Click here to switch to the map view.

The map label for this gene is flgB [H]

Identifier: 114330358

GI number: 114330358

Start: 341923

End: 342333

Strand: Direct

Name: flgB [H]

Synonym: Neut_0335

Alternate gene names: 114330358

Gene position: 341923-342333 (Clockwise)

Preceding gene: 114330354

Following gene: 114330359

Centisome position: 12.85

GC content: 48.66

Gene sequence:

>411_bases
ATGATCAACAAACTGGACAATCTGCTTGGCTTTAACCAAAAGGCACTCGGGTTACGAGCGGCCCGGCAGGAGCTGTTGTC
GGGAAATATTGCCAATGCGGATACCCCGAGTTTTAAGGCGAAAGATTTCGATTTTTCCAAGGCAATGCAAAACGTTCAGT
CGCCAAGACAGGTACAAAGTGCGCTGGCGACGACTTCATCAAGACATATCGGCTTGTCCGATTTCAGATCGATTACGTCC
GTGCCGGAGCAGTATCGTGTTCCGCAGCAACCCAGTATAGACGGTAATACCGTTGATATGGATACCGAGCGTATGCAGTT
TATGGATAACGCCATACGCTATGACGCTGGACTGACATTTATCAGCGGCCAGTTCCGAACCCTGTTATCCGCTATCAGAG
AAGGAAATTAA

Upstream 100 bases:

>100_bases
GATTATGGATCAGTTTGATTGATTGGCTGGAAATAATGGCTTGTTCAATTTGGCATGGTTCCTGCTTATAGTAATTATGA
CTACTTTGCAGGAGGAAAAC

Downstream 100 bases:

>100_bases
TAGCCATGTCCCTGTTCAGTGTATTCAATGTCGCCGGTTCAGCCATGGCCGCCCAGTCACAGCGGCTGAATGTGGTGGCC
AGTAATCTCGCCAATGCAGA

Product: flagellar basal-body rod protein FlgB

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MINKLDNLLGFNQKALGLRAARQELLSGNIANADTPSFKAKDFDFSKAMQNVQSPRQVQSALATTSSRHIGLSDFRSITS
VPEQYRVPQQPSIDGNTVDMDTERMQFMDNAIRYDAGLTFISGQFRTLLSAIREGN

Sequences:

>Translated_136_residues
MINKLDNLLGFNQKALGLRAARQELLSGNIANADTPSFKAKDFDFSKAMQNVQSPRQVQSALATTSSRHIGLSDFRSITS
VPEQYRVPQQPSIDGNTVDMDTERMQFMDNAIRYDAGLTFISGQFRTLLSAIREGN
>Mature_136_residues
MINKLDNLLGFNQKALGLRAARQELLSGNIANADTPSFKAKDFDFSKAMQNVQSPRQVQSALATTSSRHIGLSDFRSITS
VPEQYRVPQQPSIDGNTVDMDTERMQFMDNAIRYDAGLTFISGQFRTLLSAIREGN

Specific function: Unknown

COG id: COG1815

COG function: function code N; Flagellar basal body protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787313, Length=139, Percent_Identity=48.2014388489209, Blast_Score=129, Evalue=1e-31,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006300 [H]

Pfam domain/function: PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15116; Mature: 15116

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINKLDNLLGFNQKALGLRAARQELLSGNIANADTPSFKAKDFDFSKAMQNVQSPRQVQS
CCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHH
ALATTSSRHIGLSDFRSITSVPEQYRVPQQPSIDGNTVDMDTERMQFMDNAIRYDAGLTF
HHHHHCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHH
ISGQFRTLLSAIREGN
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MINKLDNLLGFNQKALGLRAARQELLSGNIANADTPSFKAKDFDFSKAMQNVQSPRQVQS
CCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHH
ALATTSSRHIGLSDFRSITSVPEQYRVPQQPSIDGNTVDMDTERMQFMDNAIRYDAGLTF
HHHHHCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHH
ISGQFRTLLSAIREGN
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]