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The map label for this gene is recN [H]

Identifier: 114330780

GI number: 114330780

Start: 782593

End: 784254

Strand: Reverse

Name: recN [H]

Synonym: Neut_0767

Alternate gene names: 114330780

Gene position: 784254-782593 (Counterclockwise)

Preceding gene: 114330781

Following gene: 114330774

Centisome position: 29.47

GC content: 48.62

Gene sequence:

>1662_bases
ATGTTGCAAAACCTATCTATTCAGAATTTCGTTATAGTTGATTACATTGATCTGCTCTTCAAACCCGGTTTTACCGTTCT
GACAGGTGAAACAGGTGCAGGAAAATCCATTCTAATCGACGCACTGGAACTTGTATTAGGCAGACGCGCCGACACAAGTC
AAATCAGGCATGGCTGTAAACGTGCCGAAATTACCGCACAATTTGATGTAAGCGCCATTCCTGCGCTACAGACATGGTTA
CAGGAGAATGCACTGGAAGACGAAACCGGCATTTGTCTGCTGCGCAGAATCATGGAAACCAGCGGACGTTCGCGTAATTT
CATCAATGGACACGCTGCCACCCTGCAACAATTGCGAACAGCAGGTGAATGGCTGGTTGATATCCATGGTCAACATGCAC
ACCAGTTGCTGATGCAGGGCCACAAACAGCGCGAACTGCTCGACACCTGGGCCGGTGAATCAGATCTTGCCCGGCGAGTC
GCCTCCTCCTATCGGCACTGGCAAGATCTATGTCAGCAAAGACTCTCGTGGAAACAGCAAAGCGAGCAAAATATACGAGA
GCACGAACTTCTGTCATGGCAACTGCAGGAACTGACTGCTCTGCACTTTTCATCTGAAGAATGGGAAACCCTGCAAGCAG
AACACAACCGGCTGACGCATACAGCCAGCCTGCTGGAAACTGCTCAGTCCAGTCTGGAAGCATTATCGGAAAGTGAAGCA
GCGGTATTGCCACAACTTAGCGCAGTGATCACCCACCTACGCAGCTTGTCGAATATTGACAAAACACTCGAACCAATTTG
CAGCCAGTTACAATCATCACAAATACAACTTCAGGAAGCAGTATATGAACTGAAATACTATCAGCAACATCTGGACATTG
ATCCCCGCAAGCTGCAGGAAATCGAGACACGTATTGCTGCTATCCATGGAACGGCCAGGAAATATCGCGTCTCTCCGGAA
ATGCTACCGGAGCTATTGGAAACAACCAGACAGCGTCTGGAGGTAGTGGGAAACATTTCAAACAACGAAATGTTGGCAGA
AGCAGAGAAATCTGCTCGCAATGATTATAAAAATCTTGCAGACAGATTAAGTCAGGCAAGGCAGAGTGCGGCAAATCAGC
TGTCCGAGCAAGTCACAGAATCCATGCAGGCGCTGGCAATGGACGGTGGTCGCTTCAATGTGGCATTGATACCAGTGCCA
TCGGGCAATCTGCATGGCCTGGAGCAGATCGAATTTCAGGTATCCGCCCACAAAGATCTGCCATTGCGGCCACTGAATAA
AGTAGCCTCTGGCGGTGAGTTATCGCGTATCAGCCTGGCGATTCAGGTTATTACAAGCAAGATTGGCACCACTCCCACTC
TTATTTTTGACGAAATAGACACCGGCATAGGTGGACGCATCGCTGAAATAATCGGTAAATTGCTGCATCAACTGGGAGAA
ACGCGGCAGGTAATCAGTATTACTCATCTTCCGCAGGTAGCGGCCAAAGGCGATCATCATTGGCGTGTATCTAAAACTGC
CGGAATAGATGATAACCAACTGCCAGCTAGCCATATTGCAGAACTTGATGCAGCAGAAAGAGTTGAGGAAATTGCTCGTA
TGCTGGGTGGTGAAAATCTGACCGCTACCACACTTCAGCACGCAACAGAAATACTGGGTTAG

Upstream 100 bases:

>100_bases
AAAACTTCTGCATCCCGTCCATCACAGTTACTACCGTATGCTGCGGGAAAAACTCGGTTGGAGCAGCATCCTTCAGAAAA
ATAGCCGTTAGTATCCATCC

Downstream 100 bases:

>100_bases
ACAGATCAAATCAACCGCAATAGAATTTTATTCCACTTTTTCTTTCTGCTCCTCGGCTGATGCGACGTAGGTAATCAGCT
TCTCCGGTTGCGAGTTCTCA

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MLQNLSIQNFVIVDYIDLLFKPGFTVLTGETGAGKSILIDALELVLGRRADTSQIRHGCKRAEITAQFDVSAIPALQTWL
QENALEDETGICLLRRIMETSGRSRNFINGHAATLQQLRTAGEWLVDIHGQHAHQLLMQGHKQRELLDTWAGESDLARRV
ASSYRHWQDLCQQRLSWKQQSEQNIREHELLSWQLQELTALHFSSEEWETLQAEHNRLTHTASLLETAQSSLEALSESEA
AVLPQLSAVITHLRSLSNIDKTLEPICSQLQSSQIQLQEAVYELKYYQQHLDIDPRKLQEIETRIAAIHGTARKYRVSPE
MLPELLETTRQRLEVVGNISNNEMLAEAEKSARNDYKNLADRLSQARQSAANQLSEQVTESMQALAMDGGRFNVALIPVP
SGNLHGLEQIEFQVSAHKDLPLRPLNKVASGGELSRISLAIQVITSKIGTTPTLIFDEIDTGIGGRIAEIIGKLLHQLGE
TRQVISITHLPQVAAKGDHHWRVSKTAGIDDNQLPASHIAELDAAERVEEIARMLGGENLTATTLQHATEILG

Sequences:

>Translated_553_residues
MLQNLSIQNFVIVDYIDLLFKPGFTVLTGETGAGKSILIDALELVLGRRADTSQIRHGCKRAEITAQFDVSAIPALQTWL
QENALEDETGICLLRRIMETSGRSRNFINGHAATLQQLRTAGEWLVDIHGQHAHQLLMQGHKQRELLDTWAGESDLARRV
ASSYRHWQDLCQQRLSWKQQSEQNIREHELLSWQLQELTALHFSSEEWETLQAEHNRLTHTASLLETAQSSLEALSESEA
AVLPQLSAVITHLRSLSNIDKTLEPICSQLQSSQIQLQEAVYELKYYQQHLDIDPRKLQEIETRIAAIHGTARKYRVSPE
MLPELLETTRQRLEVVGNISNNEMLAEAEKSARNDYKNLADRLSQARQSAANQLSEQVTESMQALAMDGGRFNVALIPVP
SGNLHGLEQIEFQVSAHKDLPLRPLNKVASGGELSRISLAIQVITSKIGTTPTLIFDEIDTGIGGRIAEIIGKLLHQLGE
TRQVISITHLPQVAAKGDHHWRVSKTAGIDDNQLPASHIAELDAAERVEEIARMLGGENLTATTLQHATEILG
>Mature_553_residues
MLQNLSIQNFVIVDYIDLLFKPGFTVLTGETGAGKSILIDALELVLGRRADTSQIRHGCKRAEITAQFDVSAIPALQTWL
QENALEDETGICLLRRIMETSGRSRNFINGHAATLQQLRTAGEWLVDIHGQHAHQLLMQGHKQRELLDTWAGESDLARRV
ASSYRHWQDLCQQRLSWKQQSEQNIREHELLSWQLQELTALHFSSEEWETLQAEHNRLTHTASLLETAQSSLEALSESEA
AVLPQLSAVITHLRSLSNIDKTLEPICSQLQSSQIQLQEAVYELKYYQQHLDIDPRKLQEIETRIAAIHGTARKYRVSPE
MLPELLETTRQRLEVVGNISNNEMLAEAEKSARNDYKNLADRLSQARQSAANQLSEQVTESMQALAMDGGRFNVALIPVP
SGNLHGLEQIEFQVSAHKDLPLRPLNKVASGGELSRISLAIQVITSKIGTTPTLIFDEIDTGIGGRIAEIIGKLLHQLGE
TRQVISITHLPQVAAKGDHHWRVSKTAGIDDNQLPASHIAELDAAERVEEIARMLGGENLTATTLQHATEILG

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=559, Percent_Identity=42.2182468694097, Blast_Score=409, Evalue=1e-115,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61709; Mature: 61709

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQNLSIQNFVIVDYIDLLFKPGFTVLTGETGAGKSILIDALELVLGRRADTSQIRHGCK
CCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCHH
RAEITAQFDVSAIPALQTWLQENALEDETGICLLRRIMETSGRSRNFINGHAATLQQLRT
HCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
AGEWLVDIHGQHAHQLLMQGHKQRELLDTWAGESDLARRVASSYRHWQDLCQQRLSWKQQ
HCCCEEECCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEQNIREHELLSWQLQELTALHFSSEEWETLQAEHNRLTHTASLLETAQSSLEALSESEA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AVLPQLSAVITHLRSLSNIDKTLEPICSQLQSSQIQLQEAVYELKYYQQHLDIDPRKLQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
IETRIAAIHGTARKYRVSPEMLPELLETTRQRLEVVGNISNNEMLAEAEKSARNDYKNLA
HHHHHHHHHCCHHHEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
DRLSQARQSAANQLSEQVTESMQALAMDGGRFNVALIPVPSGNLHGLEQIEFQVSAHKDL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHEEEECCCCC
PLRPLNKVASGGELSRISLAIQVITSKIGTTPTLIFDEIDTGIGGRIAEIIGKLLHQLGE
CCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHCC
TRQVISITHLPQVAAKGDHHWRVSKTAGIDDNQLPASHIAELDAAERVEEIARMLGGENL
CHHHHHHHHCHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
TATTLQHATEILG
HHHHHHHHHHHCC
>Mature Secondary Structure
MLQNLSIQNFVIVDYIDLLFKPGFTVLTGETGAGKSILIDALELVLGRRADTSQIRHGCK
CCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCHH
RAEITAQFDVSAIPALQTWLQENALEDETGICLLRRIMETSGRSRNFINGHAATLQQLRT
HCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
AGEWLVDIHGQHAHQLLMQGHKQRELLDTWAGESDLARRVASSYRHWQDLCQQRLSWKQQ
HCCCEEECCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEQNIREHELLSWQLQELTALHFSSEEWETLQAEHNRLTHTASLLETAQSSLEALSESEA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AVLPQLSAVITHLRSLSNIDKTLEPICSQLQSSQIQLQEAVYELKYYQQHLDIDPRKLQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
IETRIAAIHGTARKYRVSPEMLPELLETTRQRLEVVGNISNNEMLAEAEKSARNDYKNLA
HHHHHHHHHCCHHHEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
DRLSQARQSAANQLSEQVTESMQALAMDGGRFNVALIPVPSGNLHGLEQIEFQVSAHKDL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHEEEECCCCC
PLRPLNKVASGGELSRISLAIQVITSKIGTTPTLIFDEIDTGIGGRIAEIIGKLLHQLGE
CCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHCC
TRQVISITHLPQVAAKGDHHWRVSKTAGIDDNQLPASHIAELDAAERVEEIARMLGGENL
CHHHHHHHHCHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
TATTLQHATEILG
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3037486; 9205837; 9278503 [H]