| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is dfrA [H]
Identifier: 114331020
GI number: 114331020
Start: 1054108
End: 1054638
Strand: Reverse
Name: dfrA [H]
Synonym: Neut_1020
Alternate gene names: 114331020
Gene position: 1054638-1054108 (Counterclockwise)
Preceding gene: 114331021
Following gene: 114331018
Centisome position: 39.63
GC content: 48.4
Gene sequence:
>531_bases ATGACTATACTGCAACCTGCCACCTCCCGGCTTGCCATTCTAGCTGCCATATCAGCCAACCGAGTGATCGGATTGAATAA TTCATTACCTTGGCACTTACCAGCAGATCTGAAGCATTTTAAACAGCTAACCACCGGTCATATCGTTGTGATGGGGCGTC GTACATTTGATTCCATTGGCAAACCTCTGCCTGACCGCACCAATGTTGTGCTCTCTCGTCAGCATGTTCTTGATGTACCA GGAATTATCACGGCACACTCGATTCAGGAAGTGCTGGATCACTTTGCCAATGATGACAGGCAGATTTTTGTCATTGGAGG TGCTGAGCTATACCGACAAACACTACCACTGTGTCAGCGCCTGTACCTGACCGAGATTCAGGAGGATTTTGAAGGCGATA CTTTTTTCCCGGAGTACGATCACGATGACTGGCAGGAAATTTCTCGCGAAATCCACCATGAAACAGGAGGTAGTGGCCTG GAATACCACTTTGTGATGCTGGATCACAAGCTGCCAGATTCTGGTGGCTGA
Upstream 100 bases:
>100_bases AGCTGAATCCGGCAATCAGAAATATTCTTGATTTCAGGTACGAGGATTTCACCTTACATAATTATGATCCACATCCGCCC ATCAAGGCGCCTGTTGCCGT
Downstream 100 bases:
>100_bases ACAACATAACCTGGCCTACCTGCTGAAGAACTCTACTGCGCTTGCTCCTCACCCCCGGAAACGAGTGATTCAGCTTCTAT TCGAGCACGCCACTTTTTCA
Product: dihydrofolate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MTILQPATSRLAILAAISANRVIGLNNSLPWHLPADLKHFKQLTTGHIVVMGRRTFDSIGKPLPDRTNVVLSRQHVLDVP GIITAHSIQEVLDHFANDDRQIFVIGGAELYRQTLPLCQRLYLTEIQEDFEGDTFFPEYDHDDWQEISREIHHETGGSGL EYHFVMLDHKLPDSGG
Sequences:
>Translated_176_residues MTILQPATSRLAILAAISANRVIGLNNSLPWHLPADLKHFKQLTTGHIVVMGRRTFDSIGKPLPDRTNVVLSRQHVLDVP GIITAHSIQEVLDHFANDDRQIFVIGGAELYRQTLPLCQRLYLTEIQEDFEGDTFFPEYDHDDWQEISREIHHETGGSGL EYHFVMLDHKLPDSGG >Mature_175_residues TILQPATSRLAILAAISANRVIGLNNSLPWHLPADLKHFKQLTTGHIVVMGRRTFDSIGKPLPDRTNVVLSRQHVLDVPG IITAHSIQEVLDHFANDDRQIFVIGGAELYRQTLPLCQRLYLTEIQEDFEGDTFFPEYDHDDWQEISREIHHETGGSGLE YHFVMLDHKLPDSGG
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Homo sapiens, GI4503323, Length=157, Percent_Identity=33.1210191082803, Blast_Score=81, Evalue=5e-16, Organism=Homo sapiens, GI28827793, Length=154, Percent_Identity=33.1168831168831, Blast_Score=74, Evalue=6e-14, Organism=Escherichia coli, GI1786233, Length=160, Percent_Identity=41.875, Blast_Score=137, Evalue=5e-34, Organism=Caenorhabditis elegans, GI17505899, Length=183, Percent_Identity=28.4153005464481, Blast_Score=68, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6324810, Length=136, Percent_Identity=30.8823529411765, Blast_Score=74, Evalue=1e-14, Organism=Drosophila melanogaster, GI116008026, Length=183, Percent_Identity=31.1475409836066, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI24647458, Length=183, Percent_Identity=31.1475409836066, Blast_Score=92, Evalue=2e-19,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 19917; Mature: 19786
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00075 DHFR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILQPATSRLAILAAISANRVIGLNNSLPWHLPADLKHFKQLTTGHIVVMGRRTFDSIG CCCCCCCHHHEEHEEEECCCEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHC KPLPDRTNVVLSRQHVLDVPGIITAHSIQEVLDHFANDDRQIFVIGGAELYRQTLPLCQR CCCCCCCCEEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHH LYLTEIQEDFEGDTFFPEYDHDDWQEISREIHHETGGSGLEYHFVMLDHKLPDSGG HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCC >Mature Secondary Structure TILQPATSRLAILAAISANRVIGLNNSLPWHLPADLKHFKQLTTGHIVVMGRRTFDSIG CCCCCCHHHEEHEEEECCCEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHC KPLPDRTNVVLSRQHVLDVPGIITAHSIQEVLDHFANDDRQIFVIGGAELYRQTLPLCQR CCCCCCCCEEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHH LYLTEIQEDFEGDTFFPEYDHDDWQEISREIHHETGGSGLEYHFVMLDHKLPDSGG HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2840350; 9384377 [H]