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The map label for this gene is yfgC [C]

Identifier: 114330784

GI number: 114330784

Start: 787616

End: 788407

Strand: Direct

Name: yfgC [C]

Synonym: Neut_0771

Alternate gene names: 114330784

Gene position: 787616-788407 (Clockwise)

Preceding gene: 114330783

Following gene: 114330785

Centisome position: 29.6

GC content: 47.47

Gene sequence:

>792_bases
ATGAGTACATTAATGATGAAGTTATTGTTCGCCTTCCTGTGGATCAACTTTCTGACAGCCTGTGCAACTTCTCCTACCGG
CCGAACGCAGCTTGTATTTATGCCGGATACAGAGGTAAACAGCATGGGTCTACAGGCATTTGATACTTTGAAGCGTGAAA
AGCAGATCAGTCATGATGCGGTGAGTAATCGGTTTGTCAGTTGTGTTGCCAGCGCAATTACCCGGGAAGTGGGGGGTGAA
TGGGAAGTGGTCGTATTTAAAGACCAGTCACTGAATGCATTTGCGTTGCCTGGTGGGAAAATTGGTGTGCATACTGGCTT
ACTCAATCTGGTGGATAACCAGGATCAGCTGGCAGTTATCATTGGTCATGAAGTCGGGCATGTGATGGCTCGCCATAGTA
ATGAACGTTTATCTCAACAGGTTGGAACAAACCTGGGAATATCGCTTGTCCAGGCAGTTGCTGCACCTCAATCTACGTTG
GGGCAAACTGCAATCGGTTTGCTGGGGATTGGGGCACAGTATGGGATTATTATGCCGTATAGCAGATTACAGGAATCCGA
GGCGGATATGATTGGTCTGGACTTGATGGCCAAGGCAGGATTCAACCCGTCGGAAAGTGTAAAACTGTGGCAAAAGATGG
AGCAGGCCAGCCAGGATGCACCGATAGAATTCCTTTCCACCCACCCTTCGCACGCGTCCCGTATCCAGAATCTGCAGGCA
TATTTACCAAAAGCGCAACAATTACAGAAACAAGCGAATATTGCAGGGAAAAATCCACATTGTACTAAATGA

Upstream 100 bases:

>100_bases
ATTTGTATTCTTGTTGATTGATAATCCGCGCAGGGGATTTGCTCTGAATTGGGGCTGAACATATGATCGATTTATATCTG
GTTATGGTCGGGAGAGAAGA

Downstream 100 bases:

>100_bases
AGAATATCGAATTCATTGGTAACTGCAGGCTGATGAGCAGCATCATTCGCTATGCGGTGACTGAATAGCTGTCTACTAAT
TGCTGGAAATTATTTTTTAT

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MSTLMMKLLFAFLWINFLTACATSPTGRTQLVFMPDTEVNSMGLQAFDTLKREKQISHDAVSNRFVSCVASAITREVGGE
WEVVVFKDQSLNAFALPGGKIGVHTGLLNLVDNQDQLAVIIGHEVGHVMARHSNERLSQQVGTNLGISLVQAVAAPQSTL
GQTAIGLLGIGAQYGIIMPYSRLQESEADMIGLDLMAKAGFNPSESVKLWQKMEQASQDAPIEFLSTHPSHASRIQNLQA
YLPKAQQLQKQANIAGKNPHCTK

Sequences:

>Translated_263_residues
MSTLMMKLLFAFLWINFLTACATSPTGRTQLVFMPDTEVNSMGLQAFDTLKREKQISHDAVSNRFVSCVASAITREVGGE
WEVVVFKDQSLNAFALPGGKIGVHTGLLNLVDNQDQLAVIIGHEVGHVMARHSNERLSQQVGTNLGISLVQAVAAPQSTL
GQTAIGLLGIGAQYGIIMPYSRLQESEADMIGLDLMAKAGFNPSESVKLWQKMEQASQDAPIEFLSTHPSHASRIQNLQA
YLPKAQQLQKQANIAGKNPHCTK
>Mature_262_residues
STLMMKLLFAFLWINFLTACATSPTGRTQLVFMPDTEVNSMGLQAFDTLKREKQISHDAVSNRFVSCVASAITREVGGEW
EVVVFKDQSLNAFALPGGKIGVHTGLLNLVDNQDQLAVIIGHEVGHVMARHSNERLSQQVGTNLGISLVQAVAAPQSTLG
QTAIGLLGIGAQYGIIMPYSRLQESEADMIGLDLMAKAGFNPSESVKLWQKMEQASQDAPIEFLSTHPSHASRIQNLQAY
LPKAQQLQKQANIAGKNPHCTK

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=263, Percent_Identity=30.4182509505703, Blast_Score=104, Evalue=8e-23,
Organism=Escherichia coli, GI1788840, Length=182, Percent_Identity=32.4175824175824, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI87082185, Length=244, Percent_Identity=24.5901639344262, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI87081800, Length=155, Percent_Identity=27.0967741935484, Blast_Score=65, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6322940, Length=188, Percent_Identity=36.1702127659575, Blast_Score=121, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 28585; Mature: 28454

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLMMKLLFAFLWINFLTACATSPTGRTQLVFMPDTEVNSMGLQAFDTLKREKQISHDA
CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
VSNRFVSCVASAITREVGGEWEVVVFKDQSLNAFALPGGKIGVHTGLLNLVDNQDQLAVI
HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCHHHHHHHHHHCCCCCEEEE
IGHEVGHVMARHSNERLSQQVGTNLGISLVQAVAAPQSTLGQTAIGLLGIGAQYGIIMPY
ECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEECCH
SRLQESEADMIGLDLMAKAGFNPSESVKLWQKMEQASQDAPIEFLSTHPSHASRIQNLQA
HHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHH
YLPKAQQLQKQANIAGKNPHCTK
HCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
STLMMKLLFAFLWINFLTACATSPTGRTQLVFMPDTEVNSMGLQAFDTLKREKQISHDA
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
VSNRFVSCVASAITREVGGEWEVVVFKDQSLNAFALPGGKIGVHTGLLNLVDNQDQLAVI
HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCHHHHHHHHHHCCCCCEEEE
IGHEVGHVMARHSNERLSQQVGTNLGISLVQAVAAPQSTLGQTAIGLLGIGAQYGIIMPY
ECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEECCH
SRLQESEADMIGLDLMAKAGFNPSESVKLWQKMEQASQDAPIEFLSTHPSHASRIQNLQA
HHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHH
YLPKAQQLQKQANIAGKNPHCTK
HCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]