| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is gltX
Identifier: 114330518
GI number: 114330518
Start: 513261
End: 514652
Strand: Direct
Name: gltX
Synonym: Neut_0499
Alternate gene names: 114330518
Gene position: 513261-514652 (Clockwise)
Preceding gene: 114330510
Following gene: 114330519
Centisome position: 19.29
GC content: 50.65
Gene sequence:
>1392_bases ATGGTAAAAACACGTTTTGCTCCCAGTCCAACCGGTTACCTGCATATTGGCGGTGCACGCACTGCGCTTTTTTCCTGGGC GTTTGCCCGGAAACAAGGTGGAAAATTTATTCTGAGAATCGAGGATACTGATCTTGAACGTTCTACCCAGCAATCTGTGC AGGCGATTCTCGATGGGATGGCCTGGCTGGGGCTTGATTATGATGAGGGGCCGTATTACCAGATGCAGCGGTTGAGTCGC TACCAGGAAGTTGCGGAGCTATTGCTCAAGCAGGGACTTGCTTATCGTTGTTATGCCAGTAAGGAAGAGCTGGATGCGCT GCGTGAACAGCAGCGTTTGGCCGGGTTGAAGCCGCGTTATGATGGCCGCTGGCGCGATAGCAAGCAGACTCCGCCAGCTG GTGTCACGCCGGTAGTGCGCTTTAAAACGCCACGTGAAGGGTATGCGGTATTTGATGATCTGGTTAAGGGGCGGATCGCG GTAGCCAATCATGAGCTGGATGATCTGGTATTAATGCGAAGTGACGGCACGCCTACCTACAATTTTGGAGTGGTGCTGGA TGATCTTGATATGGGTGTTACACACGTTATCCGTGGGGATGATCATGTCAACAATACTCCTCGTCAAATCAATATCCTCA AGGCACTGGGGGCGATCATTCCACAATACGCACATGTACCGATGATTCTTGGCGCAGATGGTGAGCGTTTATCTAAACGG CATGGCGCGGTATCCGTGATGCATTACCGGGATCAGGGATACCTGCCGGAAGCCTTGATCAACTATCTGGCACGACTCGG GTGGTCACACGGAGATGAGGAAATTTTCAGCCAGGAACAATTAGTTGAATGGTTTGATCTGGCGGCAATCAATCGTTCGC CGGCGAAATTTAATCCGGAAAAATTGACCTGGCTGAACCAGCATTATCTGAAAATTGCCGAGGATGCCCGGTTGATGGAA CTGGTTACACCCATTCTGCTGGGAAGAAAATACAGCCTGCCGGGAGAGGAAAATATGTTTAAAATCATCAACCTGCTTAA AGAGCGTGTCAGCACGATAGAAGAGCTGGCCGACGCATCTGCTTATTTTTTTCAAGCCGTCGAGCCTGCCGAAGCGCTCA GAACGCAGTATTTCACCGTTGAAATTCGTCCGGTTCTGGAATACCTGATTGATCGTCTGGCGCAGATTGAATGGAAGCGA GAAGCGATTCACCAAGAAATTAAACAGACCGTTTCCTCACATAAGCTGAAGTTTCCCAACTTGGCGATGCCGCTGCGTGT CATGGTCACGGGTGAAGCACAAACTCCGGCGATTGACGCAGTGCTGGAGCTGATTGGTAAAGAAGAAACTCTGCACCGTT TGCGTGACCAGCTGGATGCGTTTCCGCAGTAA
Upstream 100 bases:
>100_bases CAGCTCAAAAAATATTTCCTCCAGAGGAATCAGCAAGGATTTCCTGGTATGGAAACAACCGTGTAAACGGTTGTGTATAC AACTTCTAATATTTAGTCAG
Downstream 100 bases:
>100_bases GCATACAGCTGCCGTATTTATTTTGACTAAAAATTCCCGTTTGAAGAGCTGTTATGACAATGTCTGATCGTGCTGATTTG CTGAAACAATTACTTGCCGA
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MVKTRFAPSPTGYLHIGGARTALFSWAFARKQGGKFILRIEDTDLERSTQQSVQAILDGMAWLGLDYDEGPYYQMQRLSR YQEVAELLLKQGLAYRCYASKEELDALREQQRLAGLKPRYDGRWRDSKQTPPAGVTPVVRFKTPREGYAVFDDLVKGRIA VANHELDDLVLMRSDGTPTYNFGVVLDDLDMGVTHVIRGDDHVNNTPRQINILKALGAIIPQYAHVPMILGADGERLSKR HGAVSVMHYRDQGYLPEALINYLARLGWSHGDEEIFSQEQLVEWFDLAAINRSPAKFNPEKLTWLNQHYLKIAEDARLME LVTPILLGRKYSLPGEENMFKIINLLKERVSTIEELADASAYFFQAVEPAEALRTQYFTVEIRPVLEYLIDRLAQIEWKR EAIHQEIKQTVSSHKLKFPNLAMPLRVMVTGEAQTPAIDAVLELIGKEETLHRLRDQLDAFPQ
Sequences:
>Translated_463_residues MVKTRFAPSPTGYLHIGGARTALFSWAFARKQGGKFILRIEDTDLERSTQQSVQAILDGMAWLGLDYDEGPYYQMQRLSR YQEVAELLLKQGLAYRCYASKEELDALREQQRLAGLKPRYDGRWRDSKQTPPAGVTPVVRFKTPREGYAVFDDLVKGRIA VANHELDDLVLMRSDGTPTYNFGVVLDDLDMGVTHVIRGDDHVNNTPRQINILKALGAIIPQYAHVPMILGADGERLSKR HGAVSVMHYRDQGYLPEALINYLARLGWSHGDEEIFSQEQLVEWFDLAAINRSPAKFNPEKLTWLNQHYLKIAEDARLME LVTPILLGRKYSLPGEENMFKIINLLKERVSTIEELADASAYFFQAVEPAEALRTQYFTVEIRPVLEYLIDRLAQIEWKR EAIHQEIKQTVSSHKLKFPNLAMPLRVMVTGEAQTPAIDAVLELIGKEETLHRLRDQLDAFPQ >Mature_463_residues MVKTRFAPSPTGYLHIGGARTALFSWAFARKQGGKFILRIEDTDLERSTQQSVQAILDGMAWLGLDYDEGPYYQMQRLSR YQEVAELLLKQGLAYRCYASKEELDALREQQRLAGLKPRYDGRWRDSKQTPPAGVTPVVRFKTPREGYAVFDDLVKGRIA VANHELDDLVLMRSDGTPTYNFGVVLDDLDMGVTHVIRGDDHVNNTPRQINILKALGAIIPQYAHVPMILGADGERLSKR HGAVSVMHYRDQGYLPEALINYLARLGWSHGDEEIFSQEQLVEWFDLAAINRSPAKFNPEKLTWLNQHYLKIAEDARLME LVTPILLGRKYSLPGEENMFKIINLLKERVSTIEELADASAYFFQAVEPAEALRTQYFTVEIRPVLEYLIDRLAQIEWKR EAIHQEIKQTVSSHKLKFPNLAMPLRVMVTGEAQTPAIDAVLELIGKEETLHRLRDQLDAFPQ
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=486, Percent_Identity=31.4814814814815, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI4826960, Length=299, Percent_Identity=26.0869565217391, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI62241042, Length=235, Percent_Identity=26.8085106382979, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1788743, Length=461, Percent_Identity=52.2776572668113, Blast_Score=500, Evalue=1e-143, Organism=Escherichia coli, GI226510925, Length=281, Percent_Identity=33.0960854092527, Blast_Score=129, Evalue=3e-31, Organism=Caenorhabditis elegans, GI71993394, Length=477, Percent_Identity=31.4465408805031, Blast_Score=224, Evalue=6e-59, Organism=Saccharomyces cerevisiae, GI6324540, Length=500, Percent_Identity=33, Blast_Score=254, Evalue=1e-68, Organism=Saccharomyces cerevisiae, GI6324742, Length=133, Percent_Identity=31.5789473684211, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6321192, Length=215, Percent_Identity=27.906976744186, Blast_Score=70, Evalue=7e-13, Organism=Drosophila melanogaster, GI24665321, Length=486, Percent_Identity=32.9218106995885, Blast_Score=269, Evalue=4e-72,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_NITEC (Q0AIP6)
Other databases:
- EMBL: CP000450 - RefSeq: YP_746740.1 - ProteinModelPortal: Q0AIP6 - SMR: Q0AIP6 - STRING: Q0AIP6 - GeneID: 4272478 - GenomeReviews: CP000450_GR - KEGG: net:Neut_0499 - NMPDR: fig|335283.3.peg.1376 - eggNOG: COG0008 - HOGENOM: HBG628189 - OMA: NEIFAKR - PhylomeDB: Q0AIP6 - ProtClustDB: PRK01406 - BioCyc: NEUT335283:NEUT_0499-MONOMER - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 52848; Mature: 52848
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 239-239
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKTRFAPSPTGYLHIGGARTALFSWAFARKQGGKFILRIEDTDLERSTQQSVQAILDGM CCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHH AWLGLDYDEGPYYQMQRLSRYQEVAELLLKQGLAYRCYASKEELDALREQQRLAGLKPRY HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCCC DGRWRDSKQTPPAGVTPVVRFKTPREGYAVFDDLVKGRIAVANHELDDLVLMRSDGTPTY CCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCCE NFGVVLDDLDMGVTHVIRGDDHVNNTPRQINILKALGAIIPQYAHVPMILGADGERLSKR EEEEEEECCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHH HGAVSVMHYRDQGYLPEALINYLARLGWSHGDEEIFSQEQLVEWFDLAAINRSPAKFNPE CCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH KLTWLNQHYLKIAEDARLMELVTPILLGRKYSLPGEENMFKIINLLKERVSTIEELADAS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AYFFQAVEPAEALRTQYFTVEIRPVLEYLIDRLAQIEWKREAIHQEIKQTVSSHKLKFPN HHHHHHCCHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LAMPLRVMVTGEAQTPAIDAVLELIGKEETLHRLRDQLDAFPQ CCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MVKTRFAPSPTGYLHIGGARTALFSWAFARKQGGKFILRIEDTDLERSTQQSVQAILDGM CCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHH AWLGLDYDEGPYYQMQRLSRYQEVAELLLKQGLAYRCYASKEELDALREQQRLAGLKPRY HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCCC DGRWRDSKQTPPAGVTPVVRFKTPREGYAVFDDLVKGRIAVANHELDDLVLMRSDGTPTY CCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCCE NFGVVLDDLDMGVTHVIRGDDHVNNTPRQINILKALGAIIPQYAHVPMILGADGERLSKR EEEEEEECCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHH HGAVSVMHYRDQGYLPEALINYLARLGWSHGDEEIFSQEQLVEWFDLAAINRSPAKFNPE CCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH KLTWLNQHYLKIAEDARLMELVTPILLGRKYSLPGEENMFKIINLLKERVSTIEELADAS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AYFFQAVEPAEALRTQYFTVEIRPVLEYLIDRLAQIEWKREAIHQEIKQTVSSHKLKFPN HHHHHHCCHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LAMPLRVMVTGEAQTPAIDAVLELIGKEETLHRLRDQLDAFPQ CCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA