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The map label for this gene is 114330702

Identifier: 114330702

GI number: 114330702

Start: 692436

End: 692990

Strand: Reverse

Name: 114330702

Synonym: Neut_0687

Alternate gene names: NA

Gene position: 692990-692436 (Counterclockwise)

Preceding gene: 114330703

Following gene: 114330701

Centisome position: 26.04

GC content: 50.27

Gene sequence:

>555_bases
GTGGAAATCTTATGCAAACTGGAACGCCTGATTAACAGGATTTCCGGCGCAACAGGCTGGCTGGCAGGCTGGCTGTGCGT
GCTAATGATCGGCGTGGTGTTCACTGATGTCATCACACGCTACTTTTTTCACGGCGGCTCAATCGCCATGCAGGAACTGG
AATGGCACCTGTTCGCAGCAATATTCCTGCTGGGTGCCGCTTACGTTGTGCGAGAAGACGCCAATGTACGGGTAGATATC
ATTTACGCCCATCTGAAACCACGCCGCAAAGCAATCATCGATATCTGCGGTTATCTTATTTTTGTCATCCCCATGTGTAC
GCTAATTCTCTACAGCTCCTGGGATTTCGTCAGTTATTCCTATCAGTTACAGGAAACATCCAGCGATCCTGGCGGGCTGC
CCTACCGCTTTGCATTCAAGGCATTACTACCAATTGGCTATGGTCTGGTACTGATTCAGTCACTGGCAGAAATCTTGCGT
AATCTGCGGCTGCTGGCGGAAAAACATAACCCACCTCTGACTGATTACGCCGCCCCACAGCAGAAAGAATCATGA

Upstream 100 bases:

>100_bases
AACGCATGATCATCGCAGGACATTAAGCTATCAGCACATAAAATATCGCCAGAACCACTGGAAAATCAACGACTGTCCCA
TCCCCTTGAAAGGATTCAAA

Downstream 100 bases:

>100_bases
TCTTGTCAAGCCTTGTCCGGATAGTTTTTCTGACCGCCATTCTGTCACTCTCAGACAGAATATTCACCAGAGCCATTGCC
AAATGATTGCGCTGTCCATG

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein; Mannitol Transporter; C4-Dicarboxylate Transporter Family Protein DctQ Subunit; Tripartite Transporter Small Subunit; TRAP-T Family Tripartite Transporter; TRAP Transporter Small Transmembrane Protein; Transporter DctQ Related Transmembrane Protein; TRAP-Type Transport System Small Permease Component; C4-Dicarboxylate Transporter Permease; TRAP Dicarboxylate Transporter DctQ Subunit; TRAP-Type Transporter Small Permease Component; Trap Dicarboxylate Transporter Dctm Subunit; Tripartite ATP-Independent Periplasmic Transporter; TRAP Mannitol/C4-Dicarboxylate Transporter; TRAP-Type Large Permease Component; Permease Component Of C4 Dicarboxylate Transporter; Permease; Transporter DctQ-Related Transmembrane Protein; TRAP Transporter DctQ-Like Membrane Protein Family; Triosephosphate Isomerase (TIM; TRAP Transporter DctQ Family Protein; Transmembrane Transporter Component; TRAP Transporter Small Subunit; TRAP C4-Dicarboxylate Transport System DctQ Subunit; Tripartite ATP-Independent Periplasmic Protein; TRAP Dicarboxylate Transporter Subunit DctQ; Permease Protein; Tripartite ATP-Independent Periplasmic; TRAP Dicarboxylate Family Transporter DctQ Subunit; C4-Dicarboxylate Transporter Small Subunit; Small Permease Of TRAP-Type Transporter; Trap-Type Transport System Small Permease Component; TRAP Dicarboxylate Transporter

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MEILCKLERLINRISGATGWLAGWLCVLMIGVVFTDVITRYFFHGGSIAMQELEWHLFAAIFLLGAAYVVREDANVRVDI
IYAHLKPRRKAIIDICGYLIFVIPMCTLILYSSWDFVSYSYQLQETSSDPGGLPYRFAFKALLPIGYGLVLIQSLAEILR
NLRLLAEKHNPPLTDYAAPQQKES

Sequences:

>Translated_184_residues
MEILCKLERLINRISGATGWLAGWLCVLMIGVVFTDVITRYFFHGGSIAMQELEWHLFAAIFLLGAAYVVREDANVRVDI
IYAHLKPRRKAIIDICGYLIFVIPMCTLILYSSWDFVSYSYQLQETSSDPGGLPYRFAFKALLPIGYGLVLIQSLAEILR
NLRLLAEKHNPPLTDYAAPQQKES
>Mature_184_residues
MEILCKLERLINRISGATGWLAGWLCVLMIGVVFTDVITRYFFHGGSIAMQELEWHLFAAIFLLGAAYVVREDANVRVDI
IYAHLKPRRKAIIDICGYLIFVIPMCTLILYSSWDFVSYSYQLQETSSDPGGLPYRFAFKALLPIGYGLVLIQSLAEILR
NLRLLAEKHNPPLTDYAAPQQKES

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20875; Mature: 20875

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILCKLERLINRISGATGWLAGWLCVLMIGVVFTDVITRYFFHGGSIAMQELEWHLFAA
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IFLLGAAYVVREDANVRVDIIYAHLKPRRKAIIDICGYLIFVIPMCTLILYSSWDFVSYS
HHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEE
YQLQETSSDPGGLPYRFAFKALLPIGYGLVLIQSLAEILRNLRLLAEKHNPPLTDYAAPQ
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
QKES
CCCC
>Mature Secondary Structure
MEILCKLERLINRISGATGWLAGWLCVLMIGVVFTDVITRYFFHGGSIAMQELEWHLFAA
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IFLLGAAYVVREDANVRVDIIYAHLKPRRKAIIDICGYLIFVIPMCTLILYSSWDFVSYS
HHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEE
YQLQETSSDPGGLPYRFAFKALLPIGYGLVLIQSLAEILRNLRLLAEKHNPPLTDYAAPQ
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
QKES
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA