Click here to switch to the map view.

The map label for this gene is cmk

Identifier: 114330420

GI number: 114330420

Start: 406165

End: 406839

Strand: Direct

Name: cmk

Synonym: Neut_0399

Alternate gene names: 114330420

Gene position: 406165-406839 (Clockwise)

Preceding gene: 114330419

Following gene: 114330421

Centisome position: 15.26

GC content: 50.37

Gene sequence:

>675_bases
ATGAAAAATCAATATGTTCCGGTAATTACACTGGATGGTCCTTCCGCATCAGGGAAAGGTACAATCGCCCGTCTTGTATC
ACAGGCGCTCGGGTTTCATTATCTTGATAGCGGTGCACTTTATCGTCTGGTGGCGCTGGCTGCCATGAAGCGCGGTGTAG
ATGCCGGTGATGAGCAAGGAGTGGTTGGTATTGCCCGGAGTCTGGATGTGTCTTTTGCAGATTCATCAATCAGGCTGGAC
GGGATAGATGTAAGTGATGAGATCCGCGCAGAAGCATGCGGAGAGTATGCTTCTAAAATCGCACAATATTCTGCGCTCAG
AGTGGAACTGCTGGAGCGTCAGCGGGATCTCCGTAAACTACCGGGTCTGGTGGCTGACGGACGCGACATGGGATCAGTCA
TTTTTCCTGATGCCACTTTGAAAATTTATCTTACTGCCAATGAAGAAGAGCGCGCGCGTCGGCGTCATAAGCAGTTGATG
GAGAAGGGAATAAATGCTAGTATCGCGCATCTTGTCCTGGCTCTTCGCGAGCGTGATGAGCGTGACAGCAAGCGTGTTGC
GTCGCCACTGCAACAGTGTGAAGATACACGTTTGCTGGATACAACTGGCCTCAATATAGATCAGGTTGTCGGCAAGGTAT
TGGGTATGTATGCTGACTCCGGTAGTATTGAGTGA

Upstream 100 bases:

>100_bases
ACAGCCATTACACACCAATAATTTCCAGAAGTGTATTGAACCCAAATTTCACAAGCAACAATTTAAATACCGGAAGTATC
TTGCTTGGATCGAGTGAACC

Downstream 100 bases:

>100_bases
CTTTGGAATTTAAGTTTTTCAGTTGTTATTTTTATTAACCAACCAACCTGTCCCCTTTTGTTTTTTAGAGGGGAATTGTT
TACGATCGGGTATTTTTTAA

Product: cytidylate kinase

Products: NA

Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MKNQYVPVITLDGPSASGKGTIARLVSQALGFHYLDSGALYRLVALAAMKRGVDAGDEQGVVGIARSLDVSFADSSIRLD
GIDVSDEIRAEACGEYASKIAQYSALRVELLERQRDLRKLPGLVADGRDMGSVIFPDATLKIYLTANEEERARRRHKQLM
EKGINASIAHLVLALRERDERDSKRVASPLQQCEDTRLLDTTGLNIDQVVGKVLGMYADSGSIE

Sequences:

>Translated_224_residues
MKNQYVPVITLDGPSASGKGTIARLVSQALGFHYLDSGALYRLVALAAMKRGVDAGDEQGVVGIARSLDVSFADSSIRLD
GIDVSDEIRAEACGEYASKIAQYSALRVELLERQRDLRKLPGLVADGRDMGSVIFPDATLKIYLTANEEERARRRHKQLM
EKGINASIAHLVLALRERDERDSKRVASPLQQCEDTRLLDTTGLNIDQVVGKVLGMYADSGSIE
>Mature_224_residues
MKNQYVPVITLDGPSASGKGTIARLVSQALGFHYLDSGALYRLVALAAMKRGVDAGDEQGVVGIARSLDVSFADSSIRLD
GIDVSDEIRAEACGEYASKIAQYSALRVELLERQRDLRKLPGLVADGRDMGSVIFPDATLKIYLTANEEERARRRHKQLM
EKGINASIAHLVLALRERDERDSKRVASPLQQCEDTRLLDTTGLNIDQVVGKVLGMYADSGSIE

Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]

COG id: COG0283

COG function: function code F; Cytidylate kinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily

Homologues:

Organism=Escherichia coli, GI1787139, Length=212, Percent_Identity=48.5849056603774, Blast_Score=206, Evalue=9e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): KCY_NITEC (Q0AIZ4)

Other databases:

- EMBL:   CP000450
- RefSeq:   YP_746642.1
- ProteinModelPortal:   Q0AIZ4
- SMR:   Q0AIZ4
- STRING:   Q0AIZ4
- GeneID:   4273461
- GenomeReviews:   CP000450_GR
- KEGG:   net:Neut_0399
- NMPDR:   fig|335283.3.peg.1994
- eggNOG:   COG0283
- HOGENOM:   HBG354377
- OMA:   DIGTVIC
- PhylomeDB:   Q0AIZ4
- ProtClustDB:   PRK00023
- BioCyc:   NEUT335283:NEUT_0399-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00238
- InterPro:   IPR003136
- InterPro:   IPR011994
- PANTHER:   PTHR21299:SF2
- TIGRFAMs:   TIGR00017

Pfam domain/function: PF02224 Cytidylate_kin

EC number: =2.7.4.14

Molecular weight: Translated: 24447; Mature: 24447

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNQYVPVITLDGPSASGKGTIARLVSQALGFHYLDSGALYRLVALAAMKRGVDAGDEQG
CCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHCCCCCCCCC
VVGIARSLDVSFADSSIRLDGIDVSDEIRAEACGEYASKIAQYSALRVELLERQRDLRKL
HHHHHHHCCCEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGLVADGRDMGSVIFPDATLKIYLTANEEERARRRHKQLMEKGINASIAHLVLALRERDE
CCCCCCCCCCCCEECCCCEEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
RDSKRVASPLQQCEDTRLLDTTGLNIDQVVGKVLGMYADSGSIE
HHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKNQYVPVITLDGPSASGKGTIARLVSQALGFHYLDSGALYRLVALAAMKRGVDAGDEQG
CCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHCCCCCCCCC
VVGIARSLDVSFADSSIRLDGIDVSDEIRAEACGEYASKIAQYSALRVELLERQRDLRKL
HHHHHHHCCCEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGLVADGRDMGSVIFPDATLKIYLTANEEERARRRHKQLMEKGINASIAHLVLALRERDE
CCCCCCCCCCCCEECCCCEEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
RDSKRVASPLQQCEDTRLLDTTGLNIDQVVGKVLGMYADSGSIE
HHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA