQ
PFLRH

Specific function: May be involved in polysaccharide transport [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=390, Percent_Identity=38.974358974359, Blast_Score=273, Evalue=1e-74,
Organism=Escherichia coli, GI1788376, Length=389, Percent_Identity=39.8457583547558, Blast_Score=270, Evalue=1e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 45124; Mature: 45124

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLQRTRASLVLLVLFELAACSIIPGQHMSPFSRQSSTEMPTRENDEAILKKLNIQTIDA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEECE
ELIIKLEKNYKNFSLAPDNVANHYFDYRIGAKTIKGIPIEDEPYTQYRVGPRDILNITVW
EEEEEEECCCCCCCCCCCHHHHCEEEEEECCHHCCCCCCCCCCCCEEECCCCCEEEEEEE
DHPELTIPAGEFRSAESAGNVVGEDGTFFYPYVGVVQAAGRTVEEIREELTRKLSKYIEF
CCCCEEECCHHCCCCHHCCCEECCCCCEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VQLDVRVAAYRSQRVYVVGEVANPGVQLVKDIPLTVLEAINNAGGASQEADLRNIILTRN
HHHHEEEEEECCCEEEEEEECCCCCHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEEEEC
DKTYSINLLSLYEGGDITQNVLLQHGDVLNVPDSALNKVFVLGETNYFVAGGATGRSRSL
CCEEEEEEEEEECCCCHHHHHHHHCCCCCCCCHHHHCEEEEEECCCEEEEECCCCCCCHH
VMNKARMTLTEALSEAGGFDQTTSDPARIFVFRGGLGKPEIYHLDAKSPDALLLADRFPL
HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCEEEEECCCCC
QPRDVIYVDRAEGIRWNQIIGQIQPTINLLNSFDGSLRIQPFLRH
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHCC
>Mature Secondary Structure
MNLQRTRASLVLLVLFELAACSIIPGQHMSPFSRQSSTEMPTRENDEAILKKLNIQTIDA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEECE
ELIIKLEKNYKNFSLAPDNVANHYFDYRIGAKTIKGIPIEDEPYTQYRVGPRDILNITVW
EEEEEEECCCCCCCCCCCHHHHCEEEEEECCHHCCCCCCCCCCCCEEECCCCCEEEEEEE
DHPELTIPAGEFRSAESAGNVVGEDGTFFYPYVGVVQAAGRTVEEIREELTRKLSKYIEF
CCCCEEECCHHCCCCHHCCCEECCCCCEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VQLDVRVAAYRSQRVYVVGEVANPGVQLVKDIPLTVLEAINNAGGASQEADLRNIILTRN
HHHHEEEEEECCCEEEEEEECCCCCHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEEEEC
DKTYSINLLSLYEGGDITQNVLLQHGDVLNVPDSALNKVFVLGETNYFVAGGATGRSRSL
CCEEEEEEEEEECCCCHHHHHHHHCCCCCCCCHHHHCEEEEEECCCEEEEECCCCCCCHH
VMNKARMTLTEALSEAGGFDQTTSDPARIFVFRGGLGKPEIYHLDAKSPDALLLADRFPL
HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCEEEEECCCCC
QPRDVIYVDRAEGIRWNQIIGQIQPTINLLNSFDGSLRIQPFLRH
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7896702 [H]