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The map label for this gene is scpB [H]

Identifier: 114332010

GI number: 114332010

Start: 2160369

End: 2161019

Strand: Direct

Name: scpB [H]

Synonym: Neut_2044

Alternate gene names: 114332010

Gene position: 2160369-2161019 (Clockwise)

Preceding gene: 114332009

Following gene: 114332011

Centisome position: 81.18

GC content: 45.47

Gene sequence:

>651_bases
ATGTCCACACCTGCCATTCTGACCGAGCCAATTGAAGCGAACCTGGTTCTTTCGCTGAATGATCAGGTCGTCAGGGTTGT
TGAAGCCGCATTGTTAACCACGTCTGAGCCTTTGACCATTAATGATCTCAAGAAACTCTTTGAGGGTAATATTGATAAAA
AAATGCTGCATGAATCCCTGACAATCCTGGATGAGAAATGGTGTAACAGCGGAATAGAATTGGTTTTAGTTGCTGGAGGC
TGGCGTTTCCAAAGCAAGCCTGAAATGCAAATTTTCCTGGATCGACTTAACCCACAAAGGCCACCCCGTTATTCGCGTGC
AGTAATGGAAACATTAGCCATCATCGCCTACCGACAACCCGTCACCCGTGGAGATATTGAAGAAATCCGGGGGGTAGCGG
TTTCTACACAAGTTATTAAAACCCTGGAATCACGCGGCTGGATTGAAACTATTGGGCAACGCGAGATACCGGGCAAGCCT
TATCTTTATGCAACCACCCGGCATTTTCTTGATGATCTGAATTTGCAATCGCTGGAACAGCTGCCCTCCCTGGAAAATTT
TAATTCCCTGAATATATCTGCAGAGGAAAAGTTAAACGATCAGAGAATAGATCAAGAGTCCGGCGAGTCCAGCATTCATG
AGTCAATATAA

Upstream 100 bases:

>100_bases
TCCAATATTCATAAACTTGTAGCCAGTTTCCTTGCGTTGCTGGAGCTGGCCCGGGAAGCGCTGGTTGATATTGTTCAATC
AGATCGCTTTGGAACAATTT

Downstream 100 bases:

>100_bases
TTTTTTAACTTCTTGGAGACACGATGTATCAACATATCAAGGTACCGGCCATCGGCAGCAAAATTCAGGTAAAAAATGAC
TCTACCCTGATCGTACCAGA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSTPAILTEPIEANLVLSLNDQVVRVVEAALLTTSEPLTINDLKKLFEGNIDKKMLHESLTILDEKWCNSGIELVLVAGG
WRFQSKPEMQIFLDRLNPQRPPRYSRAVMETLAIIAYRQPVTRGDIEEIRGVAVSTQVIKTLESRGWIETIGQREIPGKP
YLYATTRHFLDDLNLQSLEQLPSLENFNSLNISAEEKLNDQRIDQESGESSIHESI

Sequences:

>Translated_216_residues
MSTPAILTEPIEANLVLSLNDQVVRVVEAALLTTSEPLTINDLKKLFEGNIDKKMLHESLTILDEKWCNSGIELVLVAGG
WRFQSKPEMQIFLDRLNPQRPPRYSRAVMETLAIIAYRQPVTRGDIEEIRGVAVSTQVIKTLESRGWIETIGQREIPGKP
YLYATTRHFLDDLNLQSLEQLPSLENFNSLNISAEEKLNDQRIDQESGESSIHESI
>Mature_215_residues
STPAILTEPIEANLVLSLNDQVVRVVEAALLTTSEPLTINDLKKLFEGNIDKKMLHESLTILDEKWCNSGIELVLVAGGW
RFQSKPEMQIFLDRLNPQRPPRYSRAVMETLAIIAYRQPVTRGDIEEIRGVAVSTQVIKTLESRGWIETIGQREIPGKPY
LYATTRHFLDDLNLQSLEQLPSLENFNSLNISAEEKLNDQRIDQESGESSIHESI

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 24455; Mature: 24324

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPAILTEPIEANLVLSLNDQVVRVVEAALLTTSEPLTINDLKKLFEGNIDKKMLHESL
CCCCCCEECCCCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHH
TILDEKWCNSGIELVLVAGGWRFQSKPEMQIFLDRLNPQRPPRYSRAVMETLAIIAYRQP
HHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
VTRGDIEEIRGVAVSTQVIKTLESRGWIETIGQREIPGKPYLYATTRHFLDDLNLQSLEQ
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEHHHHHHHCCCHHHHHH
LPSLENFNSLNISAEEKLNDQRIDQESGESSIHESI
CCCCCCCCCCCCCHHHHCCHHHCCHHCCHHHHHHCC
>Mature Secondary Structure 
STPAILTEPIEANLVLSLNDQVVRVVEAALLTTSEPLTINDLKKLFEGNIDKKMLHESL
CCCCCEECCCCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHH
TILDEKWCNSGIELVLVAGGWRFQSKPEMQIFLDRLNPQRPPRYSRAVMETLAIIAYRQP
HHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
VTRGDIEEIRGVAVSTQVIKTLESRGWIETIGQREIPGKPYLYATTRHFLDDLNLQSLEQ
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEHHHHHHHCCCHHHHHH
LPSLENFNSLNISAEEKLNDQRIDQESGESSIHESI
CCCCCCCCCCCCCHHHHCCHHHCCHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]