| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is pgsA [H]
Identifier: 113969891
GI number: 113969891
Start: 1829868
End: 1830416
Strand: Direct
Name: pgsA [H]
Synonym: Shewmr4_1549
Alternate gene names: 113969891
Gene position: 1829868-1830416 (Clockwise)
Preceding gene: 113969890
Following gene: 113969898
Centisome position: 38.88
GC content: 47.36
Gene sequence:
>549_bases ATGCCGTTTAACTTACCTATAGCATTAACCCTTTTCAGGCTTTTTTTACTGCCCATCTTCGTGGTGCTCTTTTATCTGCC GTACAGTTGGACTCCCTTCGTTGCTGCTTTTGTGTTTTGGCTCGCCGCTATTACCGATGCCTTGGATGGCTATGCCGCCC GTAAGCTCAAGCAACTCACGCGTTTTGGTGCCTTTCTTGATCCGGTTGCCGATAAACTGATGGTGATCACCGCGCTCGTG TTATTAGTTGATCAATATGCCGATATTTGGTTAACGTTGCCGGCACTGTTTATGATTGGTCGTGAAATTGTAATTTCAGC GCTGCGTGAATGGATGGCTGAATTAGGTAAGCGCGGGACGGTTGCGGTTTCTTGGATCGGCAAATATAAAACGGCGGCGC AGATGGTGGCGATTATTGGCCTGATCTGGCAATACAACCCACTAATGATCCAAGCCGCATTTGTGCTGTTATATATCGCT GCCGTGTTAACCTTCTGGTCAATGATGAGCTACATTTTAGCCGCCTGGAAAGATTTAACGGCCGAATAG
Upstream 100 bases:
>100_bases CTGGTATTAGCATAGAAATGGCACAAACCATTCATGATGCATTGCGAGGGTGATAAATTTAAGGCAAGATTGGCGCTGCT TTTGACTAACTGGTTCGATC
Downstream 100 bases:
>100_bases CGCAATAAAAGATCAAAGAGATTATTTAGTGCGCAAGCAGTAAGTTATCGATAAAACAGCGGTTGACACTGCATGGTAAA TAGGTAGAATGCCTCCCCGT
Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MPFNLPIALTLFRLFLLPIFVVLFYLPYSWTPFVAAFVFWLAAITDALDGYAARKLKQLTRFGAFLDPVADKLMVITALV LLVDQYADIWLTLPALFMIGREIVISALREWMAELGKRGTVAVSWIGKYKTAAQMVAIIGLIWQYNPLMIQAAFVLLYIA AVLTFWSMMSYILAAWKDLTAE
Sequences:
>Translated_182_residues MPFNLPIALTLFRLFLLPIFVVLFYLPYSWTPFVAAFVFWLAAITDALDGYAARKLKQLTRFGAFLDPVADKLMVITALV LLVDQYADIWLTLPALFMIGREIVISALREWMAELGKRGTVAVSWIGKYKTAAQMVAIIGLIWQYNPLMIQAAFVLLYIA AVLTFWSMMSYILAAWKDLTAE >Mature_181_residues PFNLPIALTLFRLFLLPIFVVLFYLPYSWTPFVAAFVFWLAAITDALDGYAARKLKQLTRFGAFLDPVADKLMVITALVL LVDQYADIWLTLPALFMIGREIVISALREWMAELGKRGTVAVSWIGKYKTAAQMVAIIGLIWQYNPLMIQAAFVLLYIAA VLTFWSMMSYILAAWKDLTAE
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=179, Percent_Identity=59.7765363128492, Blast_Score=213, Evalue=7e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 20639; Mature: 20508
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS00024 HEMOPEXIN ; PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFNLPIALTLFRLFLLPIFVVLFYLPYSWTPFVAAFVFWLAAITDALDGYAARKLKQLT CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFGAFLDPVADKLMVITALVLLVDQYADIWLTLPALFMIGREIVISALREWMAELGKRGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VAVSWIGKYKTAAQMVAIIGLIWQYNPLMIQAAFVLLYIAAVLTFWSMMSYILAAWKDLT EEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AE CC >Mature Secondary Structure PFNLPIALTLFRLFLLPIFVVLFYLPYSWTPFVAAFVFWLAAITDALDGYAARKLKQLT CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFGAFLDPVADKLMVITALVLLVDQYADIWLTLPALFMIGREIVISALREWMAELGKRGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VAVSWIGKYKTAAQMVAIIGLIWQYNPLMIQAAFVLLYIAAVLTFWSMMSYILAAWKDLT EEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA