| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is 114330510
Identifier: 114330510
GI number: 114330510
Start: 505322
End: 506062
Strand: Direct
Name: 114330510
Synonym: Neut_0491
Alternate gene names: NA
Gene position: 505322-506062 (Clockwise)
Preceding gene: 114330505
Following gene: 114330518
Centisome position: 18.99
GC content: 49.26
Gene sequence:
>741_bases ATGTCTGTATTACCTACTCCGCAACAAAACCATCTATTAGCTGCGTTGCCGGCCGAAGTTCAGGACCGTATATTTCCTCA TCTCGAACTGGTCTCACTGCCGCTTGGTAAAGTCTTGTACGAATCAGGGGATACTTTGTGTCATGCCTATTTTCCGACCG ACGCCATCATATCGCTGCTTTATGTGATGGAAAGTGGCGCATCGGCAGAAATCTTGATGGTGGGTAACGATGGTCTCATT AGTGTCGCTTCATTTATGGGAGGTGAAAGCACCCCGAGCCGGGGGATCGTGCAATGCGCTGGTTACGCTTACCGGCTACT AGGGAAGCGGCTCAAGGATGAGTTCGATCGCCACGGTGAATTATTACATCTGATGCTGCGTTATACGCAGGCCTTAATTA CGCAAACGGCCCAGACAGCGGTCTGCAATCGTCACCATTCGATAGACCAACAACTCTGTCGCTTGCTTCTGCTTTTGATG GATCGTTTGCCAGATAACCAGTTGACGATGACTCAGGAGTTGATCGCCAATATGCTTGGGGTGCGCCGTGAAGGCGTTAC CGAAGCCGCCGGAAAACTACAGAAACTGGGAGTGATCGAATACAGCCGCGGACATATCAAGGTATTGGATCGACCCAAAC TTGAGGAATTGAGCTGCGAATGTTATGCCATCGTCAAAAAAGAAGCCGAACGTCTGTTACCCAACATTTATTTTCCTGCA TCTGGCTACAGTTCAGAATGA
Upstream 100 bases:
>100_bases TATCGTGCCCAAAATATGCTTATCCCATATAATATTTTCTTCGTAAACAAGCATCTCATAACGTTTATCTCGTGATCACA CTATATAATCGGAGACTGAT
Downstream 100 bases:
>100_bases GTGCTGGTTAACCAGCACAGTGATCTGTCGTTATTTGATTCTCATATCATTCTTGACAGATTTTACACCCCCAACACTGC GTGCAATTTCGACCGCTCTG
Product: transcriptional regulator, Crp/Fnr family protein
Products: NA
Alternate protein names: CRP/FNR Family Transcriptional Regulator; Crp/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator-Related Protein; Transcriptional Regulator Protein; Regulatory Protein Crp; Regulatory Subunit Of CAMP-Dependent Protein Kinases; Transcription Regulator Crp Family; Transcriptional Regulator CAP/Crp Family; GntR Family Transcriptional Regulator; Transcriptional Regulator Crp/Fnr Family Protein
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MSVLPTPQQNHLLAALPAEVQDRIFPHLELVSLPLGKVLYESGDTLCHAYFPTDAIISLLYVMESGASAEILMVGNDGLI SVASFMGGESTPSRGIVQCAGYAYRLLGKRLKDEFDRHGELLHLMLRYTQALITQTAQTAVCNRHHSIDQQLCRLLLLLM DRLPDNQLTMTQELIANMLGVRREGVTEAAGKLQKLGVIEYSRGHIKVLDRPKLEELSCECYAIVKKEAERLLPNIYFPA SGYSSE
Sequences:
>Translated_246_residues MSVLPTPQQNHLLAALPAEVQDRIFPHLELVSLPLGKVLYESGDTLCHAYFPTDAIISLLYVMESGASAEILMVGNDGLI SVASFMGGESTPSRGIVQCAGYAYRLLGKRLKDEFDRHGELLHLMLRYTQALITQTAQTAVCNRHHSIDQQLCRLLLLLM DRLPDNQLTMTQELIANMLGVRREGVTEAAGKLQKLGVIEYSRGHIKVLDRPKLEELSCECYAIVKKEAERLLPNIYFPA SGYSSE >Mature_245_residues SVLPTPQQNHLLAALPAEVQDRIFPHLELVSLPLGKVLYESGDTLCHAYFPTDAIISLLYVMESGASAEILMVGNDGLIS VASFMGGESTPSRGIVQCAGYAYRLLGKRLKDEFDRHGELLHLMLRYTQALITQTAQTAVCNRHHSIDQQLCRLLLLLMD RLPDNQLTMTQELIANMLGVRREGVTEAAGKLQKLGVIEYSRGHIKVLDRPKLEELSCECYAIVKKEAERLLPNIYFPAS GYSSE
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27355; Mature: 27224
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLPTPQQNHLLAALPAEVQDRIFPHLELVSLPLGKVLYESGDTLCHAYFPTDAIISLL CCCCCCCCCCCEEEECCHHHHHHHCCCHHHHHCCHHHHHHHCCCCEEEEECCHHHHHHHH YVMESGASAEILMVGNDGLISVASFMGGESTPSRGIVQCAGYAYRLLGKRLKDEFDRHGE HHHHCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLHLMLRYTQALITQTAQTAVCNRHHSIDQQLCRLLLLLMDRLPDNQLTMTQELIANMLG HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VRREGVTEAAGKLQKLGVIEYSRGHIKVLDRPKLEELSCECYAIVKKEAERLLPNIYFPA HHHCCHHHHHHHHHHCCCEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEECCC SGYSSE CCCCCC >Mature Secondary Structure SVLPTPQQNHLLAALPAEVQDRIFPHLELVSLPLGKVLYESGDTLCHAYFPTDAIISLL CCCCCCCCCCEEEECCHHHHHHHCCCHHHHHCCHHHHHHHCCCCEEEEECCHHHHHHHH YVMESGASAEILMVGNDGLISVASFMGGESTPSRGIVQCAGYAYRLLGKRLKDEFDRHGE HHHHCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLHLMLRYTQALITQTAQTAVCNRHHSIDQQLCRLLLLLMDRLPDNQLTMTQELIANMLG HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VRREGVTEAAGKLQKLGVIEYSRGHIKVLDRPKLEELSCECYAIVKKEAERLLPNIYFPA HHHCCHHHHHHHHHHCCCEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEECCC SGYSSE CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA