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The map label for this gene is flgC [H]

Identifier: 114330359

GI number: 114330359

Start: 342339

End: 342743

Strand: Direct

Name: flgC [H]

Synonym: Neut_0336

Alternate gene names: 114330359

Gene position: 342339-342743 (Clockwise)

Preceding gene: 114330358

Following gene: 114330360

Centisome position: 12.86

GC content: 50.86

Gene sequence:

>405_bases
ATGTCCCTGTTCAGTGTATTCAATGTCGCCGGTTCAGCCATGGCCGCCCAGTCACAGCGGCTGAATGTGGTGGCCAGTAA
TCTCGCCAATGCAGACAGCGCTACCAGTTCAACGGGTGAAGCCTATCGTTCCCGGCAAGTTGTTTTTCGTACCGTTGATA
TTTCTGCAGATAAGGCAAAGGGCGTCAAGGTGGCAGGTATCGTGCATGATCCCTCGCCCATGCGGGTGGTGTATGACCCG
AAGCATCCGATGGCGGACGAAAAAGGCTACGTTACCCTGCCCAATGTCAACGTTGTGGATGAAATGGTCAATATGATGTC
GGCATCGCGTTCCTATCAGAACAGCGTTGACATGATGAACGTGACCAAAACATTGCTGCAAAAAACACTATCAATTGGCC
AATAA

Upstream 100 bases:

>100_bases
AGTTTATGGATAACGCCATACGCTATGACGCTGGACTGACATTTATCAGCGGCCAGTTCCGAACCCTGTTATCCGCTATC
AGAGAAGGAAATTAATAGCC

Downstream 100 bases:

>100_bases
GGAGAGATAGATATGAGTCAGGTGCAAAACAATTCCAGCGTATCCGAACTGCTGACTTCCAATGGGGGCAGTATCAAGAC
TGCCCGCAAGGGTGATGAGG

Product: flagellar basal-body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MSLFSVFNVAGSAMAAQSQRLNVVASNLANADSATSSTGEAYRSRQVVFRTVDISADKAKGVKVAGIVHDPSPMRVVYDP
KHPMADEKGYVTLPNVNVVDEMVNMMSASRSYQNSVDMMNVTKTLLQKTLSIGQ

Sequences:

>Translated_134_residues
MSLFSVFNVAGSAMAAQSQRLNVVASNLANADSATSSTGEAYRSRQVVFRTVDISADKAKGVKVAGIVHDPSPMRVVYDP
KHPMADEKGYVTLPNVNVVDEMVNMMSASRSYQNSVDMMNVTKTLLQKTLSIGQ
>Mature_133_residues
SLFSVFNVAGSAMAAQSQRLNVVASNLANADSATSSTGEAYRSRQVVFRTVDISADKAKGVKVAGIVHDPSPMRVVYDPK
HPMADEKGYVTLPNVNVVDEMVNMMSASRSYQNSVDMMNVTKTLLQKTLSIGQ

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=134, Percent_Identity=54.4776119402985, Blast_Score=156, Evalue=4e-40,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14445; Mature: 14313

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFSVFNVAGSAMAAQSQRLNVVASNLANADSATSSTGEAYRSRQVVFRTVDISADKAK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCEEEEEEEECCCCCCC
GVKVAGIVHDPSPMRVVYDPKHPMADEKGYVTLPNVNVVDEMVNMMSASRSYQNSVDMMN
CEEEEEEEECCCCCEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
VTKTLLQKTLSIGQ
HHHHHHHHHHHCCC
>Mature Secondary Structure 
SLFSVFNVAGSAMAAQSQRLNVVASNLANADSATSSTGEAYRSRQVVFRTVDISADKAK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCEEEEEEEECCCCCCC
GVKVAGIVHDPSPMRVVYDPKHPMADEKGYVTLPNVNVVDEMVNMMSASRSYQNSVDMMN
CEEEEEEEECCCCCEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
VTKTLLQKTLSIGQ
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA