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The map label for this gene is birA [H]

Identifier: 114330259

GI number: 114330259

Start: 245269

End: 246258

Strand: Direct

Name: birA [H]

Synonym: Neut_0232

Alternate gene names: 114330259

Gene position: 245269-246258 (Clockwise)

Preceding gene: 114330258

Following gene: 114330260

Centisome position: 9.22

GC content: 47.17

Gene sequence:

>990_bases
ATGAATCCGTTTGCATTTACTATCCTGAGAATGCTGAGTGATGGAAACTATCATTCCGGCACAGCACTGGGCCAGGCACT
GAATGTTTCCCGCGCCAGCATATCCAATGCGTTGAATGATCTGGATTGCTACGGGTTGGTAATACACAGGATTCGTGGTC
GAGGGTATCGCTGGTTGAATCCAACGCAATGGCTGGACAGTAAACAAATACGCCACTATCTTGCTGAATATGCGGATTCC
ATACAAATAGAAATCGTAGAGGCTGTTGAATCTACTAATTCACTGCTGCTGCAGCGCGTGATTGATCAGGGCGCTTCTGC
TGGCAGATTAAAGCAAGTTCTGGTTACGGAGTTACAGACGCAAGGGCGCGGGCGACGCGGACGTACATGGGTATCGGGAC
TGGGAGACAGCCTGGTTTTCTCTGTTTTATGGCCATCGCAATGTGCAGTAAATACTCTTTCCGGGTTGAGTTTGGCAGTG
GGTGTGGCAATTGTTCGTGCACTGACATTATTTGGAATTCGTAACATCGCACTGAAATGGCCGAATGATGTGTTATCTGG
CTACAACAAGTTAGCAGGAGTGCTGATTGAGCTGCATGGGGATATGTTGAGTCCAGGTACCGTGATTATTGGTATCGGGC
TGAATCTTAGACTTTCTAACGTTACAAAATCTCAGATTGATCAAAAGGTAACCGATGTTGCCAGTGTTGCAGGACAAATG
CCGGACAGAAATCGGTTGTTGGCTATTTTGTTGAAAGAACTGGCCAAGATGCTTGATACATTTGAACAGCATGGTTTCGA
GCCTTTTGTGGAGGAATGGGAGCGTCATCATGCTTATCAGGATAAAGCTGTGCAGATTAGTTTTCCGGATGGTGCTGTCA
AAAATGGAATCGCAATCGGTATTGTGCCCGATGGTGCCTTACAGATCAATACCCCGACAGGTATCGTGCAATTGAGAAGT
GGAGAGGTTTCTCTGCGCGGGCTGATCTGA

Upstream 100 bases:

>100_bases
TTTTTCATTATGGTATATCTGATCGGGAAAACCACAACAATAAGATTGCTCGAAGTGAATAAATCAGAAGTGCTCGCGAG
ATATTGGCAGGAAATTTAAT

Downstream 100 bases:

>100_bases
TACGGATATCAGAGATTCCCTAATTGAATGAACGTATCCTCTTTTCTGCTGGCGATTGATTCCGGTAATACTGCTATCAA
ATGGGGGTTGCACACGGGTG

Product: biotin--acetyl-CoA-carboxylase ligase

Products: NA

Alternate protein names: Biotin operon repressor; Biotin--[acetyl-CoA-carboxylase] synthetase; Biotin--protein ligase [H]

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MNPFAFTILRMLSDGNYHSGTALGQALNVSRASISNALNDLDCYGLVIHRIRGRGYRWLNPTQWLDSKQIRHYLAEYADS
IQIEIVEAVESTNSLLLQRVIDQGASAGRLKQVLVTELQTQGRGRRGRTWVSGLGDSLVFSVLWPSQCAVNTLSGLSLAV
GVAIVRALTLFGIRNIALKWPNDVLSGYNKLAGVLIELHGDMLSPGTVIIGIGLNLRLSNVTKSQIDQKVTDVASVAGQM
PDRNRLLAILLKELAKMLDTFEQHGFEPFVEEWERHHAYQDKAVQISFPDGAVKNGIAIGIVPDGALQINTPTGIVQLRS
GEVSLRGLI

Sequences:

>Translated_329_residues
MNPFAFTILRMLSDGNYHSGTALGQALNVSRASISNALNDLDCYGLVIHRIRGRGYRWLNPTQWLDSKQIRHYLAEYADS
IQIEIVEAVESTNSLLLQRVIDQGASAGRLKQVLVTELQTQGRGRRGRTWVSGLGDSLVFSVLWPSQCAVNTLSGLSLAV
GVAIVRALTLFGIRNIALKWPNDVLSGYNKLAGVLIELHGDMLSPGTVIIGIGLNLRLSNVTKSQIDQKVTDVASVAGQM
PDRNRLLAILLKELAKMLDTFEQHGFEPFVEEWERHHAYQDKAVQISFPDGAVKNGIAIGIVPDGALQINTPTGIVQLRS
GEVSLRGLI
>Mature_329_residues
MNPFAFTILRMLSDGNYHSGTALGQALNVSRASISNALNDLDCYGLVIHRIRGRGYRWLNPTQWLDSKQIRHYLAEYADS
IQIEIVEAVESTNSLLLQRVIDQGASAGRLKQVLVTELQTQGRGRRGRTWVSGLGDSLVFSVLWPSQCAVNTLSGLSLAV
GVAIVRALTLFGIRNIALKWPNDVLSGYNKLAGVLIELHGDMLSPGTVIIGIGLNLRLSNVTKSQIDQKVTDVASVAGQM
PDRNRLLAILLKELAKMLDTFEQHGFEPFVEEWERHHAYQDKAVQISFPDGAVKNGIAIGIVPDGALQINTPTGIVQLRS
GEVSLRGLI

Specific function: BirA acts both as a biotin-operon repressor and as the enzyme that synthesizes the corepressor, acetyl-CoA:carbon-dioxide ligase. This protein also activates biotin to form biotinyl-5'- adenylate and transfers the biotin moiety to biotin-accepting protein

COG id: COG0340

COG function: function code H; Biotin-(acetyl-CoA carboxylase) ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the biotin--protein ligase family [H]

Homologues:

Organism=Escherichia coli, GI1790408, Length=327, Percent_Identity=33.6391437308869, Blast_Score=180, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004408
- InterPro:   IPR004409
- InterPro:   IPR003142
- InterPro:   IPR004143
- InterPro:   IPR013196
- InterPro:   IPR008988
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02237 BPL_C; PF03099 BPL_LipA_LipB; PF08279 HTH_11 [H]

EC number: =6.3.4.15 [H]

Molecular weight: Translated: 35986; Mature: 35986

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPFAFTILRMLSDGNYHSGTALGQALNVSRASISNALNDLDCYGLVIHRIRGRGYRWLN
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PTQWLDSKQIRHYLAEYADSIQIEIVEAVESTNSLLLQRVIDQGASAGRLKQVLVTELQT
HHHHCCHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
QGRGRRGRTWVSGLGDSLVFSVLWPSQCAVNTLSGLSLAVGVAIVRALTLFGIRNIALKW
CCCCCCCCHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
PNDVLSGYNKLAGVLIELHGDMLSPGTVIIGIGLNLRLSNVTKSQIDQKVTDVASVAGQM
CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHHHCC
PDRNRLLAILLKELAKMLDTFEQHGFEPFVEEWERHHAYQDKAVQISFPDGAVKNGIAIG
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHCCEEEE
IVPDGALQINTPTGIVQLRSGEVSLRGLI
EECCCCEEEECCCCEEEEECCCEEEECCC
>Mature Secondary Structure
MNPFAFTILRMLSDGNYHSGTALGQALNVSRASISNALNDLDCYGLVIHRIRGRGYRWLN
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PTQWLDSKQIRHYLAEYADSIQIEIVEAVESTNSLLLQRVIDQGASAGRLKQVLVTELQT
HHHHCCHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
QGRGRRGRTWVSGLGDSLVFSVLWPSQCAVNTLSGLSLAVGVAIVRALTLFGIRNIALKW
CCCCCCCCHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
PNDVLSGYNKLAGVLIELHGDMLSPGTVIIGIGLNLRLSNVTKSQIDQKVTDVASVAGQM
CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHHHCC
PDRNRLLAILLKELAKMLDTFEQHGFEPFVEEWERHHAYQDKAVQISFPDGAVKNGIAIG
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHCCEEEE
IVPDGALQINTPTGIVQLRSGEVSLRGLI
EECCCCEEEECCCCEEEEECCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3899863; 3536662; 8265357; 9278503; 1311302; 1328157; 1409631; 11353844 [H]