| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is ybhG [C]
Identifier: 114331012
GI number: 114331012
Start: 1042639
End: 1043679
Strand: Reverse
Name: ybhG [C]
Synonym: Neut_1010
Alternate gene names: 114331012
Gene position: 1043679-1042639 (Counterclockwise)
Preceding gene: 114331013
Following gene: 114331011
Centisome position: 39.22
GC content: 52.93
Gene sequence:
>1041_bases ATGAGTAAAATCATTTTCGCTCGCGCCACAAAGCTGATCATCGTCATCGTGGTGGTTACTACTCTAGGTCTCGGTGGCAC ATTCCTGTGGATGCAGCATGTTGATCAAGATGAGAATCTGCTCTATCTGTATGGCAATGTCGATATTCGGGAAGTACAAC TGGCTTTCCGCCAACCTGGGCGAGTTGAGCAAGTTTTGTTTGATGAGGGAGACTTTGTTGCCGCCGGCACACGGGTGGCA ACACTGGATGCTCAACCGTATCAGGAAGCATTTGCGGCAGCAGAAGCCTCCGTGCAGGTGGCGCAGGCAGAGCTGGCCAA GATGCATAGCGGCTCACGCCCACAAGAAGTCGCCCAGGCACGAGAAGCGCTCAAACAGGCACAGGCACTTGCGTATCAGA CCGAGCGTAATTATGCACGTGCACGTAAACTGCTGCCTTCCAAAGCCAGCAGTCAGCAAGATGTAGACAATACCCGTGCT GCACGTGATCGGGCTGTCGCTGGAGTCAAAGCAGCCACAGCGGCCTTATCTCAGGCAGAAGAAGGGTTTCGAAAGGAAGA CATTGCCGCAGCCGAAGCCCGGCTGGCAGCTGCGATGGCCGCGCGGGATCAGGCTGCTACTGCACTGGCAGATACCGAAC TTTTTGCACCTAGTAATGGCACGGTGATTGCACGTATCCGAGAGCCTGGCAGCATGGTAACCAGTCAGAACACCATCTAC AATTTGAGTCTTGATTATCCAGTCTATGTGCGCGCCTATATTAATGAAACTGTATTAGGCCGTATTGCTCCCGGCACTCC CGTTCGGGTGCGGAGCGATTCCTCGGAAAAAACCTACCATGGCCAGATCGGTTTTATTTCACCCCGCGCTGAATTTACCC CCAAAACAGTGGAAACTATTGAACTACGTACCGATCTGGTTTATCGCTTACGGATTGTAGTGAACGATGCTGATCCAGCA CTACGTCAGGGGATGCCGGTTACGGTTACGGTAGCGGTAGATACGCATCCTGCGACTGATCTGCCAGTTGATGACTTCTG A
Upstream 100 bases:
>100_bases GGAGCGACAAAATGAAAACTCTCTGTGTTAGTACATCCAGTCTGCCAACGTCGAACCAGAGCACCATAAAACTCCGGCTT CAGCACATGAAAGGCGTGCA
Downstream 100 bases:
>100_bases TATGGATGCTGCAGCGGATCCATCTATTTCTACTATTGCCACACCTGACAATGCAGCCGTTGTTATTGATCAACTCAATA AATCTTTTGGTAATGTACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MSKIIFARATKLIIVIVVVTTLGLGGTFLWMQHVDQDENLLYLYGNVDIREVQLAFRQPGRVEQVLFDEGDFVAAGTRVA TLDAQPYQEAFAAAEASVQVAQAELAKMHSGSRPQEVAQAREALKQAQALAYQTERNYARARKLLPSKASSQQDVDNTRA ARDRAVAGVKAATAALSQAEEGFRKEDIAAAEARLAAAMAARDQAATALADTELFAPSNGTVIARIREPGSMVTSQNTIY NLSLDYPVYVRAYINETVLGRIAPGTPVRVRSDSSEKTYHGQIGFISPRAEFTPKTVETIELRTDLVYRLRIVVNDADPA LRQGMPVTVTVAVDTHPATDLPVDDF
Sequences:
>Translated_346_residues MSKIIFARATKLIIVIVVVTTLGLGGTFLWMQHVDQDENLLYLYGNVDIREVQLAFRQPGRVEQVLFDEGDFVAAGTRVA TLDAQPYQEAFAAAEASVQVAQAELAKMHSGSRPQEVAQAREALKQAQALAYQTERNYARARKLLPSKASSQQDVDNTRA ARDRAVAGVKAATAALSQAEEGFRKEDIAAAEARLAAAMAARDQAATALADTELFAPSNGTVIARIREPGSMVTSQNTIY NLSLDYPVYVRAYINETVLGRIAPGTPVRVRSDSSEKTYHGQIGFISPRAEFTPKTVETIELRTDLVYRLRIVVNDADPA LRQGMPVTVTVAVDTHPATDLPVDDF >Mature_345_residues SKIIFARATKLIIVIVVVTTLGLGGTFLWMQHVDQDENLLYLYGNVDIREVQLAFRQPGRVEQVLFDEGDFVAAGTRVAT LDAQPYQEAFAAAEASVQVAQAELAKMHSGSRPQEVAQAREALKQAQALAYQTERNYARARKLLPSKASSQQDVDNTRAA RDRAVAGVKAATAALSQAEEGFRKEDIAAAEARLAAAMAARDQAATALADTELFAPSNGTVIARIREPGSMVTSQNTIYN LSLDYPVYVRAYINETVLGRIAPGTPVRVRSDSSEKTYHGQIGFISPRAEFTPKTVETIELRTDLVYRLRIVVNDADPAL RQGMPVTVTVAVDTHPATDLPVDDF
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0194 family [H]
Homologues:
Organism=Escherichia coli, GI1787013, Length=303, Percent_Identity=50.1650165016502, Blast_Score=251, Evalue=7e-68, Organism=Escherichia coli, GI1789900, Length=272, Percent_Identity=29.7794117647059, Blast_Score=89, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 - InterPro: IPR022936 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 37693; Mature: 37562
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIIFARATKLIIVIVVVTTLGLGGTFLWMQHVDQDENLLYLYGNVDIREVQLAFRQPG CCCEEHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCEEEEEECCCCEEHHHHHCCCC RVEQVLFDEGDFVAAGTRVATLDAQPYQEAFAAAEASVQVAQAELAKMHSGSRPQEVAQA CCHHHEECCCCEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH REALKQAQALAYQTERNYARARKLLPSKASSQQDVDNTRAARDRAVAGVKAATAALSQAE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EGFRKEDIAAAEARLAAAMAARDQAATALADTELFAPSNGTVIARIREPGSMVTSQNTIY HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEEEECCCCEEECCCEEE NLSLDYPVYVRAYINETVLGRIAPGTPVRVRSDSSEKTYHGQIGFISPRAEFTPKTVETI EEEECCCEEEEEECCHHHEEEECCCCCEEEECCCCCCEECCEEEEECCCCCCCCCHHEEE ELRTDLVYRLRIVVNDADPALRQGMPVTVTVAVDTHPATDLPVDDF HHHHCEEEEEEEEEECCCHHHHCCCCEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure SKIIFARATKLIIVIVVVTTLGLGGTFLWMQHVDQDENLLYLYGNVDIREVQLAFRQPG CCEEHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCEEEEEECCCCEEHHHHHCCCC RVEQVLFDEGDFVAAGTRVATLDAQPYQEAFAAAEASVQVAQAELAKMHSGSRPQEVAQA CCHHHEECCCCEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH REALKQAQALAYQTERNYARARKLLPSKASSQQDVDNTRAARDRAVAGVKAATAALSQAE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EGFRKEDIAAAEARLAAAMAARDQAATALADTELFAPSNGTVIARIREPGSMVTSQNTIY HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEEEECCCCEEECCCEEE NLSLDYPVYVRAYINETVLGRIAPGTPVRVRSDSSEKTYHGQIGFISPRAEFTPKTVETI EEEECCCEEEEEECCHHHEEEECCCCCEEEECCCCCCEECCEEEEECCCCCCCCCHHEEE ELRTDLVYRLRIVVNDADPALRQGMPVTVTVAVDTHPATDLPVDDF HHHHCEEEEEEEEEECCCHHHHCCCCEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA