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The map label for this gene is 114330355

Identifier: 114330355

GI number: 114330355

Start: 339381

End: 339710

Strand: Reverse

Name: 114330355

Synonym: Neut_0332

Alternate gene names: NA

Gene position: 339710-339381 (Counterclockwise)

Preceding gene: 114330356

Following gene: 114330353

Centisome position: 12.77

GC content: 52.12

Gene sequence:

>330_bases
GTGTCGATAGACAGAGCCACACGTTGGGTGTATGTGGCCATCAAACCCAACAAAACCGCAGCCAGTGCCAGAGCATTTCT
GAAGGCGCTGCACAATGCCCGTCCGATCAGGATTACCCGTATCCTGACAAACAACGGCAAGGAATTTACTGACAGACTGT
TTGCCAGCCGTGAACGTAATCCCAGTGGCAATCATCAGTTTGACCAGCTGTGCCAGGAACTCGGTATCGGACATCGCCTG
ACCCGGCCACGCACTGCGCAAACCAATGGGATAGTCGAACGTTTCAATGGGCGTATTGCTGACGTACTCAAGACAACATC
GATTCAATAG

Upstream 100 bases:

>100_bases
AATAATCCATAGATACCGGCATTTCATTTATCGACCAGCCTGAGCTGGTTGATAAAAGGAGTTCTGTCACAAATATTCGT
CAAGTGCAAAGCCACAGTTT

Downstream 100 bases:

>100_bases
CGCTGAAAATCTGGAACAGACCCTGATACGTTATGTCAGCCTGTAAACCCGCAACTACCGCAGTCTGCCCTCAAGAGTAA
AGCTCCAATGCAGGCCATGA

Product: integrase, catalytic region

Products: NA

Alternate protein names: Integrase Catalytic Region; Transposase; Integrase Catalytic Domain-Containing Protein; Integrase; ISKpn8 Transposase

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSIDRATRWVYVAIKPNKTAASARAFLKALHNARPIRITRILTNNGKEFTDRLFASRERNPSGNHQFDQLCQELGIGHRL
TRPRTAQTNGIVERFNGRIADVLKTTSIQ

Sequences:

>Translated_109_residues
MSIDRATRWVYVAIKPNKTAASARAFLKALHNARPIRITRILTNNGKEFTDRLFASRERNPSGNHQFDQLCQELGIGHRL
TRPRTAQTNGIVERFNGRIADVLKTTSIQ
>Mature_108_residues
SIDRATRWVYVAIKPNKTAASARAFLKALHNARPIRITRILTNNGKEFTDRLFASRERNPSGNHQFDQLCQELGIGHRLT
RPRTAQTNGIVERFNGRIADVLKTTSIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12386; Mature: 12255

Theoretical pI: Translated: 11.99; Mature: 11.99

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIDRATRWVYVAIKPNKTAASARAFLKALHNARPIRITRILTNNGKEFTDRLFASRERN
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHCCCC
PSGNHQFDQLCQELGIGHRLTRPRTAQTNGIVERFNGRIADVLKTTSIQ
CCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure 
SIDRATRWVYVAIKPNKTAASARAFLKALHNARPIRITRILTNNGKEFTDRLFASRERN
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHCCCC
PSGNHQFDQLCQELGIGHRLTRPRTAQTNGIVERFNGRIADVLKTTSIQ
CCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA