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The map label for this gene is yiaN [C]

Identifier: 114330701

GI number: 114330701

Start: 691070

End: 692353

Strand: Reverse

Name: yiaN [C]

Synonym: Neut_0686

Alternate gene names: 114330701

Gene position: 692353-691070 (Counterclockwise)

Preceding gene: 114330702

Following gene: 114330700

Centisome position: 26.02

GC content: 49.38

Gene sequence:

>1284_bases
ATGATTGCGCTGTCCATGTTCCTGGTTTGCCTGATCATGCTGGCTTTCGGCTTTCCGGTTGCTTTTACTTTTGGTGGCGT
AGCACTTTTCTATGGCCTGTATTTCGAGGGATTGCATCTGTTCCTGATGGTCGCCGAGCGCATGCATTCAATCATGACCA
GTGTCACCCTGATGGCGGTACCACTGTTCATTTTCATGGGGCTGATCCTGGAAAAATCCGGCATTGCGGAAAGTATGCTG
GAATCGATGGGTTCCCTGTTTGGTCGTATCCGGGGTGGTCTGGCGGTATCAACTGTCATCGTAGGGATGCTGCTGGCAGC
GGCCACCGGCGTGGTAGGCGCTTCAGTCATTACCATGGGATTGATCGCCCTGCCTATCATGCTGAAATACGGTTATGACA
AGCGGCTGGCTACCGGGGTAATTTGCGCATCGGGCACGTTGGGGCAAATTATTCCCCCTTCGATTGTGCTGATTATCATG
GGCGACGTACTACAAAGGCCGGTCGGCAGTTTTTTCCGAGCGGCACTGGTACCTGGCCTGCTGCTGGTCGTCATTTATAT
CATTTATTGCCTGATACTTGCCTGGTTCAGAAAAGAAGCAGCCCCTCCTATACCCAACAAAAGTGGCTCCCTCATCAAGC
AATATTGGCACGCCTTCAAAACAATCATCCCGGCTTTGTCCCTGGTCATAATTGTACTGGGAACAGTTATCATTGGTATT
GCCACGCCGACTGAGTCAGCTGCGATGGGATCGGTCGGTGCAATCATTCTGGCCATGCTGAACGGAAAGTTCAAAATCAG
CATGCTGCACCAGGTTGCCATGGAAACCACTAAGATCACAACCATGGTATTTACCATCCTGGCAGGTGCTACATTCTTTT
CAATGGTGTTTACCTATACCGGTGGTGATGAAGCGGCCGAACTACTGTTGCCCCATTTACCAGGCGGTAAATGGGGATTC
ATTCTGCTGATGATGTTAATCATCTTCTTGCTGGGATTTTTTCTCGATTTTGTTGAAATCGCCTATATTTTTATTCCCAT
GATCACCCCTCTACTGATCAAGCTGGGAATTGATCCACTCTGGTTTGGTATTTTGGTCGCGCTCAATCTACAAACTTCTT
TCCTCACTCCGCCAGTTGGATTTTCATTATTCTACCTGCGGGGTGTTGCACCGCCATCCATCACCACTCTTGATATTTAC
CGGGGTGTTATCCCGTTCATCCTGCTGCAGATATTGACATTGGCACTGGTAGCGCTTTACCCGGGGTTGATCAAACTTGT
CTGA

Upstream 100 bases:

>100_bases
CAGCAGAAAGAATCATGATCTTGTCAAGCCTTGTCCGGATAGTTTTTCTGACCGCCATTCTGTCACTCTCAGACAGAATA
TTCACCAGAGCCATTGCCAA

Downstream 100 bases:

>100_bases
TCTCTCCGAATAACCACCAGACAAGTGCATGCACCGGGGTGTAGATCTGTCATCCCGGAACTTCTTCCTATCTTGATCGA
GATCTTCATGACAAACACGC

Product: TRAP dicarboxylate transporter, DctM subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MIALSMFLVCLIMLAFGFPVAFTFGGVALFYGLYFEGLHLFLMVAERMHSIMTSVTLMAVPLFIFMGLILEKSGIAESML
ESMGSLFGRIRGGLAVSTVIVGMLLAAATGVVGASVITMGLIALPIMLKYGYDKRLATGVICASGTLGQIIPPSIVLIIM
GDVLQRPVGSFFRAALVPGLLLVVIYIIYCLILAWFRKEAAPPIPNKSGSLIKQYWHAFKTIIPALSLVIIVLGTVIIGI
ATPTESAAMGSVGAIILAMLNGKFKISMLHQVAMETTKITTMVFTILAGATFFSMVFTYTGGDEAAELLLPHLPGGKWGF
ILLMMLIIFLLGFFLDFVEIAYIFIPMITPLLIKLGIDPLWFGILVALNLQTSFLTPPVGFSLFYLRGVAPPSITTLDIY
RGVIPFILLQILTLALVALYPGLIKLV

Sequences:

>Translated_427_residues
MIALSMFLVCLIMLAFGFPVAFTFGGVALFYGLYFEGLHLFLMVAERMHSIMTSVTLMAVPLFIFMGLILEKSGIAESML
ESMGSLFGRIRGGLAVSTVIVGMLLAAATGVVGASVITMGLIALPIMLKYGYDKRLATGVICASGTLGQIIPPSIVLIIM
GDVLQRPVGSFFRAALVPGLLLVVIYIIYCLILAWFRKEAAPPIPNKSGSLIKQYWHAFKTIIPALSLVIIVLGTVIIGI
ATPTESAAMGSVGAIILAMLNGKFKISMLHQVAMETTKITTMVFTILAGATFFSMVFTYTGGDEAAELLLPHLPGGKWGF
ILLMMLIIFLLGFFLDFVEIAYIFIPMITPLLIKLGIDPLWFGILVALNLQTSFLTPPVGFSLFYLRGVAPPSITTLDIY
RGVIPFILLQILTLALVALYPGLIKLV
>Mature_427_residues
MIALSMFLVCLIMLAFGFPVAFTFGGVALFYGLYFEGLHLFLMVAERMHSIMTSVTLMAVPLFIFMGLILEKSGIAESML
ESMGSLFGRIRGGLAVSTVIVGMLLAAATGVVGASVITMGLIALPIMLKYGYDKRLATGVICASGTLGQIIPPSIVLIIM
GDVLQRPVGSFFRAALVPGLLLVVIYIIYCLILAWFRKEAAPPIPNKSGSLIKQYWHAFKTIIPALSLVIIVLGTVIIGI
ATPTESAAMGSVGAIILAMLNGKFKISMLHQVAMETTKITTMVFTILAGATFFSMVFTYTGGDEAAELLLPHLPGGKWGF
ILLMMLIIFLLGFFLDFVEIAYIFIPMITPLLIKLGIDPLWFGILVALNLQTSFLTPPVGFSLFYLRGVAPPSITTLDIY
RGVIPFILLQILTLALVALYPGLIKLV

Specific function: Unknown

COG id: COG4664

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=409, Percent_Identity=27.8728606356968, Blast_Score=122, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 46075; Mature: 46075

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCC
>Mature Secondary Structure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HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]