| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113970045
Identifier: 113970045
GI number: 113970045
Start: 2018034
End: 2018801
Strand: Direct
Name: 113970045
Synonym: Shewmr4_1706
Alternate gene names: NA
Gene position: 2018034-2018801 (Clockwise)
Preceding gene: 113970044
Following gene: 113970046
Centisome position: 42.88
GC content: 45.31
Gene sequence:
>768_bases ATGGAGCAACTACCGCATTTGACTCAAATTGGCTTCAAGTTTGGTAAAAATGGGGCGCATGCTGCCCGAAGCATGATGAT CCAAGAGCTGACACAACTGTTGATGTCACTGCCCGAGCAGGCATCGTTGGATGAATACCGCGCGAATATTATCGATGCCA ATCTTCTGCATAAATCGAGTGAGAACGCCCGTAAGCTTACTTTTCGACATATGGTCGATCTTTATGGTTTGTCGCCACAA GTTCCGCTTTTTAAAATATTTCGCCAGTTGTGGGATTTATCAGAGGAGTCTCAGCCGCTATTGGCATTGCAGTTAGCCGT TGCCAGAGATCCGCTATTAAGAGGTTCCGCCGAGGTCATTTTATCTCTAGAACCTGGAGAGATGCTCCATAGAGAAACCA TGGAAGCGCACCTTGCCAAAGATGACCCGGACAGATTTAGTCCCGCTTCGTTAAAGTCCTTCTCGCAAAATTTAAACGGT ACCTGGACTCAGGCGGGTTATCTGACTGGCAAGGCTAAAAAATACCGTAGCGAGCCTAAAGTCACCTATGTAAACCTGGT ATTTGCCTTGGTTTTGGCCCATTACCACGAGCTTAGTGGTATAAGGCTTTTCAACAGTTTCTGGTGTAAGTTGCTCTTAA AGAGTCACGCAGATTTATACGAATTAGCTCATCGTGCGACGCTTAGAGGATTGATCCACTTTAAACAGGCAAGCGAAGTG ATAGAAGTGTCATTTGCACCATTAAAACTTCCTGAATTCAAGGATTGA
Upstream 100 bases:
>100_bases GTAATTTGTACGAATATTTGTGAATAAGAGCAACCTGTTACAACAAACTGAGATACCATATGTCATCGTTTCTGTGTTCG CTGAAAAAGAGTAGTAATTA
Downstream 100 bases:
>100_bases ATCCATGTCCGACAGACTTACCAAATTACTTAACAGCTTTAGCAACCATATCAGTGTGCCCTGGAGTAACACTATCTCTG CCGAGGAAAAAGCCATTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MEQLPHLTQIGFKFGKNGAHAARSMMIQELTQLLMSLPEQASLDEYRANIIDANLLHKSSENARKLTFRHMVDLYGLSPQ VPLFKIFRQLWDLSEESQPLLALQLAVARDPLLRGSAEVILSLEPGEMLHRETMEAHLAKDDPDRFSPASLKSFSQNLNG TWTQAGYLTGKAKKYRSEPKVTYVNLVFALVLAHYHELSGIRLFNSFWCKLLLKSHADLYELAHRATLRGLIHFKQASEV IEVSFAPLKLPEFKD
Sequences:
>Translated_255_residues MEQLPHLTQIGFKFGKNGAHAARSMMIQELTQLLMSLPEQASLDEYRANIIDANLLHKSSENARKLTFRHMVDLYGLSPQ VPLFKIFRQLWDLSEESQPLLALQLAVARDPLLRGSAEVILSLEPGEMLHRETMEAHLAKDDPDRFSPASLKSFSQNLNG TWTQAGYLTGKAKKYRSEPKVTYVNLVFALVLAHYHELSGIRLFNSFWCKLLLKSHADLYELAHRATLRGLIHFKQASEV IEVSFAPLKLPEFKD >Mature_255_residues MEQLPHLTQIGFKFGKNGAHAARSMMIQELTQLLMSLPEQASLDEYRANIIDANLLHKSSENARKLTFRHMVDLYGLSPQ VPLFKIFRQLWDLSEESQPLLALQLAVARDPLLRGSAEVILSLEPGEMLHRETMEAHLAKDDPDRFSPASLKSFSQNLNG TWTQAGYLTGKAKKYRSEPKVTYVNLVFALVLAHYHELSGIRLFNSFWCKLLLKSHADLYELAHRATLRGLIHFKQASEV IEVSFAPLKLPEFKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29011; Mature: 29011
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQLPHLTQIGFKFGKNGAHAARSMMIQELTQLLMSLPEQASLDEYRANIIDANLLHKSS CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC ENARKLTFRHMVDLYGLSPQVPLFKIFRQLWDLSEESQPLLALQLAVARDPLLRGSAEVI CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCEEE LSLEPGEMLHRETMEAHLAKDDPDRFSPASLKSFSQNLNGTWTQAGYLTGKAKKYRSEPK EEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEECCEECCHHHHHCCCCC VTYVNLVFALVLAHYHELSGIRLFNSFWCKLLLKSHADLYELAHRATLRGLIHFKQASEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH IEVSFAPLKLPEFKD HHHCCCCCCCCCCCC >Mature Secondary Structure MEQLPHLTQIGFKFGKNGAHAARSMMIQELTQLLMSLPEQASLDEYRANIIDANLLHKSS CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC ENARKLTFRHMVDLYGLSPQVPLFKIFRQLWDLSEESQPLLALQLAVARDPLLRGSAEVI CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCEEE LSLEPGEMLHRETMEAHLAKDDPDRFSPASLKSFSQNLNGTWTQAGYLTGKAKKYRSEPK EEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEECCEECCHHHHHCCCCC VTYVNLVFALVLAHYHELSGIRLFNSFWCKLLLKSHADLYELAHRATLRGLIHFKQASEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH IEVSFAPLKLPEFKD HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA