Click here to switch to the map view.

The map label for this gene is 113970044

Identifier: 113970044

GI number: 113970044

Start: 2017257

End: 2017937

Strand: Direct

Name: 113970044

Synonym: Shewmr4_1705

Alternate gene names: NA

Gene position: 2017257-2017937 (Clockwise)

Preceding gene: 113970043

Following gene: 113970045

Centisome position: 42.86

GC content: 41.85

Gene sequence:

>681_bases
ATGAAAAAAAAGAATGCAATTTTGATTTTAGAAGCTCCATGGGAGTTGTCTGAGTCAGACCAAAATACAGTCAGTGTTTT
ACCCTTTTTTCAAGGGCTGGAGCGATTGAGAGGGAATTTTGATCTGTTTCACTCTCACTTCTACGAAGCTAAAAGTTTTG
AAATGGCGCTTGATAACCTCACAAGGGTACAATACGACCGCTGTTACGTGTATATAGCATGTCACGGAGCAGGTAAGCGC
CTACATAACATGAATATGGCTAACGCGTTAAAGATTATCCAAACTAAAGCGAAACAAAATAATATCTTAGGTGTGGTCAT
CGGTTCGTGTTTGGTGGGCAATAATACTGACATCATGGGGGAATCAATGAAAAATTCTCCCATAGTTTGGAAGTTTGGTT
ACCGATGTGAAGTTAACTGGTTAGATGGCACCTTGATGGATCTCGAAGTCTTTGATGCCTTGTTAAAGGCGCGAGAGCCT
GATTTCTCAGATGAAAACGCGCTACTGCGGCGTTTCCAATCCGCATTTAGACACTATGCCCCTCATGCAATTATTGGTAA
TCACCCTAATGGTGAAGGTTGCTCAATTGCTGATGGCATTTCTTTGGTGATCCAAGCCAGAGGGCAAGGTCATGTACCAA
TGGATTACAGTGAATGCCTATTTGATGATGATTGCGAGTAA

Upstream 100 bases:

>100_bases
TATTCAATGCACTGATTTTATTGTTAAATGTTTTTACGGTCAGCCATACAGTGGATTGTGGCCCATTTAGGGCGAATAGA
CGTTAGGAAATCAAAGGGAA

Downstream 100 bases:

>100_bases
TTTGTACGAATATTTGTGAATAAGAGCAACCTGTTACAACAAACTGAGATACCATATGTCATCGTTTCTGTGTTCGCTGA
AAAAGAGTAGTAATTAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MKKKNAILILEAPWELSESDQNTVSVLPFFQGLERLRGNFDLFHSHFYEAKSFEMALDNLTRVQYDRCYVYIACHGAGKR
LHNMNMANALKIIQTKAKQNNILGVVIGSCLVGNNTDIMGESMKNSPIVWKFGYRCEVNWLDGTLMDLEVFDALLKAREP
DFSDENALLRRFQSAFRHYAPHAIIGNHPNGEGCSIADGISLVIQARGQGHVPMDYSECLFDDDCE

Sequences:

>Translated_226_residues
MKKKNAILILEAPWELSESDQNTVSVLPFFQGLERLRGNFDLFHSHFYEAKSFEMALDNLTRVQYDRCYVYIACHGAGKR
LHNMNMANALKIIQTKAKQNNILGVVIGSCLVGNNTDIMGESMKNSPIVWKFGYRCEVNWLDGTLMDLEVFDALLKAREP
DFSDENALLRRFQSAFRHYAPHAIIGNHPNGEGCSIADGISLVIQARGQGHVPMDYSECLFDDDCE
>Mature_226_residues
MKKKNAILILEAPWELSESDQNTVSVLPFFQGLERLRGNFDLFHSHFYEAKSFEMALDNLTRVQYDRCYVYIACHGAGKR
LHNMNMANALKIIQTKAKQNNILGVVIGSCLVGNNTDIMGESMKNSPIVWKFGYRCEVNWLDGTLMDLEVFDALLKAREP
DFSDENALLRRFQSAFRHYAPHAIIGNHPNGEGCSIADGISLVIQARGQGHVPMDYSECLFDDDCE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25568; Mature: 25568

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKNAILILEAPWELSESDQNTVSVLPFFQGLERLRGNFDLFHSHFYEAKSFEMALDNL
CCCCCEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TRVQYDRCYVYIACHGAGKRLHNMNMANALKIIQTKAKQNNILGVVIGSCLVGNNTDIMG
HHEEECEEEEEEEEECCCCHHHCCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCC
ESMKNSPIVWKFGYRCEVNWLDGTLMDLEVFDALLKAREPDFSDENALLRRFQSAFRHYA
CCCCCCCEEEEECCEEEEEECCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
PHAIIGNHPNGEGCSIADGISLVIQARGQGHVPMDYSECLFDDDCE
CCEEECCCCCCCCCCHHCCEEEEEEECCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MKKKNAILILEAPWELSESDQNTVSVLPFFQGLERLRGNFDLFHSHFYEAKSFEMALDNL
CCCCCEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TRVQYDRCYVYIACHGAGKRLHNMNMANALKIIQTKAKQNNILGVVIGSCLVGNNTDIMG
HHEEECEEEEEEEEECCCCHHHCCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCC
ESMKNSPIVWKFGYRCEVNWLDGTLMDLEVFDALLKAREPDFSDENALLRRFQSAFRHYA
CCCCCCCEEEEECCEEEEEECCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
PHAIIGNHPNGEGCSIADGISLVIQARGQGHVPMDYSECLFDDDCE
CCEEECCCCCCCCCCHHCCEEEEEEECCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA