| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is epsB [H]
Identifier: 114332085
GI number: 114332085
Start: 2243620
End: 2245863
Strand: Direct
Name: epsB [H]
Synonym: Neut_2120
Alternate gene names: 114332085
Gene position: 2243620-2245863 (Clockwise)
Preceding gene: 114332084
Following gene: 114332086
Centisome position: 84.31
GC content: 45.45
Gene sequence:
>2244_bases ATGACTCATTCATTACCTGACATGCCATCTGATCAAAACAGTGACGAAATCGATCTGGGAGAACTGCTGGATATTCTGGC AGACAACAAGCAACTGATTTTTATCATCACCTTTATCACCTGCATGATCGGTGCTGCCATATCACTTTTAAGCTTGCCGA TCTATAAGGCGGACAGCTTGTTACAGGTCAGAGAAAATACACAATCCATGGTTGAACAACTGGATTCATTATCAACATTC TTTGAAACCAAAACGCCGGTTCAAGCTGAAATTGAATTGATCAAGTCCAGAATGATCCTGGGAAAAACAATTAGGAATTT GAGTCTGGATATTATTGCAACACCCAGGTTTTTTCCGTTCATAGGCGCCGCTGCAGCCAGATGGTTTCAACGCTTCCACG AGAGCGGCACCCTATCCAATCCACCATCTGAATGGCTATCACATTATGCCTGGGGAGGCGAGGTCATTCAGGTAGATACG CTTGAAATACCCGACAATTGGAAAAATGAAGAAATTATTTTGCAATCACTCGGCGAAAACCGCTTCGAGCTTATTTATCA GAATAAAGTCATTCTTGAGGGGGAAGTCGGCAAATTAGCTGCCAAGCAGCCAGAAGGCTCTCTGCACCCAATCAAGCTAT TTGTTACTCATCTGAAAGCACGTCCCAACACTCATTTCACTCTGATACGCCGCTCCCAAGGAGAAGCAATCCGACAACTA AAGGAAACTCTCTCGATTGCAGAAATTGGCAAGGGAACCGGCATTCTTCAATTAACCATCGAATCAGACAACCGAGCGAA AGCTGTTCAAATTGTTAACGAAATTGCCAATACCTATCTTCAGCAGAATGTCGAACAAAAATCAGCAGAATCCCAAAAAA CCCTTGAATTCCTGGAAAAACAGCTGCCCGCTCTCAAGGAACAACTTGAAACCACTACCAACGCCCTTAACGATTACAGA ATTCGCGAAGGTTCAATTAATCTCGATCTTGAAACCCAGAATATACTGACAGGTACGGTCGAGCTAAATACCCAGATTAC ACTTCTGCAACAAAAACGGGATGAACTGAGACAGAGATTTACGGAATCTCATCCTAATGTCGTTGCAATTGACAAGCAGA TCAGCAGACTGCAGACGCAAATCCATGCACTTGACAAAAAAATAGGCAAACTGCCGGAAACCCAGCAAATCATTCTCAGA TTATCTCGGGATGTGGAAGTCAATGCCGAGCTCTACACCACCTTGTTGAATCACGCTCAGACGATACGAGTAGCCAAAGC AGGTACGGTGGGTAATGTAAGAATTGTTGATTACGCTATACCGCCCGATCTACCGATCAAACCCAAAAAAACCCTGATCA TGGGTATTGCGCTCATGGCAGGATTAATGTTGGGAGTTATATTCGCCTTTATTCGCCGATCACTCAGCCGCGGGGTAGAA AATCCTGACATCATTGAAAAATCCCTGAATATTCCAGTTTATGCCACGGTTCAGCGCAGTAGACACCAGAAGCTGATCGA GAAAAAACTAAAAGGCAAACCTGTAGCAGGCAATCATCCTCCAATCATCCTGGCACTGGAAAACAGAGAAGATCTTGCCA TAGAGAGCCTGCGCAGTTTGCGAACAACCTTACACTTTGCATTTCTGGAGGCGCGTAACAACATCCTCATGATCACCGGC CCGAGTCCAGAAGCCGGAAAGACATTCATTTCGATGAATCTTGCTGCCGTCATGGCAGATGCCGGCAAAAATATTTTGTT GATCGATGGAGATCTGCGCAGGGGTGACATCAACAAGTCCATGCGCACAGGAAGAGAGAAAGGCCTGTCCGAATTAATCA GTCAATCGATCGATCTGAAGGATGCGACCAGATCTGTGCCCCAGGCAAATTTCCACTTCATTCCAACCGGAGCAATACCG CCTAACCCATCCGAGCTATTACTACACGAGCGATTCGAGCAAATTCTGGAAACTGTCAACAAGCAGTATGATTTGATCAT CATCGATTCACCTCCCATCCTGGCCGCTACCGACGCGGCCATTATCGGTCGCCTGGCAAGCGTGACATTGATGGTGGTTA GGGCTGGAACCCATCCGATGCGTGAGCTCGAACAAAGTGTAAAGAAACTTGTACTGGCAGGCGTAAATCTGAAGGGTGTG ATATTCAATGGCATTCCCGAAACTTCATCACGCCACAGATATACACAGTATAGCTACCAATATGATTATCGCAGCAAGAA ATGA
Upstream 100 bases:
>100_bases ATTCATTTGATGGCTCGCTGAGAATTCAACCCTTTCTGAGACACTAGTTACGTGGATATATGCCACACATTACTGCGACA GGATAGTCATACCCGAATAC
Downstream 100 bases:
>100_bases CAGAATTCGATCTCCCGAAGCAGCTCGCACTATTTATTATCAGCACGATACTGGCTGGCCTTACCATCCGACTGGCAATT CCTCTGGCACATATCAGCGG
Product: lipopolysaccharide biosynthesis
Products: ADP; protein tyrosine phosphate [C]
Alternate protein names: EPS I polysaccharide export protein epsB [H]
Number of amino acids: Translated: 747; Mature: 746
Protein sequence:
>747_residues MTHSLPDMPSDQNSDEIDLGELLDILADNKQLIFIITFITCMIGAAISLLSLPIYKADSLLQVRENTQSMVEQLDSLSTF FETKTPVQAEIELIKSRMILGKTIRNLSLDIIATPRFFPFIGAAAARWFQRFHESGTLSNPPSEWLSHYAWGGEVIQVDT LEIPDNWKNEEIILQSLGENRFELIYQNKVILEGEVGKLAAKQPEGSLHPIKLFVTHLKARPNTHFTLIRRSQGEAIRQL KETLSIAEIGKGTGILQLTIESDNRAKAVQIVNEIANTYLQQNVEQKSAESQKTLEFLEKQLPALKEQLETTTNALNDYR IREGSINLDLETQNILTGTVELNTQITLLQQKRDELRQRFTESHPNVVAIDKQISRLQTQIHALDKKIGKLPETQQIILR LSRDVEVNAELYTTLLNHAQTIRVAKAGTVGNVRIVDYAIPPDLPIKPKKTLIMGIALMAGLMLGVIFAFIRRSLSRGVE NPDIIEKSLNIPVYATVQRSRHQKLIEKKLKGKPVAGNHPPIILALENREDLAIESLRSLRTTLHFAFLEARNNILMITG PSPEAGKTFISMNLAAVMADAGKNILLIDGDLRRGDINKSMRTGREKGLSELISQSIDLKDATRSVPQANFHFIPTGAIP PNPSELLLHERFEQILETVNKQYDLIIIDSPPILAATDAAIIGRLASVTLMVVRAGTHPMRELEQSVKKLVLAGVNLKGV IFNGIPETSSRHRYTQYSYQYDYRSKK
Sequences:
>Translated_747_residues MTHSLPDMPSDQNSDEIDLGELLDILADNKQLIFIITFITCMIGAAISLLSLPIYKADSLLQVRENTQSMVEQLDSLSTF FETKTPVQAEIELIKSRMILGKTIRNLSLDIIATPRFFPFIGAAAARWFQRFHESGTLSNPPSEWLSHYAWGGEVIQVDT LEIPDNWKNEEIILQSLGENRFELIYQNKVILEGEVGKLAAKQPEGSLHPIKLFVTHLKARPNTHFTLIRRSQGEAIRQL KETLSIAEIGKGTGILQLTIESDNRAKAVQIVNEIANTYLQQNVEQKSAESQKTLEFLEKQLPALKEQLETTTNALNDYR IREGSINLDLETQNILTGTVELNTQITLLQQKRDELRQRFTESHPNVVAIDKQISRLQTQIHALDKKIGKLPETQQIILR LSRDVEVNAELYTTLLNHAQTIRVAKAGTVGNVRIVDYAIPPDLPIKPKKTLIMGIALMAGLMLGVIFAFIRRSLSRGVE NPDIIEKSLNIPVYATVQRSRHQKLIEKKLKGKPVAGNHPPIILALENREDLAIESLRSLRTTLHFAFLEARNNILMITG PSPEAGKTFISMNLAAVMADAGKNILLIDGDLRRGDINKSMRTGREKGLSELISQSIDLKDATRSVPQANFHFIPTGAIP PNPSELLLHERFEQILETVNKQYDLIIIDSPPILAATDAAIIGRLASVTLMVVRAGTHPMRELEQSVKKLVLAGVNLKGV IFNGIPETSSRHRYTQYSYQYDYRSKK >Mature_746_residues THSLPDMPSDQNSDEIDLGELLDILADNKQLIFIITFITCMIGAAISLLSLPIYKADSLLQVRENTQSMVEQLDSLSTFF ETKTPVQAEIELIKSRMILGKTIRNLSLDIIATPRFFPFIGAAAARWFQRFHESGTLSNPPSEWLSHYAWGGEVIQVDTL EIPDNWKNEEIILQSLGENRFELIYQNKVILEGEVGKLAAKQPEGSLHPIKLFVTHLKARPNTHFTLIRRSQGEAIRQLK ETLSIAEIGKGTGILQLTIESDNRAKAVQIVNEIANTYLQQNVEQKSAESQKTLEFLEKQLPALKEQLETTTNALNDYRI REGSINLDLETQNILTGTVELNTQITLLQQKRDELRQRFTESHPNVVAIDKQISRLQTQIHALDKKIGKLPETQQIILRL SRDVEVNAELYTTLLNHAQTIRVAKAGTVGNVRIVDYAIPPDLPIKPKKTLIMGIALMAGLMLGVIFAFIRRSLSRGVEN PDIIEKSLNIPVYATVQRSRHQKLIEKKLKGKPVAGNHPPIILALENREDLAIESLRSLRTTLHFAFLEARNNILMITGP SPEAGKTFISMNLAAVMADAGKNILLIDGDLRRGDINKSMRTGREKGLSELISQSIDLKDATRSVPQANFHFIPTGAIPP NPSELLLHERFEQILETVNKQYDLIIIDSPPILAATDAAIIGRLASVTLMVVRAGTHPMRELEQSVKKLVLAGVNLKGVI FNGIPETSSRHRYTQYSYQYDYRSKK
Specific function: Probably involved in polymerization and/or export of exopolysaccharide EPS I which functions as a virulence factor. May be involved in an ATP-dependent process in the pathway for EPS I production, possibly export of the trimeric repeat units across the in
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the etk/wzc family [H]
Homologues:
Organism=Escherichia coli, GI87082032, Length=734, Percent_Identity=36.7847411444142, Blast_Score=474, Evalue=1e-134, Organism=Escherichia coli, GI1787216, Length=738, Percent_Identity=36.8563685636856, Blast_Score=465, Evalue=1e-132,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 - InterPro: IPR005700 - InterPro: IPR003856 [H]
Pfam domain/function: PF01656 CbiA; PF02706 Wzz [H]
EC number: 2.7.1.112 [C]
Molecular weight: Translated: 83746; Mature: 83615
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHSLPDMPSDQNSDEIDLGELLDILADNKQLIFIITFITCMIGAAISLLSLPIYKADSL CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCHH LQVRENTQSMVEQLDSLSTFFETKTPVQAEIELIKSRMILGKTIRNLSLDIIATPRFFPF HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHH IGAAAARWFQRFHESGTLSNPPSEWLSHYAWGGEVIQVDTLEIPDNWKNEEIILQSLGEN HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHCCCC RFELIYQNKVILEGEVGKLAAKQPEGSLHPIKLFVTHLKARPNTHFTLIRRSQGEAIRQL CEEEEEECEEEEECCCCCHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH KETLSIAEIGKGTGILQLTIESDNRAKAVQIVNEIANTYLQQNVEQKSAESQKTLEFLEK HHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLPALKEQLETTTNALNDYRIREGSINLDLETQNILTGTVELNTQITLLQQKRDELRQRF HHHHHHHHHHHHHHHHHCCEEECCCEEEEEECCCEEEEEEEECCEEEHHHHHHHHHHHHH TESHPNVVAIDKQISRLQTQIHALDKKIGKLPETQQIILRLSRDVEVNAELYTTLLNHAQ HHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHH TIRVAKAGTVGNVRIVDYAIPPDLPIKPKKTLIMGIALMAGLMLGVIFAFIRRSLSRGVE EEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NPDIIEKSLNIPVYATVQRSRHQKLIEKKLKGKPVAGNHPPIILALENREDLAIESLRSL CHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHH RTTLHFAFLEARNNILMITGPSPEAGKTFISMNLAAVMADAGKNILLIDGDLRRGDINKS HHHHHHHHHCCCCCEEEEECCCCCCCCEEEEHHHHHHHHCCCCEEEEEECCCCCCCCCHH MRTGREKGLSELISQSIDLKDATRSVPQANFHFIPTGAIPPNPSELLLHERFEQILETVN HHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHC KQYDLIIIDSPPILAATDAAIIGRLASVTLMVVRAGTHPMRELEQSVKKLVLAGVNLKGV CCCCEEEECCCCCEEECHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCEE IFNGIPETSSRHRYTQYSYQYDYRSKK EEECCCCCCCCCCEEEEEEEECCCCCC >Mature Secondary Structure THSLPDMPSDQNSDEIDLGELLDILADNKQLIFIITFITCMIGAAISLLSLPIYKADSL CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCHH LQVRENTQSMVEQLDSLSTFFETKTPVQAEIELIKSRMILGKTIRNLSLDIIATPRFFPF HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHH IGAAAARWFQRFHESGTLSNPPSEWLSHYAWGGEVIQVDTLEIPDNWKNEEIILQSLGEN HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHCCCC RFELIYQNKVILEGEVGKLAAKQPEGSLHPIKLFVTHLKARPNTHFTLIRRSQGEAIRQL CEEEEEECEEEEECCCCCHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH KETLSIAEIGKGTGILQLTIESDNRAKAVQIVNEIANTYLQQNVEQKSAESQKTLEFLEK HHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLPALKEQLETTTNALNDYRIREGSINLDLETQNILTGTVELNTQITLLQQKRDELRQRF HHHHHHHHHHHHHHHHHCCEEECCCEEEEEECCCEEEEEEEECCEEEHHHHHHHHHHHHH TESHPNVVAIDKQISRLQTQIHALDKKIGKLPETQQIILRLSRDVEVNAELYTTLLNHAQ HHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHH TIRVAKAGTVGNVRIVDYAIPPDLPIKPKKTLIMGIALMAGLMLGVIFAFIRRSLSRGVE EEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NPDIIEKSLNIPVYATVQRSRHQKLIEKKLKGKPVAGNHPPIILALENREDLAIESLRSL CHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHH RTTLHFAFLEARNNILMITGPSPEAGKTFISMNLAAVMADAGKNILLIDGDLRRGDINKS HHHHHHHHHCCCCCEEEEECCCCCCCCEEEEHHHHHHHHCCCCEEEEEECCCCCCCCCHH MRTGREKGLSELISQSIDLKDATRSVPQANFHFIPTGAIPPNPSELLLHERFEQILETVN HHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHC KQYDLIIIDSPPILAATDAAIIGRLASVTLMVVRAGTHPMRELEQSVKKLVLAGVNLKGV CCCCEEEECCCCCEEECHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCEE IFNGIPETSSRHRYTQYSYQYDYRSKK EEECCCCCCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; a protein tyrosine [C]
Specific reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]