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The map label for this gene is 114330991

Identifier: 114330991

GI number: 114330991

Start: 1020719

End: 1022203

Strand: Reverse

Name: 114330991

Synonym: Neut_0989

Alternate gene names: NA

Gene position: 1022203-1020719 (Counterclockwise)

Preceding gene: 114330992

Following gene: 114330988

Centisome position: 38.41

GC content: 49.9

Gene sequence:

>1485_bases
ATGACCATCCCTTCCTATCCCCTGCTGTATCAGCTCAACGCCCGCATCAGACAGTACGAGCTTTCACGCGCTGCTATCTC
ACCTCCCCCACTGAATGATTGGCCTGATAGTGAATGGGATCGGTTAGCTGAACTGGGGTTTGACTGGGTATGGCTGCTTG
GCGTATGGGAAACCGGAAAAGCTGGCCAGCGTGTTTCACGTACACAGCCTGGTTGGCAGAAAAGCTTTAAGGCCACCTGC
TTACCGGATCTATCCGAGACAGATATTTGCGGTTCCTGCTTTGCCATTACCCGTTATCAGGTGGCCGACAGACTGGGAGG
AAACAAGGCGCTGCAGCACCTGCGCCACAAACTCAATGAACGCGGATTGCGCCTCATGCTCGATTTCGTTCCTAATCACA
CCGCACTGGATCATCCCTGGATGCAGACACACCCCGAGTTCTATATCAACGGGACACGGGAGGATTTACAGCGCAATCCA
CAAAACTATGTTGCACTTGTATCGAATTCATCTGGCAAAGATCAGCGAATTTTTGCCTATGGCCGTGACCCTTACTTTGA
TGGCTGGCCAGATACCCTACAACTGGATTACAGCAATCCTGCCGTACAACAGGCGATGCAAGTAGAACTGCTAAACATTG
CCAAGCTGTGCGACGGCGTACGTTGTGATATGGCCATGCTGTTGTTACCGCAAATTTTTGAACGTACTTGGCAGCGCTCT
ATTACCTCCTTCTGGCCTGCCACCATTCAGGCAGTCCGCAAACAATTTCCGGGTTTCCTTTTTCTGGCTGAAGTGTACTG
GGATCTGGAATGGATGCTGCAGCAGCAAGGATTTGATTACACTTACGACAAACGATTATATGATCGGCTACTTAGCCAAG
TTCCCAAACCTGTGCACGACCATCTCACAGCAGATATCACTTATCAGCGCAAACTCGCCCGGTTCTTGGAGAATCACGAT
GAGCAGCGCGCGGCAACTGTTTTTCCACCGACTGTGCATGAAGCAGCAGCCATGATCAATTATCTGGCACCAGGGATGCG
TTTTTTTCAGGCTGGACAACTGGAAGGCAAGCGGGTACATATCCCGATTCACTTATGCAGAAGTCCGGTTGAGCCGACAG
ACTCCAGACTCAGTCACTTTTATCAACAGCTACTGCAGATTCTGAAAAATCCGGTGTTACGACAGGGAAACTGGGTATTG
CTGGAATGCTTGCCGGCCCAGAAAGAGAATGGGACTTGGAATAATTTCATCGCATACCGCTGGCAGGGAGAAAACAGTGA
CTCTCTGCTAATCATCGTCAACTACGCACCCCATCCGGGCCAATGTCTAGTGGAGTTTGCTGATTTACAACCAAAAGAAA
GTACCGGGAGCTGGCATGATCTGATGAATCCGAGTGAATCGTTACCAGTTCGGATAGAAAATATTACTCAGCTTTTTGTT
GACCTGCCTGCCTGGGGTTACCGCATTCTGGAAAAGCAACCTTAA

Upstream 100 bases:

>100_bases
ATAATGAATGCTTGGTAATTTATCGTTGCAGCCGAAGGGCAAACTATTGATCGGTATGCTACTGGCTCTCCCGAAAATTG
ATGAAAATTAGAAATATTCT

Downstream 100 bases:

>100_bases
CCTCAACTCATTCAGTGGAGGCACGCCGGGAGAGATGCAATTTATCCACTGTCTGCATCACCAGGGAATAAACGGCCGGC
ACCACCACTAATGTAAGCAG

Product: alpha amylase, catalytic region

Products: NA

Alternate protein names: Alpha Amylase; Alpha-Amylase Family Protein; Alpha Amylase Domain-Containing Protein; Alpha Amylase Catalytic Subunit; Alpha-Amylase; Alpha Amylase Catalytic Domain-Containing Protein; Alpha Amylase Family Protein; Glycosidase; Alpha Amylase Domain Protein; Glycoside Hydrolase

Number of amino acids: Translated: 494; Mature: 493

Protein sequence:

>494_residues
MTIPSYPLLYQLNARIRQYELSRAAISPPPLNDWPDSEWDRLAELGFDWVWLLGVWETGKAGQRVSRTQPGWQKSFKATC
LPDLSETDICGSCFAITRYQVADRLGGNKALQHLRHKLNERGLRLMLDFVPNHTALDHPWMQTHPEFYINGTREDLQRNP
QNYVALVSNSSGKDQRIFAYGRDPYFDGWPDTLQLDYSNPAVQQAMQVELLNIAKLCDGVRCDMAMLLLPQIFERTWQRS
ITSFWPATIQAVRKQFPGFLFLAEVYWDLEWMLQQQGFDYTYDKRLYDRLLSQVPKPVHDHLTADITYQRKLARFLENHD
EQRAATVFPPTVHEAAAMINYLAPGMRFFQAGQLEGKRVHIPIHLCRSPVEPTDSRLSHFYQQLLQILKNPVLRQGNWVL
LECLPAQKENGTWNNFIAYRWQGENSDSLLIIVNYAPHPGQCLVEFADLQPKESTGSWHDLMNPSESLPVRIENITQLFV
DLPAWGYRILEKQP

Sequences:

>Translated_494_residues
MTIPSYPLLYQLNARIRQYELSRAAISPPPLNDWPDSEWDRLAELGFDWVWLLGVWETGKAGQRVSRTQPGWQKSFKATC
LPDLSETDICGSCFAITRYQVADRLGGNKALQHLRHKLNERGLRLMLDFVPNHTALDHPWMQTHPEFYINGTREDLQRNP
QNYVALVSNSSGKDQRIFAYGRDPYFDGWPDTLQLDYSNPAVQQAMQVELLNIAKLCDGVRCDMAMLLLPQIFERTWQRS
ITSFWPATIQAVRKQFPGFLFLAEVYWDLEWMLQQQGFDYTYDKRLYDRLLSQVPKPVHDHLTADITYQRKLARFLENHD
EQRAATVFPPTVHEAAAMINYLAPGMRFFQAGQLEGKRVHIPIHLCRSPVEPTDSRLSHFYQQLLQILKNPVLRQGNWVL
LECLPAQKENGTWNNFIAYRWQGENSDSLLIIVNYAPHPGQCLVEFADLQPKESTGSWHDLMNPSESLPVRIENITQLFV
DLPAWGYRILEKQP
>Mature_493_residues
TIPSYPLLYQLNARIRQYELSRAAISPPPLNDWPDSEWDRLAELGFDWVWLLGVWETGKAGQRVSRTQPGWQKSFKATCL
PDLSETDICGSCFAITRYQVADRLGGNKALQHLRHKLNERGLRLMLDFVPNHTALDHPWMQTHPEFYINGTREDLQRNPQ
NYVALVSNSSGKDQRIFAYGRDPYFDGWPDTLQLDYSNPAVQQAMQVELLNIAKLCDGVRCDMAMLLLPQIFERTWQRSI
TSFWPATIQAVRKQFPGFLFLAEVYWDLEWMLQQQGFDYTYDKRLYDRLLSQVPKPVHDHLTADITYQRKLARFLENHDE
QRAATVFPPTVHEAAAMINYLAPGMRFFQAGQLEGKRVHIPIHLCRSPVEPTDSRLSHFYQQLLQILKNPVLRQGNWVLL
ECLPAQKENGTWNNFIAYRWQGENSDSLLIIVNYAPHPGQCLVEFADLQPKESTGSWHDLMNPSESLPVRIENITQLFVD
LPAWGYRILEKQP

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57328; Mature: 57197

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPSYPLLYQLNARIRQYELSRAAISPPPLNDWPDSEWDRLAELGFDWVWLLGVWETGK
CCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCC
AGQRVSRTQPGWQKSFKATCLPDLSETDICGSCFAITRYQVADRLGGNKALQHLRHKLNE
CCCHHHCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RGLRLMLDFVPNHTALDHPWMQTHPEFYINGTREDLQRNPQNYVALVSNSSGKDQRIFAY
CCCEEEEECCCCCCCCCCCHHHCCCCEEECCCHHHHHCCCCCEEEEEECCCCCCCEEEEE
GRDPYFDGWPDTLQLDYSNPAVQQAMQVELLNIAKLCDGVRCDMAMLLLPQIFERTWQRS
CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ITSFWPATIQAVRKQFPGFLFLAEVYWDLEWMLQQQGFDYTYDKRLYDRLLSQVPKPVHD
HHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHH
HLTADITYQRKLARFLENHDEQRAATVFPPTVHEAAAMINYLAPGMRFFQAGQLEGKRVH
HHCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCHHHHHHCCCCCCCEEE
IPIHLCRSPVEPTDSRLSHFYQQLLQILKNPVLRQGNWVLLECLPAQKENGTWNNFIAYR
EEHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCCEEEEEEECCCCCCCCCCCEEEEE
WQGENSDSLLIIVNYAPHPGQCLVEFADLQPKESTGSWHDLMNPSESLPVRIENITQLFV
EECCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHCCCCCCCCEEHHHHHHHHH
DLPAWGYRILEKQP
HCCCHHHHHCCCCC
>Mature Secondary Structure 
TIPSYPLLYQLNARIRQYELSRAAISPPPLNDWPDSEWDRLAELGFDWVWLLGVWETGK
CCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCC
AGQRVSRTQPGWQKSFKATCLPDLSETDICGSCFAITRYQVADRLGGNKALQHLRHKLNE
CCCHHHCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RGLRLMLDFVPNHTALDHPWMQTHPEFYINGTREDLQRNPQNYVALVSNSSGKDQRIFAY
CCCEEEEECCCCCCCCCCCHHHCCCCEEECCCHHHHHCCCCCEEEEEECCCCCCCEEEEE
GRDPYFDGWPDTLQLDYSNPAVQQAMQVELLNIAKLCDGVRCDMAMLLLPQIFERTWQRS
CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ITSFWPATIQAVRKQFPGFLFLAEVYWDLEWMLQQQGFDYTYDKRLYDRLLSQVPKPVHD
HHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHH
HLTADITYQRKLARFLENHDEQRAATVFPPTVHEAAAMINYLAPGMRFFQAGQLEGKRVH
HHCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCHHHHHHCCCCCCCEEE
IPIHLCRSPVEPTDSRLSHFYQQLLQILKNPVLRQGNWVLLECLPAQKENGTWNNFIAYR
EEHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCCEEEEEEECCCCCCCCCCCEEEEE
WQGENSDSLLIIVNYAPHPGQCLVEFADLQPKESTGSWHDLMNPSESLPVRIENITQLFV
EECCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHCCCCCCCCEEHHHHHHHHH
DLPAWGYRILEKQP
HCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA