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The map label for this gene is ydiA [C]

Identifier: 114330875

GI number: 114330875

Start: 888744

End: 889571

Strand: Direct

Name: ydiA [C]

Synonym: Neut_0869

Alternate gene names: 114330875

Gene position: 888744-889571 (Clockwise)

Preceding gene: 114330874

Following gene: 114330878

Centisome position: 33.4

GC content: 46.14

Gene sequence:

>828_bases
ATGTTACAACGCAGCGTTTTTTTTCTGTCTGATCGTACGGGCATTACAGCGGAAACACTGGGTCATAGTCTGTTGACCCA
GTTCGATGGAATAGAGTGGAAGAAGCACTATGCTTCTTTCCTGGACAGTGCAGCTAAGGTTCAGGAGATCATTGATCGTA
TCAATACAATTGCGAAGCAGGAAGGTCAGCCATCATTGGTGTTTAGCACATTGCTGGATCCGGTTATCCTCGCTTCTGTC
CGTCAGGCTGATTGTTATCTTATTGATTTTTTTGAATCTTGTCTTGGTGTGCTGGAAACGGCGCTGCAACAGTCACCTGT
GCGCATACCCGGACGCTCCCATATTCTTGGCCAGGATGCTTCCTATTTTCGACGTATTGCTGCGATTCAGTATGCGCTGA
ACAGTGATGATGGTAGTAACTCTAAAATTCTTGCCGATGCTGACGTGATTTTGGTAGGAGTATCACGCTCTGGTAAAACC
CCAGTGTGTGTGTATCTGGCTTTGCAGTATGGAGTGCTTGCTGCTAATTATCCATTTACGCCAGAAGATATGGGAGTCGT
GCGTCTTCCTTCGTTGTTACAACCACTGCGTGAGAAATTGTTTGGATTGACGTTGAGCACGTCACGGCTTCAGGCTGTTC
GTGTGGAACGGTATCCGGGCAGTCATTATGCTTCATTCGTTGAATGCCAACGTGAACTTCAGTGGCAAAATGAACTGTAC
CAGCAGTTTAATATCCCGTTTATCGATACTACCGGAGTATCAATAGAAGAGATCAGTGCATCAATTATCAACCGGATGCG
GCTGGAAAGACGTTTGTATGGAACCTGA

Upstream 100 bases:

>100_bases
GCACGCTGGCTGGTTGAACAGGGTATCAGCAGCCTTTCTCTTAATCAGGACACGGTAGTGAGCACCTGGCTGCATCTGGC
GGACCGGGAGCAGTAGGGCG

Downstream 100 bases:

>100_bases
ATCAGTACCTATGCTGGATATGATAGGTAACAGTATGATTTTTATATCCTGATGGATTTCCAGTATCTGGATTTCCAGTA
TGTATTATCCAGGCTGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MLQRSVFFLSDRTGITAETLGHSLLTQFDGIEWKKHYASFLDSAAKVQEIIDRINTIAKQEGQPSLVFSTLLDPVILASV
RQADCYLIDFFESCLGVLETALQQSPVRIPGRSHILGQDASYFRRIAAIQYALNSDDGSNSKILADADVILVGVSRSGKT
PVCVYLALQYGVLAANYPFTPEDMGVVRLPSLLQPLREKLFGLTLSTSRLQAVRVERYPGSHYASFVECQRELQWQNELY
QQFNIPFIDTTGVSIEEISASIINRMRLERRLYGT

Sequences:

>Translated_275_residues
MLQRSVFFLSDRTGITAETLGHSLLTQFDGIEWKKHYASFLDSAAKVQEIIDRINTIAKQEGQPSLVFSTLLDPVILASV
RQADCYLIDFFESCLGVLETALQQSPVRIPGRSHILGQDASYFRRIAAIQYALNSDDGSNSKILADADVILVGVSRSGKT
PVCVYLALQYGVLAANYPFTPEDMGVVRLPSLLQPLREKLFGLTLSTSRLQAVRVERYPGSHYASFVECQRELQWQNELY
QQFNIPFIDTTGVSIEEISASIINRMRLERRLYGT
>Mature_275_residues
MLQRSVFFLSDRTGITAETLGHSLLTQFDGIEWKKHYASFLDSAAKVQEIIDRINTIAKQEGQPSLVFSTLLDPVILASV
RQADCYLIDFFESCLGVLETALQQSPVRIPGRSHILGQDASYFRRIAAIQYALNSDDGSNSKILADADVILVGVSRSGKT
PVCVYLALQYGVLAANYPFTPEDMGVVRLPSLLQPLREKLFGLTLSTSRLQAVRVERYPGSHYASFVECQRELQWQNELY
QQFNIPFIDTTGVSIEEISASIINRMRLERRLYGT

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family

Homologues:

Organism=Escherichia coli, GI1787995, Length=274, Percent_Identity=40.5109489051095, Blast_Score=206, Evalue=1e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y869_NITEC (Q0AHQ0)

Other databases:

- EMBL:   CP000450
- RefSeq:   YP_747097.1
- STRING:   Q0AHQ0
- GeneID:   4272869
- GenomeReviews:   CP000450_GR
- KEGG:   net:Neut_0869
- NMPDR:   fig|335283.3.peg.1634
- eggNOG:   COG1806
- HOGENOM:   HBG304855
- OMA:   DAINYAM
- PhylomeDB:   Q0AHQ0
- ProtClustDB:   PRK05339
- BioCyc:   NEUT335283:NEUT_0869-MONOMER
- HAMAP:   MF_01062
- InterPro:   IPR005177

Pfam domain/function: PF03618 DUF299

EC number: NA

Molecular weight: Translated: 30848; Mature: 30848

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQRSVFFLSDRTGITAETLGHSLLTQFDGIEWKKHYASFLDSAAKVQEIIDRINTIAKQ
CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EGQPSLVFSTLLDPVILASVRQADCYLIDFFESCLGVLETALQQSPVRIPGRSHILGQDA
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
SYFRRIAAIQYALNSDDGSNSKILADADVILVGVSRSGKTPVCVYLALQYGVLAANYPFT
HHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEECCCCCCCEEEHHHHHHHHHCCCCCCC
PEDMGVVRLPSLLQPLREKLFGLTLSTSRLQAVRVERYPGSHYASFVECQRELQWQNELY
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
QQFNIPFIDTTGVSIEEISASIINRMRLERRLYGT
HHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLQRSVFFLSDRTGITAETLGHSLLTQFDGIEWKKHYASFLDSAAKVQEIIDRINTIAKQ
CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EGQPSLVFSTLLDPVILASVRQADCYLIDFFESCLGVLETALQQSPVRIPGRSHILGQDA
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
SYFRRIAAIQYALNSDDGSNSKILADADVILVGVSRSGKTPVCVYLALQYGVLAANYPFT
HHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEECCCCCCCEEEHHHHHHHHHCCCCCCC
PEDMGVVRLPSLLQPLREKLFGLTLSTSRLQAVRVERYPGSHYASFVECQRELQWQNELY
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
QQFNIPFIDTTGVSIEEISASIINRMRLERRLYGT
HHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA