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The map label for this gene is 114331820

Identifier: 114331820

GI number: 114331820

Start: 1955145

End: 1956065

Strand: Reverse

Name: 114331820

Synonym: Neut_1844

Alternate gene names: NA

Gene position: 1956065-1955145 (Counterclockwise)

Preceding gene: 114331821

Following gene: 114331819

Centisome position: 73.51

GC content: 47.77

Gene sequence:

>921_bases
GTGCGTCGAGCGATACAAAATAGTCAAGAGAGTCTGAATGTTCTGGCCAAGCGGCATGGGATTAATCCAAAAACGGTAGC
GAAGTGGCGGAAGCGGGAATTCACCCACGATGCACCGATGGGCCCCAAAGAGTCGCACTCGACTGTTTTAAGTCTGGAAG
AAGAAGCCGCTGTTGTGGCGTTTCGCAAACATACGCTTCTACCGCTGGATGATTGTCTATATGCCTTGCAACCAAGCATT
CCGCATTTAACCCGCTCAAGCCTGCATCGCTGCTTTCAACGGCATGGCATCAGTCGGTTGCCGGAGGCTGATGGTGACAA
GCCAAAGAAAAAGTTTAATGCCTATCCAATTGGCTACTTCCATATTGATATTGCCGAAGTTCGTACGAAGGAAGGTAAAC
TCTATCTTTTTGTAGCCATTGACCGGACATCAAAGTTCGTTTTTGTTCAACTCCAGAACAAAGCCAACCGCAACACGGCA
ACCGCCTTCTTGAAGGCCGTGATCGAGACTGTTCCCTACAAGATCCATACAATCCTGACTGATAACGGTATCCAGTTTAC
GTTCCCGGCGCGTTATCGGAATGGGCCAACGGCTCAGTATGTAACGCATATGTTCGATAGGTGTTGTCAGATCAACGGCA
TCGAGCACCGTCTCACCAAACCCAACCATCCCTGGACCAATGGTCAGGTTGAACGCATGAATCGAACCATCAAGGATGCG
ACTGTAAAACGGTATTATTACGACTCACACGATCAGTTGAAGGCCCATCTCCATCGCTTTGTGATGGCTTATAACTTCGC
CAAAAGACTAAAAGCTCTCAAAGGCCTAACACCCTATGAATACATCTGCAAAATCTGGAAAAATGAGCCAGATCGTTTTA
TCTTTGATCCATTCCAGCACACCGTGGGACTAAACACTTAG

Upstream 100 bases:

>100_bases
GATGTTTAGTCCCACGGTGTGCCGGTGTAACATATAACCAGCTACGGAGGGATGATTTATGGGACAGATATTACACGGAA
GCGCCCGCACGACAGTGGCG

Downstream 100 bases:

>100_bases
AACCTGTTCAATATCTCACTGAAGGGCGCATTGCGGTGTTGAAATTGAACTCAAAATGCTCACATACTTCAAGTATGCTC
CGCTTTCTCGTTCAATTTTG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; Transcriptional Regulator; Integrase; Integrase Catalytic Domain-Containing Protein; Integrase Protein; Integrase Catalytic Core; Fis Family Transcriptional Regulator; Transposase And Inactivated Derivatives; ISKpn8 Transposase; LOW QUALITY PROTEIN Integrase Catalytic Subunit; Transposase For ISMyma; Hypothethical Protein Transposase; Instegrase; Noncomposite Transposon Transposase; Transposase Of

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MRRAIQNSQESLNVLAKRHGINPKTVAKWRKREFTHDAPMGPKESHSTVLSLEEEAAVVAFRKHTLLPLDDCLYALQPSI
PHLTRSSLHRCFQRHGISRLPEADGDKPKKKFNAYPIGYFHIDIAEVRTKEGKLYLFVAIDRTSKFVFVQLQNKANRNTA
TAFLKAVIETVPYKIHTILTDNGIQFTFPARYRNGPTAQYVTHMFDRCCQINGIEHRLTKPNHPWTNGQVERMNRTIKDA
TVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPYEYICKIWKNEPDRFIFDPFQHTVGLNT

Sequences:

>Translated_306_residues
MRRAIQNSQESLNVLAKRHGINPKTVAKWRKREFTHDAPMGPKESHSTVLSLEEEAAVVAFRKHTLLPLDDCLYALQPSI
PHLTRSSLHRCFQRHGISRLPEADGDKPKKKFNAYPIGYFHIDIAEVRTKEGKLYLFVAIDRTSKFVFVQLQNKANRNTA
TAFLKAVIETVPYKIHTILTDNGIQFTFPARYRNGPTAQYVTHMFDRCCQINGIEHRLTKPNHPWTNGQVERMNRTIKDA
TVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPYEYICKIWKNEPDRFIFDPFQHTVGLNT
>Mature_306_residues
MRRAIQNSQESLNVLAKRHGINPKTVAKWRKREFTHDAPMGPKESHSTVLSLEEEAAVVAFRKHTLLPLDDCLYALQPSI
PHLTRSSLHRCFQRHGISRLPEADGDKPKKKFNAYPIGYFHIDIAEVRTKEGKLYLFVAIDRTSKFVFVQLQNKANRNTA
TAFLKAVIETVPYKIHTILTDNGIQFTFPARYRNGPTAQYVTHMFDRCCQINGIEHRLTKPNHPWTNGQVERMNRTIKDA
TVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPYEYICKIWKNEPDRFIFDPFQHTVGLNT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35636; Mature: 35636

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRAIQNSQESLNVLAKRHGINPKTVAKWRKREFTHDAPMGPKESHSTVLSLEEEAAVVA
CCCHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHEEE
FRKHTLLPLDDCLYALQPSIPHLTRSSLHRCFQRHGISRLPEADGDKPKKKFNAYPIGYF
ECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCEEEE
HIDIAEVRTKEGKLYLFVAIDRTSKFVFVQLQNKANRNTATAFLKAVIETVPYKIHTILT
EEEHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEEEE
DNGIQFTFPARYRNGPTAQYVTHMFDRCCQINGIEHRLTKPNHPWTNGQVERMNRTIKDA
CCCEEEEECHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHHH
TVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPYEYICKIWKNEPDRFIFDPFQH
HHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEECCHHH
TVGLNT
HCCCCC
>Mature Secondary Structure
MRRAIQNSQESLNVLAKRHGINPKTVAKWRKREFTHDAPMGPKESHSTVLSLEEEAAVVA
CCCHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHEEE
FRKHTLLPLDDCLYALQPSIPHLTRSSLHRCFQRHGISRLPEADGDKPKKKFNAYPIGYF
ECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCEEEE
HIDIAEVRTKEGKLYLFVAIDRTSKFVFVQLQNKANRNTATAFLKAVIETVPYKIHTILT
EEEHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEEEE
DNGIQFTFPARYRNGPTAQYVTHMFDRCCQINGIEHRLTKPNHPWTNGQVERMNRTIKDA
CCCEEEEECHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHHH
TVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPYEYICKIWKNEPDRFIFDPFQH
HHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEECCHHH
TVGLNT
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA