| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is hemH [H]
Identifier: 114330783
GI number: 114330783
Start: 786407
End: 787504
Strand: Direct
Name: hemH [H]
Synonym: Neut_0770
Alternate gene names: 114330783
Gene position: 786407-787504 (Clockwise)
Preceding gene: 114330782
Following gene: 114330784
Centisome position: 29.55
GC content: 48.63
Gene sequence:
>1098_bases ATGTCACGAATAATATTACCGGAGCCGGCTTATCAACACGGTTCAATTGATAGAGTCGGTGTTCTGCTGATTAATCTGGG TACGCCAGATGCTCCGAATGCCAAGTCCCTGCGAACCTATCTAAGACAATTTCTGAGTGAGCCTCGTATTGTGGAGTTCC CGCGCTGGTTGTGGTGGCTTATTCTGAACGGTATTATTTTGAATATCCGGCCAGGTAAATCAGCAAAGAAGTATGCGCAA ATCTGGACGCCAGAAGGTTCTCCACTGAAAATACATACCGAGCGTCAGACAGAACTTGTCGCAGCTTTACTGAAGAAACA GCTCAATTCGGTTCCGATAGTTGAATATGCAATGATTGTCGGCAATCCATCTATCGCAGAGAGGTTACAGCGGATGAGAG AGCAGGGTTGCAGCCGGATTTTGGTGCTGTCATTATTTCCCCAGTATGCTGCCAGTAGCGCCGGTTGTGCATTGGATAGT GTTTTTACTGAGTTGGGAAAGATGCGTAATATCCCTGATATTCGCACCGTCAAGCACTACCACGATGATCCGGGCTATAT TGCAGCATTGGCGCAGAATGTTCGTGATTACTGGGAGAAACACGGGAGGCCTGACAAGCTGGTTATCAGCTTTCACGGTG TGCCGCGTAAAACTCTGGAGATGGGCGATCCTTATCATTGTGAATGTCAAAAAACCGGGCGATTACTGGCTGAGGCACTG GAACTAACGAATGACCAGTATCAAGTATGCTTCCAGTCGCGTTTTGGCTTTTCTCAGTGGTTGAGTCCCTATACTTCAGA AGTTCTAAAAGAATTAGGCAAACAGGAAACCGGGCGGGTGGATGTTGTCTGCCCAGGATTCGTCTCGGACTGTCTGGAAA CACTCGAGGAAATCGCAATGGAAGGTAAAACAACCTTTACCGAGGCCGGAGGGGGGGAATTTCACTACATTCCCAGCCTC AATGAACATCCGGAGTGGATTAAAGCGATGAGAGACATGATTCAAACACACTTAGCAGGCTGGGTTGTCCGGCAACCTTC CGAAGAGGATGCTGAGCAGTCGCGTAAACGGGCGCTGGAGCTGGGAGCAGAAGAATGA
Upstream 100 bases:
>100_bases GGTCCACGACGTATGGCTTATGAGCGCATTATCCCTATTGTTGATATAACTGCCCGCCTGCTTTCAAATAATCTGTCGTA ATATCCCGCCCTCTATTTTT
Downstream 100 bases:
>100_bases TTAGTGCATCCATTTGTATTCTTGTTGATTGATAATCCGCGCAGGGGATTTGCTCTGAATTGGGGCTGAACATATGATCG ATTTATATCTGGTTATGGTC
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MSRIILPEPAYQHGSIDRVGVLLINLGTPDAPNAKSLRTYLRQFLSEPRIVEFPRWLWWLILNGIILNIRPGKSAKKYAQ IWTPEGSPLKIHTERQTELVAALLKKQLNSVPIVEYAMIVGNPSIAERLQRMREQGCSRILVLSLFPQYAASSAGCALDS VFTELGKMRNIPDIRTVKHYHDDPGYIAALAQNVRDYWEKHGRPDKLVISFHGVPRKTLEMGDPYHCECQKTGRLLAEAL ELTNDQYQVCFQSRFGFSQWLSPYTSEVLKELGKQETGRVDVVCPGFVSDCLETLEEIAMEGKTTFTEAGGGEFHYIPSL NEHPEWIKAMRDMIQTHLAGWVVRQPSEEDAEQSRKRALELGAEE
Sequences:
>Translated_365_residues MSRIILPEPAYQHGSIDRVGVLLINLGTPDAPNAKSLRTYLRQFLSEPRIVEFPRWLWWLILNGIILNIRPGKSAKKYAQ IWTPEGSPLKIHTERQTELVAALLKKQLNSVPIVEYAMIVGNPSIAERLQRMREQGCSRILVLSLFPQYAASSAGCALDS VFTELGKMRNIPDIRTVKHYHDDPGYIAALAQNVRDYWEKHGRPDKLVISFHGVPRKTLEMGDPYHCECQKTGRLLAEAL ELTNDQYQVCFQSRFGFSQWLSPYTSEVLKELGKQETGRVDVVCPGFVSDCLETLEEIAMEGKTTFTEAGGGEFHYIPSL NEHPEWIKAMRDMIQTHLAGWVVRQPSEEDAEQSRKRALELGAEE >Mature_364_residues SRIILPEPAYQHGSIDRVGVLLINLGTPDAPNAKSLRTYLRQFLSEPRIVEFPRWLWWLILNGIILNIRPGKSAKKYAQI WTPEGSPLKIHTERQTELVAALLKKQLNSVPIVEYAMIVGNPSIAERLQRMREQGCSRILVLSLFPQYAASSAGCALDSV FTELGKMRNIPDIRTVKHYHDDPGYIAALAQNVRDYWEKHGRPDKLVISFHGVPRKTLEMGDPYHCECQKTGRLLAEALE LTNDQYQVCFQSRFGFSQWLSPYTSEVLKELGKQETGRVDVVCPGFVSDCLETLEEIAMEGKTTFTEAGGGEFHYIPSLN EHPEWIKAMRDMIQTHLAGWVVRQPSEEDAEQSRKRALELGAEE
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499025, Length=262, Percent_Identity=27.8625954198473, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI60499021, Length=262, Percent_Identity=27.8625954198473, Blast_Score=99, Evalue=4e-21, Organism=Escherichia coli, GI1786681, Length=320, Percent_Identity=41.5625, Blast_Score=268, Evalue=6e-73, Organism=Saccharomyces cerevisiae, GI6324750, Length=330, Percent_Identity=24.5454545454545, Blast_Score=96, Evalue=9e-21, Organism=Drosophila melanogaster, GI17864156, Length=338, Percent_Identity=26.9230769230769, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI24651774, Length=269, Percent_Identity=26.3940520446097, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI45552018, Length=186, Percent_Identity=29.5698924731183, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 41433; Mature: 41302
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIILPEPAYQHGSIDRVGVLLINLGTPDAPNAKSLRTYLRQFLSEPRIVEFPRWLWWL CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHH ILNGIILNIRPGKSAKKYAQIWTPEGSPLKIHTERQTELVAALLKKQLNSVPIVEYAMIV HHCCEEEEECCCCCHHHHHHEECCCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHH GNPSIAERLQRMREQGCSRILVLSLFPQYAASSAGCALDSVFTELGKMRNIPDIRTVKHY CCHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHC HDDPGYIAALAQNVRDYWEKHGRPDKLVISFHGVPRKTLEMGDPYHCECQKTGRLLAEAL CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHCCCCCEECHHHHHHHHHHHH ELTNDQYQVCFQSRFGFSQWLSPYTSEVLKELGKQETGRVDVVCPGFVSDCLETLEEIAM HHCCHHHHHHHHHHCCHHHHHCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHH EGKTTFTEAGGGEFHYIPSLNEHPEWIKAMRDMIQTHLAGWVVRQPSEEDAEQSRKRALE CCCCEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LGAEE CCCCC >Mature Secondary Structure SRIILPEPAYQHGSIDRVGVLLINLGTPDAPNAKSLRTYLRQFLSEPRIVEFPRWLWWL CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHH ILNGIILNIRPGKSAKKYAQIWTPEGSPLKIHTERQTELVAALLKKQLNSVPIVEYAMIV HHCCEEEEECCCCCHHHHHHEECCCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHH GNPSIAERLQRMREQGCSRILVLSLFPQYAASSAGCALDSVFTELGKMRNIPDIRTVKHY CCHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHC HDDPGYIAALAQNVRDYWEKHGRPDKLVISFHGVPRKTLEMGDPYHCECQKTGRLLAEAL CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHCCCCCEECHHHHHHHHHHHH ELTNDQYQVCFQSRFGFSQWLSPYTSEVLKELGKQETGRVDVVCPGFVSDCLETLEEIAM HHCCHHHHHHHHHHCCHHHHHCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHH EGKTTFTEAGGGEFHYIPSLNEHPEWIKAMRDMIQTHLAGWVVRQPSEEDAEQSRKRALE CCCCEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LGAEE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12700255 [H]