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The map label for this gene is yfdH [C]

Identifier: 114330074

GI number: 114330074

Start: 42775

End: 43797

Strand: Reverse

Name: yfdH [C]

Synonym: Neut_0041

Alternate gene names: 114330074

Gene position: 43797-42775 (Counterclockwise)

Preceding gene: 114330076

Following gene: 114330073

Centisome position: 1.65

GC content: 53.86

Gene sequence:

>1023_bases
ATGAACGCGTTGGTCGAGAAAATGGGCCCTGACTTGGATAAGGCTGACATGACGGAGTTGTCGGTGGTGATTCCGTTGTA
CAACGAGCAGGAGGTGATCACGGTTATGTACGAGCGGCTGACCGCAGTGCTTGCCGAACTGCAGGTTGCTTATGAGCTGG
TATTAGTGGATGATGGTAGTCGCGACGGTACGCCCGCTATGATGAGGCGGCTGACCAAAGATGATTCTGCTGTCACAGCT
GTATTCCTAAGCAGAAACTTTGGAAAGGAAGCGGCTCTGACAGCAGGTCTAGCGCATGCCGTCGGCGCTGCGGTCGTCAT
CATGGATGCCGATTTGCAGGATCCTCCAGAGTTAATCCCCCAAATGATGCAAGCCTGGAACGAGGGTGCGGACGTCGTTT
GTATGCGCCGCAGCTCAAGAGCAGGCGAAACCTGGTTCAAGCGCCGCAGCGCACATCACTTCTACCGAGTGCTCAATGCT
GTCAGCGACGTGGAGATCCCACCCGATACCGGTGATTTTCGCTTGTTAAGCCGCAAGGCTATCTATGCCCTGCAACAGTT
GAACGAGCGGAATCGCTACATGAAAGGCTTGTTTGCCTGGATAGGCTTGCCCACGACAGTCATTGAGTATGATCGGATGC
CGCGTGTGGCGGGCACTACCAAATGGAACTACGCCAGCCTGTTTAACCTCGCCTTTCAGGGCATTACTTCTTTCTCCACC
GCTCCGCTGCGCCTTGTCGTCGCTGGAGGCCTGCTGACGGCATTTCTTGGCATTATTTTCGCCCTGTGGATTGTTGCCAA
GACGCTTGTCTTCGGCGACCCAGTGCAAGGTTACCCTTCCCTCATTGCCATGATTACATTTCTTGGTGGTGCCCAATTGC
TGTCAATTGGGCTGCTTGGCGAGTACATCGGCAAGACTTATTACGAAACTAAGCAACGTCCCGTGTATTTGGTGCATGAG
GTGCTGAAGCGAGGAAGAGTAGTGGACCAAATGACTGCCAGTTCCGAGCGCTCACATGCATAA

Upstream 100 bases:

>100_bases
AGAATTAAAACTATATGGCGAGAACCATGAACGGCTCGTTTCCTACACCAACGCCGCAATTGCGGTGATGAGTTTTATTC
GTTACAAAGGATTGTGTTCC

Downstream 100 bases:

>100_bases
AATAGTCTCATATAGACCACTTGAACGGTGACGCATTGCGACGAGGCCTAAATATGTCAAAAATGTGATGGTAGCGACCA
TCCCATTGTTAGTGGCAGTT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MNALVEKMGPDLDKADMTELSVVIPLYNEQEVITVMYERLTAVLAELQVAYELVLVDDGSRDGTPAMMRRLTKDDSAVTA
VFLSRNFGKEAALTAGLAHAVGAAVVIMDADLQDPPELIPQMMQAWNEGADVVCMRRSSRAGETWFKRRSAHHFYRVLNA
VSDVEIPPDTGDFRLLSRKAIYALQQLNERNRYMKGLFAWIGLPTTVIEYDRMPRVAGTTKWNYASLFNLAFQGITSFST
APLRLVVAGGLLTAFLGIIFALWIVAKTLVFGDPVQGYPSLIAMITFLGGAQLLSIGLLGEYIGKTYYETKQRPVYLVHE
VLKRGRVVDQMTASSERSHA

Sequences:

>Translated_340_residues
MNALVEKMGPDLDKADMTELSVVIPLYNEQEVITVMYERLTAVLAELQVAYELVLVDDGSRDGTPAMMRRLTKDDSAVTA
VFLSRNFGKEAALTAGLAHAVGAAVVIMDADLQDPPELIPQMMQAWNEGADVVCMRRSSRAGETWFKRRSAHHFYRVLNA
VSDVEIPPDTGDFRLLSRKAIYALQQLNERNRYMKGLFAWIGLPTTVIEYDRMPRVAGTTKWNYASLFNLAFQGITSFST
APLRLVVAGGLLTAFLGIIFALWIVAKTLVFGDPVQGYPSLIAMITFLGGAQLLSIGLLGEYIGKTYYETKQRPVYLVHE
VLKRGRVVDQMTASSERSHA
>Mature_340_residues
MNALVEKMGPDLDKADMTELSVVIPLYNEQEVITVMYERLTAVLAELQVAYELVLVDDGSRDGTPAMMRRLTKDDSAVTA
VFLSRNFGKEAALTAGLAHAVGAAVVIMDADLQDPPELIPQMMQAWNEGADVVCMRRSSRAGETWFKRRSAHHFYRVLNA
VSDVEIPPDTGDFRLLSRKAIYALQQLNERNRYMKGLFAWIGLPTTVIEYDRMPRVAGTTKWNYASLFNLAFQGITSFST
APLRLVVAGGLLTAFLGIIFALWIVAKTLVFGDPVQGYPSLIAMITFLGGAQLLSIGLLGEYIGKTYYETKQRPVYLVHE
VLKRGRVVDQMTASSERSHA

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=174, Percent_Identity=29.3103448275862, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI1788692, Length=305, Percent_Identity=44.2622950819672, Blast_Score=293, Evalue=1e-80,
Organism=Escherichia coli, GI1788588, Length=308, Percent_Identity=31.8181818181818, Blast_Score=177, Evalue=8e-46,
Organism=Saccharomyces cerevisiae, GI6325441, Length=213, Percent_Identity=30.0469483568075, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24585265, Length=173, Percent_Identity=30.0578034682081, Blast_Score=75, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 37732; Mature: 37732

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALVEKMGPDLDKADMTELSVVIPLYNEQEVITVMYERLTAVLAELQVAYELVLVDDGS
CCCHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
RDGTPAMMRRLTKDDSAVTAVFLSRNFGKEAALTAGLAHAVGAAVVIMDADLQDPPELIP
CCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHH
QMMQAWNEGADVVCMRRSSRAGETWFKRRSAHHFYRVLNAVSDVEIPPDTGDFRLLSRKA
HHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
IYALQQLNERNRYMKGLFAWIGLPTTVIEYDRMPRVAGTTKWNYASLFNLAFQGITSFST
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
APLRLVVAGGLLTAFLGIIFALWIVAKTLVFGDPVQGYPSLIAMITFLGGAQLLSIGLLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
EYIGKTYYETKQRPVYLVHEVLKRGRVVDQMTASSERSHA
HHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MNALVEKMGPDLDKADMTELSVVIPLYNEQEVITVMYERLTAVLAELQVAYELVLVDDGS
CCCHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
RDGTPAMMRRLTKDDSAVTAVFLSRNFGKEAALTAGLAHAVGAAVVIMDADLQDPPELIP
CCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHH
QMMQAWNEGADVVCMRRSSRAGETWFKRRSAHHFYRVLNAVSDVEIPPDTGDFRLLSRKA
HHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
IYALQQLNERNRYMKGLFAWIGLPTTVIEYDRMPRVAGTTKWNYASLFNLAFQGITSFST
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
APLRLVVAGGLLTAFLGIIFALWIVAKTLVFGDPVQGYPSLIAMITFLGGAQLLSIGLLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
EYIGKTYYETKQRPVYLVHEVLKRGRVVDQMTASSERSHA
HHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]