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The map label for this gene is lpsE [H]

Identifier: 114330903

GI number: 114330903

Start: 921069

End: 922241

Strand: Direct

Name: lpsE [H]

Synonym: Neut_0900

Alternate gene names: 114330903

Gene position: 921069-922241 (Clockwise)

Preceding gene: 114330902

Following gene: 114330904

Centisome position: 34.61

GC content: 48.25

Gene sequence:

>1173_bases
GTGCAGCCCAGGAAGATATTTCGCCCCCCATTGATTGCCCATGTAATTTTTCATTTTGGAGTGGGCGGACTGGAAAATGG
TTTAGTGAATCTGATCAACCATATTCCTGAGAACCGTTACCGCCATGCCATTATTTGCCTCAAAGGATTTTCAGAATTTC
ACAAGCGGCTTAATCGGAATGATGTCGAGATCATTGCGCTGAACAAGCGCGAGGGTAATGATTTTAGTATCTATGGAGAA
CTTTACCGGATATTTAGGCGACTCAATCCGGATATTGTACATACGCGCAATCTTGCAGCGATGGAGGCTCAGGTGGTGGC
AGCCGTAGCAGGTGTGAAGGCGCGAATACACGGAGAACATGGGCGCGATATCTTTGATCTTGATGGCAAGAATCGGAAAT
ACAATCTGTTACGCAAGATAATCCGCCCGTTTGTTCATTATTTTATTGCTGTCAGCAAGGATTTGGAGCGTTGGCTAATT
GATACGGTAAATGTGTCGCCAGCACGAGTACACCAGATTTATAACGGCGTGGAACATTTACGTTTCCATCCCGATAGCAC
CACCCTACCAATTGAAGCGTTTCCTTCCGGTTTTTTTGATGGAGGACCGTTTGTTGTGGGTAGTGTTGGCAGGATGGTGG
AAGTTAAGGATTTCCCGTCTCTAGTGAAGGCTTTCTTATTATTGCGTGAAAAAATACCTGTAACAGGCAGGCCGTTGCGC
CTTGTGATCATAGGAGATGGCATTGCGAAACCACAATGTGAAGCCATACTGCGCTCAGCCGGAGTTGAACAGCTTGCCTG
GCTTCCGGGCGAGCGTTCGGATATCCCTCAATTGATGCAGGCGATGGATCTGTTTGTGCTCCCTTCGCTGGCAGAAGGTG
TTTCCAATACCATATTGGAAGCCATGGCAAGCGGCTTGCCAGTCGTAGCGACCCGGGTAGGTGGTAATGCCGAACTGGTT
TTGGAGGGAGAAACTGGTTGCCTGGTCTCCTCAGGGGATCCTGCCGCTCTGGCTCAAGTAATTGATAAATATTATCAGGA
TGATGCGATGGCGCACAGGCACGGGCGACGTGCACGTGAGATTATTGAGCAGCAATTCAGTATGCATGCCATGACGAATG
GCTATCTTGCAGTGTATGACCAGGTATTGGGTCATAATGCTGCTCACGATTAA

Upstream 100 bases:

>100_bases
AAGAGGCAGCATCAGTGTTGCGAGAGTTTATCGGTGATATGAAGCCAGTGATTAATGAGAGGCTCCTGGCTGTGCACAGC
ACGTACCGCGACTAAGCGAA

Downstream 100 bases:

>100_bases
AGATTGGAAAGATCAAAAAGATCAACTGACTGGATAGGAATATGTGCGGCATAACGGGGGTATTTGATACGCGCGGCGGG
AGTGGGATTGATCGTAATCT

Product: glycosyl transferase, group 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MQPRKIFRPPLIAHVIFHFGVGGLENGLVNLINHIPENRYRHAIICLKGFSEFHKRLNRNDVEIIALNKREGNDFSIYGE
LYRIFRRLNPDIVHTRNLAAMEAQVVAAVAGVKARIHGEHGRDIFDLDGKNRKYNLLRKIIRPFVHYFIAVSKDLERWLI
DTVNVSPARVHQIYNGVEHLRFHPDSTTLPIEAFPSGFFDGGPFVVGSVGRMVEVKDFPSLVKAFLLLREKIPVTGRPLR
LVIIGDGIAKPQCEAILRSAGVEQLAWLPGERSDIPQLMQAMDLFVLPSLAEGVSNTILEAMASGLPVVATRVGGNAELV
LEGETGCLVSSGDPAALAQVIDKYYQDDAMAHRHGRRAREIIEQQFSMHAMTNGYLAVYDQVLGHNAAHD

Sequences:

>Translated_390_residues
MQPRKIFRPPLIAHVIFHFGVGGLENGLVNLINHIPENRYRHAIICLKGFSEFHKRLNRNDVEIIALNKREGNDFSIYGE
LYRIFRRLNPDIVHTRNLAAMEAQVVAAVAGVKARIHGEHGRDIFDLDGKNRKYNLLRKIIRPFVHYFIAVSKDLERWLI
DTVNVSPARVHQIYNGVEHLRFHPDSTTLPIEAFPSGFFDGGPFVVGSVGRMVEVKDFPSLVKAFLLLREKIPVTGRPLR
LVIIGDGIAKPQCEAILRSAGVEQLAWLPGERSDIPQLMQAMDLFVLPSLAEGVSNTILEAMASGLPVVATRVGGNAELV
LEGETGCLVSSGDPAALAQVIDKYYQDDAMAHRHGRRAREIIEQQFSMHAMTNGYLAVYDQVLGHNAAHD
>Mature_390_residues
MQPRKIFRPPLIAHVIFHFGVGGLENGLVNLINHIPENRYRHAIICLKGFSEFHKRLNRNDVEIIALNKREGNDFSIYGE
LYRIFRRLNPDIVHTRNLAAMEAQVVAAVAGVKARIHGEHGRDIFDLDGKNRKYNLLRKIIRPFVHYFIAVSKDLERWLI
DTVNVSPARVHQIYNGVEHLRFHPDSTTLPIEAFPSGFFDGGPFVVGSVGRMVEVKDFPSLVKAFLLLREKIPVTGRPLR
LVIIGDGIAKPQCEAILRSAGVEQLAWLPGERSDIPQLMQAMDLFVLPSLAEGVSNTILEAMASGLPVVATRVGGNAELV
LEGETGCLVSSGDPAALAQVIDKYYQDDAMAHRHGRRAREIIEQQFSMHAMTNGYLAVYDQVLGHNAAHD

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1788357, Length=217, Percent_Identity=29.4930875576037, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 43537; Mature: 43537

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPRKIFRPPLIAHVIFHFGVGGLENGLVNLINHIPENRYRHAIICLKGFSEFHKRLNRN
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCC
DVEIIALNKREGNDFSIYGELYRIFRRLNPDIVHTRNLAAMEAQVVAAVAGVKARIHGEH
CEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHEEECCC
GRDIFDLDGKNRKYNLLRKIIRPFVHYFIAVSKDLERWLIDTVNVSPARVHQIYNGVEHL
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHE
RFHPDSTTLPIEAFPSGFFDGGPFVVGSVGRMVEVKDFPSLVKAFLLLREKIPVTGRPLR
EECCCCCCCCHHHCCCCCCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCEE
LVIIGDGIAKPQCEAILRSAGVEQLAWLPGERSDIPQLMQAMDLFVLPSLAEGVSNTILE
EEEEECCCCCHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AMASGLPVVATRVGGNAELVLEGETGCLVSSGDPAALAQVIDKYYQDDAMAHRHGRRARE
HHHCCCCEEEEEECCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIEQQFSMHAMTNGYLAVYDQVLGHNAAHD
HHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQPRKIFRPPLIAHVIFHFGVGGLENGLVNLINHIPENRYRHAIICLKGFSEFHKRLNRN
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCC
DVEIIALNKREGNDFSIYGELYRIFRRLNPDIVHTRNLAAMEAQVVAAVAGVKARIHGEH
CEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHEEECCC
GRDIFDLDGKNRKYNLLRKIIRPFVHYFIAVSKDLERWLIDTVNVSPARVHQIYNGVEHL
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHE
RFHPDSTTLPIEAFPSGFFDGGPFVVGSVGRMVEVKDFPSLVKAFLLLREKIPVTGRPLR
EECCCCCCCCHHHCCCCCCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCEE
LVIIGDGIAKPQCEAILRSAGVEQLAWLPGERSDIPQLMQAMDLFVLPSLAEGVSNTILE
EEEEECCCCCHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AMASGLPVVATRVGGNAELVLEGETGCLVSSGDPAALAQVIDKYYQDDAMAHRHGRRARE
HHHCCCCEEEEEECCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIEQQFSMHAMTNGYLAVYDQVLGHNAAHD
HHHHHHHHHHHCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]