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The map label for this gene is 114331018

Identifier: 114331018

GI number: 114331018

Start: 1047968

End: 1049668

Strand: Reverse

Name: 114331018

Synonym: Neut_1016

Alternate gene names: NA

Gene position: 1049668-1047968 (Counterclockwise)

Preceding gene: 114331020

Following gene: 114331017

Centisome position: 39.45

GC content: 49.85

Gene sequence:

>1701_bases
ATGATTTTGCAAGCGCTATGTAAATACTACGAACGCAAGCCGGACTTACCTCGCCCTGGTTTTGAAATCAAACCCATCCC
GTTCATCATCGAGATCAATGCTGATGGTAGATTCGTACAGATCGAAGACACGAGAACCATGGCAGGCAAGAAAAAAATTG
CCCACAGCTTTCTGGTACCCCAAGGGGTAAAGAAAACTTCCGGAATTGCAGCCAATCCATTGTGGGATACCACTGAATAT
GTGTTGGGCGTAACCAGTACAGGAAAACCGGAACGGGTACAGGAACAGCACGCAGCATTCCTGGCAAAACTGGAAGTATT
AGCCAACGAGATTAATGATGCCGGATTGAATGCTATTTGCACATTCCTGCACTCTCCTGAAAAAGAGCGATTGGAGAATA
ACCCGCTCTGGTCAGAAATTCGTGACACCAACTCCATTCTTACCTTCCGGCTAAGTGGTGATAAGGAGCTGGTTTGCCAG
CGCCCGGCAGTCTACACCCTGTTTGAAAATGCAAGTACAGAAACAGAAAAAATCATCTGTCTGATTACTGGCAAACCTGA
CCACTTCGAGCGCCTGCATACCGCCATCAAAGGTGTCTGGGGCGCCCAGACCAGCGGTGCGAATATAGTTTCCTTCAATA
AGGAGGCATTCAACTCTTTTGCCAAAGAACAGGGTGCCAATGCACCCGTTGGCAAACATGCTGCTTTTGCCTACACCACT
GCACTCAACCATTTATTAAGCAGAGAAAGTACCCAGCGCATTCAGGTGGGTGACGCTTCTACCGTGTTCTGGTCCGAGCA
ATCTTCTCCACTGGAGGATTCATTTGCCAGTATTTTTGATGAGCCGCCCAAGGATGATCCAGCAAGACAAACGCGCGCCA
TTGAAGCCTTATTCAAGTCACCAGAGACCGGCACATTTTCCAATGAGGGGGGTGATACTCCTTTTTATGTGCTGGGGCTG
GCTCCCAATGCAGCGCGCATCAGTGTGCGTTTCTGGCTGACAGGCACGGCTGCCGGAATGTCGCAGCGGATACGTCGGCA
TTTCGAGGATCTGAAGATTGTTCACGCCAGCTTCGAGAAACCTTATCTCTCGCTTTTCCGTCTGCTGGTTTCCACAGCCG
CACAAGGCAAATCGGAAAACATTCCGCCCAATCTGGCCGGTGATTTCATGCGAGCCATTCTGGAAGGGTTACCTTATCCG
CAAACTCTGCTGGCTGCCGCTGTGCGCCGCATTCGTGCAGAACGGGAAATCACCTGCCCTCGTGCCTCACTCATCAAAGC
CTGTTTGAACCGGCAGGCACATCGTTCATCCTCTCAAGAAAAGGAGATCACAGTGTCACTCGATAATTCCAATACCAATC
CCGGTTACCGTACCGGCCGTCTGTTTGCCGCGCTGGAAAAGATACAGGAAGAATCCAGCCCGGGGCTAAACGCCACGATT
CGGGATCGCTTCTATGGCGCAGCCTCCAGTACGCCGGTTACCGTATTTGCCAACCTGATGAAGCTGAAAAATCATCATCT
TGCCAAGCTGGAAGAAGGACGTAAACGCTTTTTTGAAAAACTTATCGGCGAAATTATGGCCAGTATCAGCGACTTCCCGG
CACATCTAAATCTGGCCGATCAAGGGCGTTTTGCTATCGGATATTACCATCAACGACAAGCCTTCTTCACTAAATCCGAA
CCTGCTAATAAAGGAGAATAA

Upstream 100 bases:

>100_bases
ACGACCTGGATTATTCCAACTCCGCCAGCCCCGATCCGCGCTTCTTCCGGGCTGAAATGAAAAATGGTGTGCTGGATTTG
AACAACGTGGAGGTGTGAGG

Downstream 100 bases:

>100_bases
TCACCATGACACTGAAAAACCGCTATGACTTTGTATTGCTATTCGATGTAAAAGACGGCAACCCGAATGGCGATCCAGAT
GCAGGCAATCTGCCGCGTGT

Product: CRISPR-associated RAMP Csd1 family protein

Products: NA

Alternate protein names: CRISPR-Associated Csd1 Family Protein; CRISPR-Associated RAMP Csd1 Family Protein; Csd1 Family CRISPR-Associated Protein; Crispr-Protein; CRISPR-Associated Protein; CRISPR-Associated Protein Csd2 Family; Crispr-Associated Protein Csd1 Family

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MILQALCKYYERKPDLPRPGFEIKPIPFIIEINADGRFVQIEDTRTMAGKKKIAHSFLVPQGVKKTSGIAANPLWDTTEY
VLGVTSTGKPERVQEQHAAFLAKLEVLANEINDAGLNAICTFLHSPEKERLENNPLWSEIRDTNSILTFRLSGDKELVCQ
RPAVYTLFENASTETEKIICLITGKPDHFERLHTAIKGVWGAQTSGANIVSFNKEAFNSFAKEQGANAPVGKHAAFAYTT
ALNHLLSRESTQRIQVGDASTVFWSEQSSPLEDSFASIFDEPPKDDPARQTRAIEALFKSPETGTFSNEGGDTPFYVLGL
APNAARISVRFWLTGTAAGMSQRIRRHFEDLKIVHASFEKPYLSLFRLLVSTAAQGKSENIPPNLAGDFMRAILEGLPYP
QTLLAAAVRRIRAEREITCPRASLIKACLNRQAHRSSSQEKEITVSLDNSNTNPGYRTGRLFAALEKIQEESSPGLNATI
RDRFYGAASSTPVTVFANLMKLKNHHLAKLEEGRKRFFEKLIGEIMASISDFPAHLNLADQGRFAIGYYHQRQAFFTKSE
PANKGE

Sequences:

>Translated_566_residues
MILQALCKYYERKPDLPRPGFEIKPIPFIIEINADGRFVQIEDTRTMAGKKKIAHSFLVPQGVKKTSGIAANPLWDTTEY
VLGVTSTGKPERVQEQHAAFLAKLEVLANEINDAGLNAICTFLHSPEKERLENNPLWSEIRDTNSILTFRLSGDKELVCQ
RPAVYTLFENASTETEKIICLITGKPDHFERLHTAIKGVWGAQTSGANIVSFNKEAFNSFAKEQGANAPVGKHAAFAYTT
ALNHLLSRESTQRIQVGDASTVFWSEQSSPLEDSFASIFDEPPKDDPARQTRAIEALFKSPETGTFSNEGGDTPFYVLGL
APNAARISVRFWLTGTAAGMSQRIRRHFEDLKIVHASFEKPYLSLFRLLVSTAAQGKSENIPPNLAGDFMRAILEGLPYP
QTLLAAAVRRIRAEREITCPRASLIKACLNRQAHRSSSQEKEITVSLDNSNTNPGYRTGRLFAALEKIQEESSPGLNATI
RDRFYGAASSTPVTVFANLMKLKNHHLAKLEEGRKRFFEKLIGEIMASISDFPAHLNLADQGRFAIGYYHQRQAFFTKSE
PANKGE
>Mature_566_residues
MILQALCKYYERKPDLPRPGFEIKPIPFIIEINADGRFVQIEDTRTMAGKKKIAHSFLVPQGVKKTSGIAANPLWDTTEY
VLGVTSTGKPERVQEQHAAFLAKLEVLANEINDAGLNAICTFLHSPEKERLENNPLWSEIRDTNSILTFRLSGDKELVCQ
RPAVYTLFENASTETEKIICLITGKPDHFERLHTAIKGVWGAQTSGANIVSFNKEAFNSFAKEQGANAPVGKHAAFAYTT
ALNHLLSRESTQRIQVGDASTVFWSEQSSPLEDSFASIFDEPPKDDPARQTRAIEALFKSPETGTFSNEGGDTPFYVLGL
APNAARISVRFWLTGTAAGMSQRIRRHFEDLKIVHASFEKPYLSLFRLLVSTAAQGKSENIPPNLAGDFMRAILEGLPYP
QTLLAAAVRRIRAEREITCPRASLIKACLNRQAHRSSSQEKEITVSLDNSNTNPGYRTGRLFAALEKIQEESSPGLNATI
RDRFYGAASSTPVTVFANLMKLKNHHLAKLEEGRKRFFEKLIGEIMASISDFPAHLNLADQGRFAIGYYHQRQAFFTKSE
PANKGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62948; Mature: 62948

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILQALCKYYERKPDLPRPGFEIKPIPFIIEINADGRFVQIEDTRTMAGKKKIAHSFLVP
CHHHHHHHHHHCCCCCCCCCCEECCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHCC
QGVKKTSGIAANPLWDTTEYVLGVTSTGKPERVQEQHAAFLAKLEVLANEINDAGLNAIC
CCCCCCCCCCCCCCCCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
TFLHSPEKERLENNPLWSEIRDTNSILTFRLSGDKELVCQRPAVYTLFENASTETEKIIC
HHHCCCCHHHHCCCCCHHHHCCCCCEEEEEECCCCCEEECCCCEEEEECCCCCCCCEEEE
LITGKPDHFERLHTAIKGVWGAQTSGANIVSFNKEAFNSFAKEQGANAPVGKHAAFAYTT
EEECCCHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHH
ALNHLLSRESTQRIQVGDASTVFWSEQSSPLEDSFASIFDEPPKDDPARQTRAIEALFKS
HHHHHHCCCCCCEEEECCCCEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
PETGTFSNEGGDTPFYVLGLAPNAARISVRFWLTGTAAGMSQRIRRHFEDLKIVHASFEK
CCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCC
PYLSLFRLLVSTAAQGKSENIPPNLAGDFMRAILEGLPYPQTLLAAAVRRIRAEREITCP
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC
RASLIKACLNRQAHRSSSQEKEITVSLDNSNTNPGYRTGRLFAALEKIQEESSPGLNATI
HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEH
RDRFYGAASSTPVTVFANLMKLKNHHLAKLEEGRKRFFEKLIGEIMASISDFPAHLNLAD
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
QGRFAIGYYHQRQAFFTKSEPANKGE
CCCEEEEEEEHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MILQALCKYYERKPDLPRPGFEIKPIPFIIEINADGRFVQIEDTRTMAGKKKIAHSFLVP
CHHHHHHHHHHCCCCCCCCCCEECCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHCC
QGVKKTSGIAANPLWDTTEYVLGVTSTGKPERVQEQHAAFLAKLEVLANEINDAGLNAIC
CCCCCCCCCCCCCCCCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
TFLHSPEKERLENNPLWSEIRDTNSILTFRLSGDKELVCQRPAVYTLFENASTETEKIIC
HHHCCCCHHHHCCCCCHHHHCCCCCEEEEEECCCCCEEECCCCEEEEECCCCCCCCEEEE
LITGKPDHFERLHTAIKGVWGAQTSGANIVSFNKEAFNSFAKEQGANAPVGKHAAFAYTT
EEECCCHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHH
ALNHLLSRESTQRIQVGDASTVFWSEQSSPLEDSFASIFDEPPKDDPARQTRAIEALFKS
HHHHHHCCCCCCEEEECCCCEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
PETGTFSNEGGDTPFYVLGLAPNAARISVRFWLTGTAAGMSQRIRRHFEDLKIVHASFEK
CCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCC
PYLSLFRLLVSTAAQGKSENIPPNLAGDFMRAILEGLPYPQTLLAAAVRRIRAEREITCP
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC
RASLIKACLNRQAHRSSSQEKEITVSLDNSNTNPGYRTGRLFAALEKIQEESSPGLNATI
HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEH
RDRFYGAASSTPVTVFANLMKLKNHHLAKLEEGRKRFFEKLIGEIMASISDFPAHLNLAD
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
QGRFAIGYYHQRQAFFTKSEPANKGE
CCCEEEEEEEHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA