Click here to switch to the map view.

The map label for this gene is atpF

Identifier: 114330300

GI number: 114330300

Start: 283799

End: 284272

Strand: Direct

Name: atpF

Synonym: Neut_0273

Alternate gene names: 114330300

Gene position: 283799-284272 (Clockwise)

Preceding gene: 114330299

Following gene: 114330301

Centisome position: 10.66

GC content: 44.09

Gene sequence:

>474_bases
ATGAATATAAATTTCACATTGGTCTCGCAAGCGATAGCTTTTTCCATATTTATATGGTTTACCACAAAATTTGTGTGGCC
GTATTTGTTGCGTGCTATTGAAGAGCGTCAGCAGAAAATAGCGGATGGCTTGGCAGCAGGTGAGCGTGGTAAGAAGGAAT
TGGAGCTTGCCAGCCAGCGTTCATCAGAGGTATTGAAAGAAGCCAAGCAGCGTGCGGGTGAGATCGTTATTCAGGCGGAA
AAAAGAGCTTCTGACATCATAGAAGAAGCTAAAAAGAATGCTCGAGTTGAGGGTGAAAAAATTCTAGCCGGAGCTAAAGC
GGAAATTCAGCATGAGATTTTTAGTGCGCGTGAATCATTGCGTCAACAGGTGGCGGGATTGGCGGTGCAAGGTGCTTCAA
AAATTCTACGTCGTGAAGTAAATGCCAAGGCTCATGCTGATCTACTGGCATCAATAGAGACAGAGTTAAAATAA

Upstream 100 bases:

>100_bases
TGCCGTAGGTTTAGCAATGCTTTTTGCATTTGGTAACCCATTGTTAGCTGTTGTTCAGTAAATTATTGAATTAGTTGCCG
AATGTAAATAAGGGGCTGTT

Downstream 100 bases:

>100_bases
ATGGCTGAAGCGATAACAATAGCACGACCGTATGCAGAGGCAGTTTTCAGACTTGCTCAAGGAAGTGGATCTTTGTCACT
CTGGTCGGAGATGCTTGGGA

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MNINFTLVSQAIAFSIFIWFTTKFVWPYLLRAIEERQQKIADGLAAGERGKKELELASQRSSEVLKEAKQRAGEIVIQAE
KRASDIIEEAKKNARVEGEKILAGAKAEIQHEIFSARESLRQQVAGLAVQGASKILRREVNAKAHADLLASIETELK

Sequences:

>Translated_157_residues
MNINFTLVSQAIAFSIFIWFTTKFVWPYLLRAIEERQQKIADGLAAGERGKKELELASQRSSEVLKEAKQRAGEIVIQAE
KRASDIIEEAKKNARVEGEKILAGAKAEIQHEIFSARESLRQQVAGLAVQGASKILRREVNAKAHADLLASIETELK
>Mature_157_residues
MNINFTLVSQAIAFSIFIWFTTKFVWPYLLRAIEERQQKIADGLAAGERGKKELELASQRSSEVLKEAKQRAGEIVIQAE
KRASDIIEEAKKNARVEGEKILAGAKAEIQHEIFSARESLRQQVAGLAVQGASKILRREVNAKAHADLLASIETELK

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

Organism=Escherichia coli, GI1790174, Length=156, Percent_Identity=50.6410256410256, Blast_Score=142, Evalue=8e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_NITEC (Q0AJB4)

Other databases:

- EMBL:   CP000450
- RefSeq:   YP_746522.1
- ProteinModelPortal:   Q0AJB4
- STRING:   Q0AJB4
- GeneID:   4272116
- GenomeReviews:   CP000450_GR
- KEGG:   net:Neut_0273
- NMPDR:   fig|335283.3.peg.2146
- eggNOG:   COG0711
- HOGENOM:   HBG617328
- OMA:   ANATRQA
- PhylomeDB:   Q0AJB4
- ProtClustDB:   PRK05759
- BioCyc:   NEUT335283:NEUT_0273-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 17500; Mature: 17500

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x950bea8)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINFTLVSQAIAFSIFIWFTTKFVWPYLLRAIEERQQKIADGLAAGERGKKELELASQR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
SSEVLKEAKQRAGEIVIQAEKRASDIIEEAKKNARVEGEKILAGAKAEIQHEIFSARESL
HHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHH
RQQVAGLAVQGASKILRREVNAKAHADLLASIETELK
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MNINFTLVSQAIAFSIFIWFTTKFVWPYLLRAIEERQQKIADGLAAGERGKKELELASQR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
SSEVLKEAKQRAGEIVIQAEKRASDIIEEAKKNARVEGEKILAGAKAEIQHEIFSARESL
HHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHH
RQQVAGLAVQGASKILRREVNAKAHADLLASIETELK
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA