| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113969877
Identifier: 113969877
GI number: 113969877
Start: 1812253
End: 1812681
Strand: Direct
Name: 113969877
Synonym: Shewmr4_1535
Alternate gene names: NA
Gene position: 1812253-1812681 (Clockwise)
Preceding gene: 113969876
Following gene: 113969882
Centisome position: 38.51
GC content: 49.88
Gene sequence:
>429_bases ATGAATGCAGACACCTTGGCGTACCTCAATCAGCATCAATTAACCTCAGTGATGAGCCTCACTAAATGGCGTCAGCTTGA GCTGGCACTCCATGAAAAGCCAGAGTTTATGCCCCATGTGCGTTATAAGTTGCTGGAAGATGAAGGGCCAAACCTAGGTT TTACGCCAGTGTGGTGGGAGGAGTTACTCGCAATTTGCGAGCGGATTGAATGGCTTGAGGTTGATCCATTCAAAAGAGAA CACCGCGGCAGATTACTGCCGGAAAAGACCACGGATTTTACTGCCTATATCGAGGCGCAACTGCACAAGTATCGGCTCCC CTACAGTAAAGAAGCACAAGGGCTCAGGATTTGGGGCTATCTTCGCCCCGATGCGGCGATGCCGGTATTTTGTATTGCAC CTGATGGCGAGACCATAAAGGAAGCGTAA
Upstream 100 bases:
>100_bases CGTGCTCTAAATTCAAACTAAGTCGATTTAAGTATCTATCCGCTTGCGCTAAGATGAAGCCACTTAAGGATTTTTACTCA CAGGGAGCAGGCGCATCACA
Downstream 100 bases:
>100_bases GCAAATTCAGACGGCAGATAAAAAGAGGGCGCTAATTGATTAGCGCCCCGATTAGGATTAAAGCACTATATAAAGCGGCC AGCCGAGTAGACCGACGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MNADTLAYLNQHQLTSVMSLTKWRQLELALHEKPEFMPHVRYKLLEDEGPNLGFTPVWWEELLAICERIEWLEVDPFKRE HRGRLLPEKTTDFTAYIEAQLHKYRLPYSKEAQGLRIWGYLRPDAAMPVFCIAPDGETIKEA
Sequences:
>Translated_142_residues MNADTLAYLNQHQLTSVMSLTKWRQLELALHEKPEFMPHVRYKLLEDEGPNLGFTPVWWEELLAICERIEWLEVDPFKRE HRGRLLPEKTTDFTAYIEAQLHKYRLPYSKEAQGLRIWGYLRPDAAMPVFCIAPDGETIKEA >Mature_142_residues MNADTLAYLNQHQLTSVMSLTKWRQLELALHEKPEFMPHVRYKLLEDEGPNLGFTPVWWEELLAICERIEWLEVDPFKRE HRGRLLPEKTTDFTAYIEAQLHKYRLPYSKEAQGLRIWGYLRPDAAMPVFCIAPDGETIKEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16741; Mature: 16741
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNADTLAYLNQHQLTSVMSLTKWRQLELALHEKPEFMPHVRYKLLEDEGPNLGFTPVWWE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHH ELLAICERIEWLEVDPFKREHRGRLLPEKTTDFTAYIEAQLHKYRLPYSKEAQGLRIWGY HHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEE LRPDAAMPVFCIAPDGETIKEA ECCCCCCCEEEECCCCCCCCCC >Mature Secondary Structure MNADTLAYLNQHQLTSVMSLTKWRQLELALHEKPEFMPHVRYKLLEDEGPNLGFTPVWWE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHH ELLAICERIEWLEVDPFKREHRGRLLPEKTTDFTAYIEAQLHKYRLPYSKEAQGLRIWGY HHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEE LRPDAAMPVFCIAPDGETIKEA ECCCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA