| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is frmB [H]
Identifier: 114331377
GI number: 114331377
Start: 1457067
End: 1457936
Strand: Direct
Name: frmB [H]
Synonym: Neut_1386
Alternate gene names: 114331377
Gene position: 1457067-1457936 (Clockwise)
Preceding gene: 114331376
Following gene: 114331379
Centisome position: 54.76
GC content: 49.2
Gene sequence:
>870_bases ATGACAATCAAACTGGAAATTCGCAGCCAGCACCGCTGTTTTGGTGGTCTTCAAAGTTATTATCAGCATCATTCAGAAAT TATCGGCTTACCGATGCGCTTCTCAGTGTATGTGCCGCCCGAAGCCGGTGAGCAGCGTTTACCCGTACTGTTTTTTCTAG CCGGGCTGACCTGTACAGAAGAAACTTTCATGATTAAGGCCGGTGCACAACGTTATGCTGCCGAGCTCGGGCTGATGCTG GTCAGTATGGATACCAGCCCACGCAATACCGGCATTCCTGGTGAAGCGGATGATTGGGAATTTGGATCAGGCGCCGGGTT CTATCTTGATGCCATAGAATCCCCCTGGTCCAAATACTTTCACATGGAAAGCTATGTGACACAAGAGCTGTACAACATCA TACTGGGTCAATTTCCAGTTGATCCGAAAAGTGTGGGAATTTCAGGACATTCAATGGGAGGACATGGTGCGTTAACCCTG GCGTTACGCCACCCTGAGCTGTACCAGTCAGTTTCTGCCTTTGCGCCGATAGCAGCCCCCATTCACTGCCCTTGGGGACA AAAGGCATTCAGTCGTTACCTGGGGAAATCGCCAGAAAGCTGGCATAAACACGATGCAACCGCTCTGATCGAATCTGGTC ACCGACTACCAACCCCGTTAATTGATCAGGGACTAGACGATCCTTTTCTTGCTGAGCAATTACATCCCAGCTATTTTGAA GCCGCCTGTCAGCAAGCTGAACAGCCCATTATTTTGCGTCGCCATGCTGGCTATGATCACAGCTACTTTTTTATCAGCAC TTTTATTGAAGATCATTTGCGACATCACCACACTTTCCTGACGTTGGATCCGGCTGATTCAGCAGGTTGA
Upstream 100 bases:
>100_bases TACACACACCCTGAAACTGGAAGACATCAACGAAGGTTTCAAATTGATGGAAGCCGGAAAATCTATTCGTTCTGTTGTAA TTTACTGATGACTTAAAAAA
Downstream 100 bases:
>100_bases TTCAATCTGGATTTTCTTGCTATATCTCATCGTCATTGTGCGACAGCGACAACCTCTCCCTCTCGCCTTTTCGAGCATGT TCGTGCGAAGCAATCCAGAG
Product: carboxylesterase
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MTIKLEIRSQHRCFGGLQSYYQHHSEIIGLPMRFSVYVPPEAGEQRLPVLFFLAGLTCTEETFMIKAGAQRYAAELGLML VSMDTSPRNTGIPGEADDWEFGSGAGFYLDAIESPWSKYFHMESYVTQELYNIILGQFPVDPKSVGISGHSMGGHGALTL ALRHPELYQSVSAFAPIAAPIHCPWGQKAFSRYLGKSPESWHKHDATALIESGHRLPTPLIDQGLDDPFLAEQLHPSYFE AACQQAEQPIILRRHAGYDHSYFFISTFIEDHLRHHHTFLTLDPADSAG
Sequences:
>Translated_289_residues MTIKLEIRSQHRCFGGLQSYYQHHSEIIGLPMRFSVYVPPEAGEQRLPVLFFLAGLTCTEETFMIKAGAQRYAAELGLML VSMDTSPRNTGIPGEADDWEFGSGAGFYLDAIESPWSKYFHMESYVTQELYNIILGQFPVDPKSVGISGHSMGGHGALTL ALRHPELYQSVSAFAPIAAPIHCPWGQKAFSRYLGKSPESWHKHDATALIESGHRLPTPLIDQGLDDPFLAEQLHPSYFE AACQQAEQPIILRRHAGYDHSYFFISTFIEDHLRHHHTFLTLDPADSAG >Mature_288_residues TIKLEIRSQHRCFGGLQSYYQHHSEIIGLPMRFSVYVPPEAGEQRLPVLFFLAGLTCTEETFMIKAGAQRYAAELGLMLV SMDTSPRNTGIPGEADDWEFGSGAGFYLDAIESPWSKYFHMESYVTQELYNIILGQFPVDPKSVGISGHSMGGHGALTLA LRHPELYQSVSAFAPIAAPIHCPWGQKAFSRYLGKSPESWHKHDATALIESGHRLPTPLIDQGLDDPFLAEQLHPSYFEA ACQQAEQPIILRRHAGYDHSYFFISTFIEDHLRHHHTFLTLDPADSAG
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=282, Percent_Identity=51.4184397163121, Blast_Score=304, Evalue=5e-83, Organism=Escherichia coli, GI1786551, Length=278, Percent_Identity=45.3237410071942, Blast_Score=278, Evalue=3e-76, Organism=Escherichia coli, GI1788477, Length=279, Percent_Identity=48.7455197132617, Blast_Score=265, Evalue=3e-72, Organism=Caenorhabditis elegans, GI17510185, Length=277, Percent_Identity=44.043321299639, Blast_Score=238, Evalue=2e-63, Organism=Saccharomyces cerevisiae, GI6322393, Length=298, Percent_Identity=34.2281879194631, Blast_Score=169, Evalue=4e-43, Organism=Drosophila melanogaster, GI45551932, Length=284, Percent_Identity=51.056338028169, Blast_Score=281, Evalue=3e-76, Organism=Drosophila melanogaster, GI24648347, Length=283, Percent_Identity=51.2367491166078, Blast_Score=281, Evalue=5e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 32333; Mature: 32202
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKLEIRSQHRCFGGLQSYYQHHSEIIGLPMRFSVYVPPEAGEQRLPVLFFLAGLTCTE CEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHEECCCCCCC ETFMIKAGAQRYAAELGLMLVSMDTSPRNTGIPGEADDWEFGSGAGFYLDAIESPWSKYF CEEEEECCHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHCHHHHHH HMESYVTQELYNIILGQFPVDPKSVGISGHSMGGHGALTLALRHPELYQSVSAFAPIAAP HHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHCCCCCC IHCPWGQKAFSRYLGKSPESWHKHDATALIESGHRLPTPLIDQGLDDPFLAEQLHPSYFE EECCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHCCHHHHH AACQQAEQPIILRRHAGYDHSYFFISTFIEDHLRHHHTFLTLDPADSAG HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCC >Mature Secondary Structure TIKLEIRSQHRCFGGLQSYYQHHSEIIGLPMRFSVYVPPEAGEQRLPVLFFLAGLTCTE EEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHEECCCCCCC ETFMIKAGAQRYAAELGLMLVSMDTSPRNTGIPGEADDWEFGSGAGFYLDAIESPWSKYF CEEEEECCHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHCHHHHHH HMESYVTQELYNIILGQFPVDPKSVGISGHSMGGHGALTLALRHPELYQSVSAFAPIAAP HHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHCCCCCC IHCPWGQKAFSRYLGKSPESWHKHDATALIESGHRLPTPLIDQGLDDPFLAEQLHPSYFE EECCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHCCHHHHH AACQQAEQPIILRRHAGYDHSYFFISTFIEDHLRHHHTFLTLDPADSAG HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA