Click here to switch to the map view.

The map label for this gene is motB [H]

Identifier: 114330218

GI number: 114330218

Start: 189653

End: 190597

Strand: Direct

Name: motB [H]

Synonym: Neut_0189

Alternate gene names: 114330218

Gene position: 189653-190597 (Clockwise)

Preceding gene: 114330217

Following gene: 114330219

Centisome position: 7.13

GC content: 46.24

Gene sequence:

>945_bases
ATGGCTGAGGATTTTTCACAAAAACCCATCATTATCAAACGTATTAAGAAGGTGTCGGGGCAGCATCACGGTGGTGCTTG
GAAAATTGCCTATGCTGATTTCGTGACGGCTATGATGGCCTTTTTTTTGCTGATGTGGTTGTTGGGTTCAACTACGCAGG
GGGATAAGGAAGGTATTTCTGAATATTTCAAGATGCCTTTAAAAGTTGCGCTGCTTGGGGGAGATGGCAGCGGGGACAGC
ACCAGTGTCATTAAAGGAGGTGGTGATGATCTGAGCCGGCGAATCGGTCAGATGAGGCGATCCGATTTTGATGACTTGAA
GCAATCTCTTGATATGGATGCGCTGCAGACTCTCCAGGATCGTGTTGAACGGGAACAACTGGAAAAACTCAAAGCCAGAA
TAGAAGATGCAATCAACAGTAATCCGGTACTTAATAAATTTAAGAGCCAGCTGTTACTCGATATTACCTCGGAAGGTTTA
CGCATCCAGATTGTTGATGAAAAAAACCGTCCGATGTTTGCTATCGGAAAAGCAGAATTGCAGCCGTATACCAAAATGAT
TCTGCATGAAATCGGCAAGATGCTGAATGATGTCGGCAATAAAATCAGTCTTTCTGGCCACACTGACGCGACTCCCTATC
CCTCCGGTGAAAAAAGCTACAGTAACTGGGAATTATCGGCGGATCGTGCCAATGCTTCCCGGCGTGAGCTGATCGCGGGT
GGAATGAATCCGGAGAAAATGTTGCGAGTGGTCGGGCTGTCTTCCGCGGTGATGTTTGATAAAGAAGATTCATTCAGTCC
GTTTAACCGGCGGATCAGCATTATCGTCATGAATAAAAAAGCCGAGGATGCCATTACCCGTGAAAGCCTGGGTGAAGTAA
ACATCCATAGTGAAGAAGAAGTCAGTCCGCAGATTGTGGATGGAAACAATGCCGTATCCAACTGA

Upstream 100 bases:

>100_bases
CGAGCGGCCATCGTTCATCGAACTGGAAAAACACGTCAAACAGAGTAAAGCTAAATGATGTTGCTTCTCCAAGTTTTTCT
GTTGCTAAGTGAGGTCGTGA

Downstream 100 bases:

>100_bases
GACTGTTCATCAGTGTGCTGCTTCCGAATCACTGCTGAAAAAGATCTTTGTAGTGCTGCCAGGCAGTATTTTGCTTGTAT
GTCTGCTTGGGGTAATTCTG

Product: flagellar motor protein MotB

Products: NA

Alternate protein names: Chemotaxis protein MotB [H]

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MAEDFSQKPIIIKRIKKVSGQHHGGAWKIAYADFVTAMMAFFLLMWLLGSTTQGDKEGISEYFKMPLKVALLGGDGSGDS
TSVIKGGGDDLSRRIGQMRRSDFDDLKQSLDMDALQTLQDRVEREQLEKLKARIEDAINSNPVLNKFKSQLLLDITSEGL
RIQIVDEKNRPMFAIGKAELQPYTKMILHEIGKMLNDVGNKISLSGHTDATPYPSGEKSYSNWELSADRANASRRELIAG
GMNPEKMLRVVGLSSAVMFDKEDSFSPFNRRISIIVMNKKAEDAITRESLGEVNIHSEEEVSPQIVDGNNAVSN

Sequences:

>Translated_314_residues
MAEDFSQKPIIIKRIKKVSGQHHGGAWKIAYADFVTAMMAFFLLMWLLGSTTQGDKEGISEYFKMPLKVALLGGDGSGDS
TSVIKGGGDDLSRRIGQMRRSDFDDLKQSLDMDALQTLQDRVEREQLEKLKARIEDAINSNPVLNKFKSQLLLDITSEGL
RIQIVDEKNRPMFAIGKAELQPYTKMILHEIGKMLNDVGNKISLSGHTDATPYPSGEKSYSNWELSADRANASRRELIAG
GMNPEKMLRVVGLSSAVMFDKEDSFSPFNRRISIIVMNKKAEDAITRESLGEVNIHSEEEVSPQIVDGNNAVSN
>Mature_313_residues
AEDFSQKPIIIKRIKKVSGQHHGGAWKIAYADFVTAMMAFFLLMWLLGSTTQGDKEGISEYFKMPLKVALLGGDGSGDST
SVIKGGGDDLSRRIGQMRRSDFDDLKQSLDMDALQTLQDRVEREQLEKLKARIEDAINSNPVLNKFKSQLLLDITSEGLR
IQIVDEKNRPMFAIGKAELQPYTKMILHEIGKMLNDVGNKISLSGHTDATPYPSGEKSYSNWELSADRANASRRELIAGG
MNPEKMLRVVGLSSAVMFDKEDSFSPFNRRISIIVMNKKAEDAITRESLGEVNIHSEEEVSPQIVDGNNAVSN

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for the rotation of the flagellar motor. Might be a linker that fastens the torque- generating machinery to the cell wall [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell inner membrane; Single- pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=304, Percent_Identity=45.3947368421053, Blast_Score=267, Evalue=8e-73,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 34899; Mature: 34768

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEDFSQKPIIIKRIKKVSGQHHGGAWKIAYADFVTAMMAFFLLMWLLGSTTQGDKEGIS
CCCCCCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
EYFKMPLKVALLGGDGSGDSTSVIKGGGDDLSRRIGQMRRSDFDDLKQSLDMDALQTLQD
HHHCCCEEEEEECCCCCCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHH
RVEREQLEKLKARIEDAINSNPVLNKFKSQLLLDITSEGLRIQIVDEKNRPMFAIGKAEL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECHHHH
QPYTKMILHEIGKMLNDVGNKISLSGHTDATPYPSGEKSYSNWELSADRANASRRELIAG
HHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCEEECHHCCCHHHHHHHC
GMNPEKMLRVVGLSSAVMFDKEDSFSPFNRRISIIVMNKKAEDAITRESLGEVNIHSEEE
CCCHHHHHHHHCCCHHEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCC
VSPQIVDGNNAVSN
CCCEEECCCCCCCC
>Mature Secondary Structure 
AEDFSQKPIIIKRIKKVSGQHHGGAWKIAYADFVTAMMAFFLLMWLLGSTTQGDKEGIS
CCCCCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
EYFKMPLKVALLGGDGSGDSTSVIKGGGDDLSRRIGQMRRSDFDDLKQSLDMDALQTLQD
HHHCCCEEEEEECCCCCCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHH
RVEREQLEKLKARIEDAINSNPVLNKFKSQLLLDITSEGLRIQIVDEKNRPMFAIGKAEL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECHHHH
QPYTKMILHEIGKMLNDVGNKISLSGHTDATPYPSGEKSYSNWELSADRANASRRELIAG
HHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCEEECHHCCCHHHHHHHC
GMNPEKMLRVVGLSSAVMFDKEDSFSPFNRRISIIVMNKKAEDAITRESLGEVNIHSEEE
CCCHHHHHHHHCCCHHEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCC
VSPQIVDGNNAVSN
CCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9139919; 11677609; 10586519 [H]