| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is 114332029
Identifier: 114332029
GI number: 114332029
Start: 2180128
End: 2181564
Strand: Direct
Name: 114332029
Synonym: Neut_2063
Alternate gene names: NA
Gene position: 2180128-2181564 (Clockwise)
Preceding gene: 114332028
Following gene: 114332039
Centisome position: 81.93
GC content: 47.53
Gene sequence:
>1437_bases ATGCTGAAAGCCTTATATTCAACTGTACTGCCGCTGACACTGGCAATTACCAATGTTACCGGATTTACCATGCACATGCA GGAAAAAACCACCACACTCCAGGATCAAAAGCAGGTCGGTGTTACGATCTACAATGAAAACCTGGCATTGATCAGGGATC TGCGACAAGTTTCTATGGAACAAGGTATAAACAGGCTGGTTTGGCGTGAAGTTTCAACCCGGATACGTCCACAAACAGTA CTGCTGCGCACACCGGGGCAATCTTCCGAATCCCGGTTGCTGGAACAGAATTTTGATTTTGATCTGCTTACCCCGGAAAA ACTGCTGGAAAGCTATCTCGGACGTACCGTCAATGTTATTTACACTAATCCTGTAACTGGAAAAGAAACAATAGAAGCCG CCACCGTACTCTCCACCCTTGGGGGAGTTATATTGAAATTCACAGATCGTATCGAAACCGGTACTACAGGACGAATCACC TTTCCGGATATCCCCGATCACCTGCATGATCGGCCCACCTTGTCACTGGTACTGGAGAATACTTCTCCAGGAAAACGTGA ACTCGAATTATCCTACCTGACCTCCGGGCTTTCCTGGCAGGCTGACTATGTGGCTAAACTCAATGCCGATGATAGCCGGA TTGATCTTAGTGGATTAATTACGCTGGCCAACCATAGTGGCATTGCGTATCCAGATGCCCATCTGCAGCTGGTGGCCGGG AACATCAATCAGGTTTCCTTCGAGCAACCCCAGACCAGAAAAATGATGGCTATGGTGGCTGATGCCGCCGAATATCAGGA GAGTAAGCAAGAATCCCTGTTTGAATACCATCTCTACACCATGCCTGCCTCCGCAACGCTGGCAGAAAACCAGACAAAAC AGATTACGCTGATGACAGCTGCAGATATTCCGGTCAACAAGGAATTTCTACTGCGTGGTATTGAAGCCCATTACTTCAGC AGATATACCGGCGACGATAACAAACTGAGGCCGGATGTTTTTATCCAGTTTGAGAACAAGGGAAAAGAGCTGGACAAGCC GCTACCTGGAGGAACAGTGCATGTTTACAAAAATGATTCCCAGGGCAATGCGCAATTTCTGGGTGAAGATCGCATTAAGC ACACCGCGAAAAATGAACTCGTTCGTGTGAAGCTGGGTAAAGCTTTCGACATTACAGCCACGAGAACCCAGACGGATTTT CAGCAGCTGGATACTCCTTCTCAACATTTCACTGAAACAGCCCACAAGATTGAAATTCACAACACACGCCAGGAAGCAGT CACCATTCGAGTACAAGAACCCATCCCCGGTGACTGGATAGTAATTTCAGAATCTTTTCCCCATACCAAGCCAGCCGCTA ACCTGGCTGAATGGCAGATCATCATTCCCGACAATGAGAAAATTGTGCTGAGTTACCGGGTCCGGATTAAACATTGA
Upstream 100 bases:
>100_bases CAACTTAAATATCAAAATAGCAGCATGATACGCAATGTATCTAGCTGCAATTTTTCAGGGTCGGACTAACAACAATACTA AAGAATCAGGAAAGAATGAC
Downstream 100 bases:
>100_bases TAAATTCCGTCTGCTGTTTGCATTGTAGGCTGCAGATCTGATTACTCGTCTAAAGGTATTTATTACACCTGATTTCTGAA TTGCAGCAGAAAGTTTCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MLKALYSTVLPLTLAITNVTGFTMHMQEKTTTLQDQKQVGVTIYNENLALIRDLRQVSMEQGINRLVWREVSTRIRPQTV LLRTPGQSSESRLLEQNFDFDLLTPEKLLESYLGRTVNVIYTNPVTGKETIEAATVLSTLGGVILKFTDRIETGTTGRIT FPDIPDHLHDRPTLSLVLENTSPGKRELELSYLTSGLSWQADYVAKLNADDSRIDLSGLITLANHSGIAYPDAHLQLVAG NINQVSFEQPQTRKMMAMVADAAEYQESKQESLFEYHLYTMPASATLAENQTKQITLMTAADIPVNKEFLLRGIEAHYFS RYTGDDNKLRPDVFIQFENKGKELDKPLPGGTVHVYKNDSQGNAQFLGEDRIKHTAKNELVRVKLGKAFDITATRTQTDF QQLDTPSQHFTETAHKIEIHNTRQEAVTIRVQEPIPGDWIVISESFPHTKPAANLAEWQIIIPDNEKIVLSYRVRIKH
Sequences:
>Translated_478_residues MLKALYSTVLPLTLAITNVTGFTMHMQEKTTTLQDQKQVGVTIYNENLALIRDLRQVSMEQGINRLVWREVSTRIRPQTV LLRTPGQSSESRLLEQNFDFDLLTPEKLLESYLGRTVNVIYTNPVTGKETIEAATVLSTLGGVILKFTDRIETGTTGRIT FPDIPDHLHDRPTLSLVLENTSPGKRELELSYLTSGLSWQADYVAKLNADDSRIDLSGLITLANHSGIAYPDAHLQLVAG NINQVSFEQPQTRKMMAMVADAAEYQESKQESLFEYHLYTMPASATLAENQTKQITLMTAADIPVNKEFLLRGIEAHYFS RYTGDDNKLRPDVFIQFENKGKELDKPLPGGTVHVYKNDSQGNAQFLGEDRIKHTAKNELVRVKLGKAFDITATRTQTDF QQLDTPSQHFTETAHKIEIHNTRQEAVTIRVQEPIPGDWIVISESFPHTKPAANLAEWQIIIPDNEKIVLSYRVRIKH >Mature_478_residues MLKALYSTVLPLTLAITNVTGFTMHMQEKTTTLQDQKQVGVTIYNENLALIRDLRQVSMEQGINRLVWREVSTRIRPQTV LLRTPGQSSESRLLEQNFDFDLLTPEKLLESYLGRTVNVIYTNPVTGKETIEAATVLSTLGGVILKFTDRIETGTTGRIT FPDIPDHLHDRPTLSLVLENTSPGKRELELSYLTSGLSWQADYVAKLNADDSRIDLSGLITLANHSGIAYPDAHLQLVAG NINQVSFEQPQTRKMMAMVADAAEYQESKQESLFEYHLYTMPASATLAENQTKQITLMTAADIPVNKEFLLRGIEAHYFS RYTGDDNKLRPDVFIQFENKGKELDKPLPGGTVHVYKNDSQGNAQFLGEDRIKHTAKNELVRVKLGKAFDITATRTQTDF QQLDTPSQHFTETAHKIEIHNTRQEAVTIRVQEPIPGDWIVISESFPHTKPAANLAEWQIIIPDNEKIVLSYRVRIKH
Specific function: Unknown
COG id: COG5316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53956; Mature: 53956
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKALYSTVLPLTLAITNVTGFTMHMQEKTTTLQDQKQVGVTIYNENLALIRDLRQVSME CHHHHHHHHHHHHEEEECCCEEEEEECHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHH QGINRLVWREVSTRIRPQTVLLRTPGQSSESRLLEQNFDFDLLTPEKLLESYLGRTVNVI HHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCEECHHHHHHHHCCCEEEEE YTNPVTGKETIEAATVLSTLGGVILKFTDRIETGTTGRITFPDIPDHLHDRPTLSLVLEN EECCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEECCCCCHHHCCCCEEEEEEEC TSPGKRELELSYLTSGLSWQADYVAKLNADDSRIDLSGLITLANHSGIAYPDAHLQLVAG CCCCCCEEEEEHHHCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCEEEEEEC NINQVSFEQPQTRKMMAMVADAAEYQESKQESLFEYHLYTMPASATLAENQTKQITLMTA CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEECCCCCEEEEEEEE ADIPVNKEFLLRGIEAHYFSRYTGDDNKLRPDVFIQFENKGKELDKPLPGGTVHVYKNDS CCCCCCHHHHHHHHHHHHHEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCC QGNAQFLGEDRIKHTAKNELVRVKLGKAFDITATRTQTDFQQLDTPSQHFTETAHKIEIH CCCCEECCCHHHHHHHHCCEEEEEECCEEEEEECCCCHHHHHCCCCHHHHHHHHHEEEEE NTRQEAVTIRVQEPIPGDWIVISESFPHTKPAANLAEWQIIIPDNEKIVLSYRVRIKH CCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECC >Mature Secondary Structure MLKALYSTVLPLTLAITNVTGFTMHMQEKTTTLQDQKQVGVTIYNENLALIRDLRQVSME CHHHHHHHHHHHHEEEECCCEEEEEECHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHH QGINRLVWREVSTRIRPQTVLLRTPGQSSESRLLEQNFDFDLLTPEKLLESYLGRTVNVI HHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCEECHHHHHHHHCCCEEEEE YTNPVTGKETIEAATVLSTLGGVILKFTDRIETGTTGRITFPDIPDHLHDRPTLSLVLEN EECCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEECCCCCHHHCCCCEEEEEEEC TSPGKRELELSYLTSGLSWQADYVAKLNADDSRIDLSGLITLANHSGIAYPDAHLQLVAG CCCCCCEEEEEHHHCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCEEEEEEC NINQVSFEQPQTRKMMAMVADAAEYQESKQESLFEYHLYTMPASATLAENQTKQITLMTA CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEECCCCCEEEEEEEE ADIPVNKEFLLRGIEAHYFSRYTGDDNKLRPDVFIQFENKGKELDKPLPGGTVHVYKNDS CCCCCCHHHHHHHHHHHHHEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCC QGNAQFLGEDRIKHTAKNELVRVKLGKAFDITATRTQTDFQQLDTPSQHFTETAHKIEIH CCCCEECCCHHHHHHHHCCEEEEEECCEEEEEECCCCHHHHHCCCCHHHHHHHHHEEEEE NTRQEAVTIRVQEPIPGDWIVISESFPHTKPAANLAEWQIIIPDNEKIVLSYRVRIKH CCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA