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The map label for this gene is atpH

Identifier: 114330301

GI number: 114330301

Start: 284273

End: 284809

Strand: Direct

Name: atpH

Synonym: Neut_0274

Alternate gene names: 114330301

Gene position: 284273-284809 (Clockwise)

Preceding gene: 114330300

Following gene: 114330302

Centisome position: 10.68

GC content: 43.2

Gene sequence:

>537_bases
ATGGCTGAAGCGATAACAATAGCACGACCGTATGCAGAGGCAGTTTTCAGACTTGCTCAAGGAAGTGGATCTTTGTCACT
CTGGTCGGAGATGCTTGGGATTGTCAGCTCTGTTATTCAGGAATCTCAGGTAAATGCTTTAATCGGCAACCCACAAATCC
CATCAATAAAACTGCGTGAAATCGTTTTCAGTATTTGTGATAAAGAACTAAATGAAGATGGAAGGCGTTTAATTTCATTG
TTGATTGAAAATGGACGGCTACTTGTATTGCCGCAGATAAGCGAGCTGTATGAGCAGCTTAAGGCGCAACATGAGAGTGT
GCTTGAAGCGGAAATAGTATCAGCATTTCCTCTTGAATCGTATCAGCTGGAAAAGCTAATATCGGTTCTGGAGGTAAAAT
TTCAGCATAAAGTAAAGGCTCAGGTAAGTGTGGATAGTGGGCTTATTGGTGGCGTAAAAATTGAAATCGGTGACCAGGTG
ATTGACAGTTCTGTGTCCGGAAAGCTGGAAGCTATGGCGGCGACTCTCAAAAGCTAG

Upstream 100 bases:

>100_bases
GGGATTGGCGGTGCAAGGTGCTTCAAAAATTCTACGTCGTGAAGTAAATGCCAAGGCTCATGCTGATCTACTGGCATCAA
TAGAGACAGAGTTAAAATAA

Downstream 100 bases:

>100_bases
GAGTGATATAAAATGCAGTTAAATCCATCAGAAATCAGTGAATTAATCAAGAGTAAAATTGAAGGCCTTTCCGTTACATC
GGAATTTCGTACGCAAGGAA

Product: ATP synthase F1, delta subunit

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MAEAITIARPYAEAVFRLAQGSGSLSLWSEMLGIVSSVIQESQVNALIGNPQIPSIKLREIVFSICDKELNEDGRRLISL
LIENGRLLVLPQISELYEQLKAQHESVLEAEIVSAFPLESYQLEKLISVLEVKFQHKVKAQVSVDSGLIGGVKIEIGDQV
IDSSVSGKLEAMAATLKS

Sequences:

>Translated_178_residues
MAEAITIARPYAEAVFRLAQGSGSLSLWSEMLGIVSSVIQESQVNALIGNPQIPSIKLREIVFSICDKELNEDGRRLISL
LIENGRLLVLPQISELYEQLKAQHESVLEAEIVSAFPLESYQLEKLISVLEVKFQHKVKAQVSVDSGLIGGVKIEIGDQV
IDSSVSGKLEAMAATLKS
>Mature_177_residues
AEAITIARPYAEAVFRLAQGSGSLSLWSEMLGIVSSVIQESQVNALIGNPQIPSIKLREIVFSICDKELNEDGRRLISLL
IENGRLLVLPQISELYEQLKAQHESVLEAEIVSAFPLESYQLEKLISVLEVKFQHKVKAQVSVDSGLIGGVKIEIGDQVI
DSSVSGKLEAMAATLKS

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Escherichia coli, GI1790173, Length=178, Percent_Identity=37.6404494382022, Blast_Score=125, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_NITEC (Q0AJB3)

Other databases:

- EMBL:   CP000450
- RefSeq:   YP_746523.1
- ProteinModelPortal:   Q0AJB3
- SMR:   Q0AJB3
- STRING:   Q0AJB3
- GeneID:   4272117
- GenomeReviews:   CP000450_GR
- KEGG:   net:Neut_0274
- NMPDR:   fig|335283.3.peg.2147
- eggNOG:   COG0712
- HOGENOM:   HBG668108
- OMA:   ASLERKF
- PhylomeDB:   Q0AJB3
- ProtClustDB:   CLSK585214
- BioCyc:   NEUT335283:NEUT_0274-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 19403; Mature: 19272

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEAITIARPYAEAVFRLAQGSGSLSLWSEMLGIVSSVIQESQVNALIGNPQIPSIKLRE
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
IVFSICDKELNEDGRRLISLLIENGRLLVLPQISELYEQLKAQHESVLEAEIVSAFPLES
HHHHHHHHHHCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCH
YQLEKLISVLEVKFQHKVKAQVSVDSGLIGGVKIEIGDQVIDSSVSGKLEAMAATLKS
HHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEECHHHHHHHHCHHHHHHHHHHCC
>Mature Secondary Structure 
AEAITIARPYAEAVFRLAQGSGSLSLWSEMLGIVSSVIQESQVNALIGNPQIPSIKLRE
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
IVFSICDKELNEDGRRLISLLIENGRLLVLPQISELYEQLKAQHESVLEAEIVSAFPLES
HHHHHHHHHHCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCH
YQLEKLISVLEVKFQHKVKAQVSVDSGLIGGVKIEIGDQVIDSSVSGKLEAMAATLKS
HHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEECHHHHHHHHCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA