Click here to switch to the map view.

The map label for this gene is 114331733

Identifier: 114331733

GI number: 114331733

Start: 1857796

End: 1858272

Strand: Reverse

Name: 114331733

Synonym: Neut_1756

Alternate gene names: NA

Gene position: 1858272-1857796 (Counterclockwise)

Preceding gene: 114331734

Following gene: 114331731

Centisome position: 69.83

GC content: 56.81

Gene sequence:

>477_bases
ATGACGCGACAGCGGGGTCGCGCGCCGCGCGGCCAGCGCTGTGTGGCTTCAGTACCCCACGGCCACTGGAAGAGCACCAC
CTTCATTGCGGGACTGCATCACGATGCGATCACCGCTCCGTTAGTGCTCGACGGCCCAATGAACGGGGCCGCGTTTCTCG
CCTATATTCATCAAACCTGCCTGTGCCCCACGCTGCAGCCAGGTGACATTGTGGTGGCCGACAACCTGTCTTGTCACAAG
GTTCCAGGCGTCCGCGCAGCCATTGAAGCGGCAGGTGCCACGCTGCTCTACTTACCGCCGTATTCGCCTGATCTGAATCC
AATCGAGAAAATGTTCTCCAAACTCAAAGCCCTATTACGCAAAGCCGCCAAACGAACCATGGATGCCTTATGGGCACAGA
TCGGCAAAGTGTTGGATCTGTTCACTCCGGAGGAGTGTGCCAACTACTTCGCTTCATGTGGATATGTAAACAAGTAA

Upstream 100 bases:

>100_bases
CACAGACGTACGTCAGGCACGAACTGAGTGGGCCCGCGAGCAACAGCATTGGGATTGCCGTCACCTGGTCTTCCTGGATG
AGACGGCAACGACCACCAAC

Downstream 100 bases:

>100_bases
GCCAAAAATGCTCTAGAGAGCAGAAAACAATATTGCCTTATTTATATACTTTATATGCTATGATTACCCTTGGTTTGCTA
AAGTATTGTTAGTGTATTGT

Product: ISRm2011-2 transposase protein

Products: NA

Alternate protein names: Transposase Of Insertion Sequence; Transposase And Inactivated Derivatives-Like Protein; ISSpo6 Transposase OrfB; LOW QUALITY PROTEIN Transposase; Insertion Sequence Transposase Protein; Transposase For Insertion Sequence Element; Transposase IS; ISSoc4 Transposase OrfAB; Transposase And Inactivated Derivative; Transposase Fragment

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MTRQRGRAPRGQRCVASVPHGHWKSTTFIAGLHHDAITAPLVLDGPMNGAAFLAYIHQTCLCPTLQPGDIVVADNLSCHK
VPGVRAAIEAAGATLLYLPPYSPDLNPIEKMFSKLKALLRKAAKRTMDALWAQIGKVLDLFTPEECANYFASCGYVNK

Sequences:

>Translated_158_residues
MTRQRGRAPRGQRCVASVPHGHWKSTTFIAGLHHDAITAPLVLDGPMNGAAFLAYIHQTCLCPTLQPGDIVVADNLSCHK
VPGVRAAIEAAGATLLYLPPYSPDLNPIEKMFSKLKALLRKAAKRTMDALWAQIGKVLDLFTPEECANYFASCGYVNK
>Mature_157_residues
TRQRGRAPRGQRCVASVPHGHWKSTTFIAGLHHDAITAPLVLDGPMNGAAFLAYIHQTCLCPTLQPGDIVVADNLSCHKV
PGVRAAIEAAGATLLYLPPYSPDLNPIEKMFSKLKALLRKAAKRTMDALWAQIGKVLDLFTPEECANYFASCGYVNK

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17171; Mature: 17040

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRQRGRAPRGQRCVASVPHGHWKSTTFIAGLHHDAITAPLVLDGPMNGAAFLAYIHQTC
CCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHH
LCPTLQPGDIVVADNLSCHKVPGVRAAIEAAGATLLYLPPYSPDLNPIEKMFSKLKALLR
CCCCCCCCCEEEECCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
KAAKRTMDALWAQIGKVLDLFTPEECANYFASCGYVNK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TRQRGRAPRGQRCVASVPHGHWKSTTFIAGLHHDAITAPLVLDGPMNGAAFLAYIHQTC
CCCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHH
LCPTLQPGDIVVADNLSCHKVPGVRAAIEAAGATLLYLPPYSPDLNPIEKMFSKLKALLR
CCCCCCCCCEEEECCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
KAAKRTMDALWAQIGKVLDLFTPEECANYFASCGYVNK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA