| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is 114331784
Identifier: 114331784
GI number: 114331784
Start: 1917527
End: 1918651
Strand: Reverse
Name: 114331784
Synonym: Neut_1807
Alternate gene names: NA
Gene position: 1918651-1917527 (Counterclockwise)
Preceding gene: 114331786
Following gene: 114331783
Centisome position: 72.1
GC content: 48.89
Gene sequence:
>1125_bases ATGCAAATAAAAGCTGATATGGCACTGAAGAAATCTTTTGATATCCATTTTGGCATGCTGACAGGTACCTCCCGAATGTT AGGGGTGGATATCGGCGCTTCCTCAATTAAGCTAGTGGAATTATCCAGAAAAAGTGGAGCGCCAGAATCCTATCGTTTGG AACGCTATGTTATCGAACCATTGCCGATGGATGCTCTGCAAGATGGAGGTATTAACCAGATTGAACAGGTGAGTGACAGT CTCCAGCATGCCCTGAAACGAATGGGAACGCGACAGAGGAAAATTGTTATGGCTCTGCCGCTGACATCGGTTATTACAAA GAGAATCAACGTACCTGCAGGTTTGCGGGAGGATGATCTGGTGTTTCAGGTTGAAACAGAAGCCAATCAGTATGTGCCGT TTGCAATGGATGAAGTCAATCTTGATTTTCAGGTGATTGGACCGGCTCCAGATTGTCCGGAAGAAGTGGAGGTGTTGTTG GCGGCTGCTCGTAAAGACAAAGTGGAAGATCGTGTGGCAACAGCAATGTCTGCCGGCCTGAAGGTAATGGTGATGGATAT CGAGCAATTTGCTGCCCAGGCTATTTCTTCCAGAGCGATTGGCAGTCAGCTGCCGGATGGGGGAAAAGATAAGGTGGTTG CGCTCATTGATATTGGCGCGAGCGTCACGCGGATCAATGTGCTGTTAAATGATACCTCTATCTATATGCGGGATTTATCC TTTGGTGGAAATCAGCTAACGCAAGAAATCCAGAATCAGTTCAATCTCTCTCCGGAAGAAGCCGAGACAGCCAAGCGCAA CGGTAAGCTGCCGGAGAGTTATCAAAATGAGGTATTGCGGCCTTTTTGTGAAACGGCTGCGCTGGAGGTGGCTCGAGCCA TACAGCTTTTTTATACTTCCACTCAACATACTCAGGTTGACTATATCTCCTTGTCAGGCGGGTGTGCAGTGATCCCAGGT CTTGAGGAAATCGTATCTGAACGTACCGGGGTGATTACCCAGGTGATTAATCCGTTTTCCGGCATGGAGTTATCCGGCCG GATTGCACCGCGGCAGCTGAAGATGGATGCCGCGGTGTTGCTGACTGCCAGCGGCCTGGCTATGCGAGGATTTGATCCAT CATGA
Upstream 100 bases:
>100_bases TATCAACTGTTATTGCATGAATTGATTTTTTCACTTACCTGTCAGAATCGGCTTCAGTTGAAGTATTGCATCCGAATAAA AATCTTCTGGTCGAAACATT
Downstream 100 bases:
>100_bases TACGTATTAATCTGCTTCCACATCGTGAACTTAAGCGTAAGGCGCTTCAGCAACAGTTTGCCGTACTGGCAGGTCTTACT GTTGGCCTGGGAGTGCTGAT
Product: type IV pilus assembly protein PilM
Products: NA
Alternate protein names: Type IV Pilus Biogenesis Protein PilM; Tfp Pilus Assembly Protein ATPase PilM; Type 4 Fimbrial Biogenesis Protein PilM; Fimbrial Assembly Protein PilM; Tfp Pilus Assembly Protein ATPase PilM-Like Protein; Tfp Pilus Assembly Protein; Type IV Pilus Assembly Protein; Fimbrial Assembly Membrane Protein; Type Iv Pilus Assembly Protein Pilm; Type IV Pili Biogenesis Protein PilM; Fimbrial Assembly Family Protein; Fimbrial Assembly Protein; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Protein FtsA; Type IV Fimbrial Biogenesis Protein PilM; PilM Type IV Pilus Assembly Protein; Tfp Pilus Assembly Protein ATPase PilM-Like Protein Protein; Pili Assembly Protein PilM; Type IV Pilus Biogenesis Protein TapM; Type IV Pilus Assembly Protein ATPase PilM; Type 4 Fimbrial Biogenesis Protein; Pili Assembly Protein; Competence Protein PilM; Type IV Pilus Biogenesis ATPase PilM
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MQIKADMALKKSFDIHFGMLTGTSRMLGVDIGASSIKLVELSRKSGAPESYRLERYVIEPLPMDALQDGGINQIEQVSDS LQHALKRMGTRQRKIVMALPLTSVITKRINVPAGLREDDLVFQVETEANQYVPFAMDEVNLDFQVIGPAPDCPEEVEVLL AAARKDKVEDRVATAMSAGLKVMVMDIEQFAAQAISSRAIGSQLPDGGKDKVVALIDIGASVTRINVLLNDTSIYMRDLS FGGNQLTQEIQNQFNLSPEEAETAKRNGKLPESYQNEVLRPFCETAALEVARAIQLFYTSTQHTQVDYISLSGGCAVIPG LEEIVSERTGVITQVINPFSGMELSGRIAPRQLKMDAAVLLTASGLAMRGFDPS
Sequences:
>Translated_374_residues MQIKADMALKKSFDIHFGMLTGTSRMLGVDIGASSIKLVELSRKSGAPESYRLERYVIEPLPMDALQDGGINQIEQVSDS LQHALKRMGTRQRKIVMALPLTSVITKRINVPAGLREDDLVFQVETEANQYVPFAMDEVNLDFQVIGPAPDCPEEVEVLL AAARKDKVEDRVATAMSAGLKVMVMDIEQFAAQAISSRAIGSQLPDGGKDKVVALIDIGASVTRINVLLNDTSIYMRDLS FGGNQLTQEIQNQFNLSPEEAETAKRNGKLPESYQNEVLRPFCETAALEVARAIQLFYTSTQHTQVDYISLSGGCAVIPG LEEIVSERTGVITQVINPFSGMELSGRIAPRQLKMDAAVLLTASGLAMRGFDPS >Mature_374_residues MQIKADMALKKSFDIHFGMLTGTSRMLGVDIGASSIKLVELSRKSGAPESYRLERYVIEPLPMDALQDGGINQIEQVSDS LQHALKRMGTRQRKIVMALPLTSVITKRINVPAGLREDDLVFQVETEANQYVPFAMDEVNLDFQVIGPAPDCPEEVEVLL AAARKDKVEDRVATAMSAGLKVMVMDIEQFAAQAISSRAIGSQLPDGGKDKVVALIDIGASVTRINVLLNDTSIYMRDLS FGGNQLTQEIQNQFNLSPEEAETAKRNGKLPESYQNEVLRPFCETAALEVARAIQLFYTSTQHTQVDYISLSGGCAVIPG LEEIVSERTGVITQVINPFSGMELSGRIAPRQLKMDAAVLLTASGLAMRGFDPS
Specific function: Unknown
COG id: COG4972
COG function: function code NU; Tfp pilus assembly protein, ATPase PilM
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40806; Mature: 40806
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIKADMALKKSFDIHFGMLTGTSRMLGVDIGASSIKLVELSRKSGAPESYRLERYVIEP CCCCCCHHHHHCCCEEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEECC LPMDALQDGGINQIEQVSDSLQHALKRMGTRQRKIVMALPLTSVITKRINVPAGLREDDL CCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHCCCCCCCCCCCE VFQVETEANQYVPFAMDEVNLDFQVIGPAPDCPEEVEVLLAAARKDKVEDRVATAMSAGL EEEEECCCCCCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC KVMVMDIEQFAAQAISSRAIGSQLPDGGKDKVVALIDIGASVTRINVLLNDTSIYMRDLS EEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEEECCEEEEEECC FGGNQLTQEIQNQFNLSPEEAETAKRNGKLPESYQNEVLRPFCETAALEVARAIQLFYTS CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TQHTQVDYISLSGGCAVIPGLEEIVSERTGVITQVINPFSGMELSGRIAPRQLKMDAAVL CCCCEEEEEEECCCEEECCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHCCCEEEE LTASGLAMRGFDPS EEECCCEECCCCCC >Mature Secondary Structure MQIKADMALKKSFDIHFGMLTGTSRMLGVDIGASSIKLVELSRKSGAPESYRLERYVIEP CCCCCCHHHHHCCCEEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEECC LPMDALQDGGINQIEQVSDSLQHALKRMGTRQRKIVMALPLTSVITKRINVPAGLREDDL CCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHCCCCCCCCCCCE VFQVETEANQYVPFAMDEVNLDFQVIGPAPDCPEEVEVLLAAARKDKVEDRVATAMSAGL EEEEECCCCCCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC KVMVMDIEQFAAQAISSRAIGSQLPDGGKDKVVALIDIGASVTRINVLLNDTSIYMRDLS EEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEEECCEEEEEECC FGGNQLTQEIQNQFNLSPEEAETAKRNGKLPESYQNEVLRPFCETAALEVARAIQLFYTS CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TQHTQVDYISLSGGCAVIPGLEEIVSERTGVITQVINPFSGMELSGRIAPRQLKMDAAVL CCCCEEEEEEECCCEEECCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHCCCEEEE LTASGLAMRGFDPS EEECCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA