Click here to switch to the map view.

The map label for this gene is cvpA [H]

Identifier: 114331155

GI number: 114331155

Start: 1196996

End: 1197490

Strand: Direct

Name: cvpA [H]

Synonym: Neut_1157

Alternate gene names: 114331155

Gene position: 1196996-1197490 (Clockwise)

Preceding gene: 114331154

Following gene: 114331156

Centisome position: 44.98

GC content: 47.07

Gene sequence:

>495_bases
ATGACGATTTTCGACTACATTGTTATCGGAATCATATCTTTCTCAGCTTTATTGAGTGTCACGCGCGGACTGGTACATGA
AATCGTATCCCTTCTTGCCTGGATAATTGCCTTCTTTGTTGCCAGTCGTTATTCAATAAATGCCGCCCCCTTGTTATCAG
ACTGGATCGTGAATGAATCCATTCGCATGTTGACAGCTTTCAGTGTGATGTTTTTTGTTGTTCTTCTGGTAACAATGCTC
GCATCCAGGCTGCTATCTGTTCTGGTGAGGGGAGTAGGGCTGGGCCTGATAGACAGAATGCTGGGCGCGCTGTTCGGAAT
CGTGCGTGGATTGGTGATCATATTGTTTCTGATAACAGCAGCCGGCTTTACTCCACTTCCACAACAACCCTTCTGGCAGC
AGGCGGTATTGAGTGAACCCCTGGAAATAATGGCGGCTGACGTAATCCCCTGGTTGCCCCAGGATTTCAGGAATCTTATT
GGTTTTGCCAAGTAA

Upstream 100 bases:

>100_bases
TGACTCGTGTACGGATCGGACCTTTTCCTACGCGAGAAGCTGCTGAAGCAGAGCATGAACGGTTGAAAAAAATTGGATTG
AGTGGTGTAGTGACAACCAG

Downstream 100 bases:

>100_bases
TTTAAGTTCAGGCTTGACTATATTGAAATTTCGTATCTTGTAATTAATACAGATATGAACTGCTAGTTTTACAGGTTTTT
TAATCCACTTTTTCAGCGAG

Product: colicin V production protein

Products: NA

Alternate protein names: Protein dedE; Pur regulon 18 kDa protein [H]

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MTIFDYIVIGIISFSALLSVTRGLVHEIVSLLAWIIAFFVASRYSINAAPLLSDWIVNESIRMLTAFSVMFFVVLLVTML
ASRLLSVLVRGVGLGLIDRMLGALFGIVRGLVIILFLITAAGFTPLPQQPFWQQAVLSEPLEIMAADVIPWLPQDFRNLI
GFAK

Sequences:

>Translated_164_residues
MTIFDYIVIGIISFSALLSVTRGLVHEIVSLLAWIIAFFVASRYSINAAPLLSDWIVNESIRMLTAFSVMFFVVLLVTML
ASRLLSVLVRGVGLGLIDRMLGALFGIVRGLVIILFLITAAGFTPLPQQPFWQQAVLSEPLEIMAADVIPWLPQDFRNLI
GFAK
>Mature_163_residues
TIFDYIVIGIISFSALLSVTRGLVHEIVSLLAWIIAFFVASRYSINAAPLLSDWIVNESIRMLTAFSVMFFVVLLVTMLA
SRLLSVLVRGVGLGLIDRMLGALFGIVRGLVIILFLITAAGFTPLPQQPFWQQAVLSEPLEIMAADVIPWLPQDFRNLIG
FAK

Specific function: Required for colicin V production from plasmid IncFI ColV3-K30 [H]

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788652, Length=139, Percent_Identity=37.410071942446, Blast_Score=78, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003825 [H]

Pfam domain/function: PF02674 Colicin_V [H]

EC number: NA

Molecular weight: Translated: 18125; Mature: 17994

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIFDYIVIGIISFSALLSVTRGLVHEIVSLLAWIIAFFVASRYSINAAPLLSDWIVNES
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IRMLTAFSVMFFVVLLVTMLASRLLSVLVRGVGLGLIDRMLGALFGIVRGLVIILFLITA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGFTPLPQQPFWQQAVLSEPLEIMAADVIPWLPQDFRNLIGFAK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC
>Mature Secondary Structure 
TIFDYIVIGIISFSALLSVTRGLVHEIVSLLAWIIAFFVASRYSINAAPLLSDWIVNES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IRMLTAFSVMFFVVLLVTMLASRLLSVLVRGVGLGLIDRMLGALFGIVRGLVIILFLITA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGFTPLPQQPFWQQAVLSEPLEIMAADVIPWLPQDFRNLIGFAK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3040734; 2991286; 9205837; 9278503; 2542219 [H]