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The map label for this gene is 113969858

Identifier: 113969858

GI number: 113969858

Start: 1784102

End: 1784788

Strand: Direct

Name: 113969858

Synonym: Shewmr4_1516

Alternate gene names: NA

Gene position: 1784102-1784788 (Clockwise)

Preceding gene: 113969857

Following gene: 113969860

Centisome position: 37.91

GC content: 48.18

Gene sequence:

>687_bases
ATGGGACCATGGTGGGTTAACGCTAAGCTGAGGTGGCGAGCACTGCGCTGTCAGCATGAGTTATTTAAGGATTACTATCA
ATCCTTATTGCCACTCTTAGATTTGCCCATCAGTCGCGCGCCCTTGATGGCGATGGATTTGGAGATGACGGGCTTAGATC
CTCTAAATGACCAAATTTTAAGTATTGGGCTGGTCCCGATTGAAAATGGCACTATTCCACTTGGGAGCGCGCAGCAAAAA
TTAGTGCAAATCCAGGGCAGTGTCGGACAGAGTGCGACGATACATGGCATTCTCGATAATCATTTAACTGAGGCTGTGAG
TATTGAGGAGGCGATGGCATGGTTTGTGAGCCAAACCCGTGGGCACATCTTGGTTGCGCACCACTCTCCACTCGATTGCC
GTTTTTTACAACAAGATATTTTGTCTATTTATCATCAAGCTATCGTTATACCTGCAATTGATACCCTATTGCTTGAGAAA
CATCGGTTGTTACGCGAACACTCAGTGCTTAAAGAGGGGAGTCTAAGATTGGGAGCCTGTCGTGAGCGATATGGTTTGCC
TATCTATGGCGCCCATAGCGCACTGACAGATGCCTTAGCCTGTGGCGAACTGTTATTAGCGCAGGTGGCTAGCATGGGCG
GCGCCGAGGAGTTAAAAGTGGGGGAATTATTGGCTTACTCGAGCTAA

Upstream 100 bases:

>100_bases
GACATTTATCTTCTTTGGTACGGCATCAACTACGGGATGCCTTTAAGGTGGTCCATGATGCCCAGTCGGGCATGAAGATG
AAATTTATGCGGAGCTTTTA

Downstream 100 bases:

>100_bases
GACGGGTATTAAAGACATCAAAGGGTTCGCCAAAATCGATAGCGAGATTTGAGTGACGTACGCCACTTTGCTGCAATAGT
GACTTCTTCATTCAACAGAC

Product: exonuclease, RNase T and DNA polymerase III

Products: NA

Alternate protein names: Exonuclease RNAse T And DNA Polymerase III; DNA Polymerase III Epsilon Subunit; Exonuclease; DNA Polymerase Exonuclease Activity; DNA Polymerase III Subunit; DNA Polymerase III; Exonuclease Superfamily; DNA Polymerase; Exonuclase; DNA Polymerase III Epsilon-Subunit Paralog

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MGPWWVNAKLRWRALRCQHELFKDYYQSLLPLLDLPISRAPLMAMDLEMTGLDPLNDQILSIGLVPIENGTIPLGSAQQK
LVQIQGSVGQSATIHGILDNHLTEAVSIEEAMAWFVSQTRGHILVAHHSPLDCRFLQQDILSIYHQAIVIPAIDTLLLEK
HRLLREHSVLKEGSLRLGACRERYGLPIYGAHSALTDALACGELLLAQVASMGGAEELKVGELLAYSS

Sequences:

>Translated_228_residues
MGPWWVNAKLRWRALRCQHELFKDYYQSLLPLLDLPISRAPLMAMDLEMTGLDPLNDQILSIGLVPIENGTIPLGSAQQK
LVQIQGSVGQSATIHGILDNHLTEAVSIEEAMAWFVSQTRGHILVAHHSPLDCRFLQQDILSIYHQAIVIPAIDTLLLEK
HRLLREHSVLKEGSLRLGACRERYGLPIYGAHSALTDALACGELLLAQVASMGGAEELKVGELLAYSS
>Mature_227_residues
GPWWVNAKLRWRALRCQHELFKDYYQSLLPLLDLPISRAPLMAMDLEMTGLDPLNDQILSIGLVPIENGTIPLGSAQQKL
VQIQGSVGQSATIHGILDNHLTEAVSIEEAMAWFVSQTRGHILVAHHSPLDCRFLQQDILSIYHQAIVIPAIDTLLLEKH
RLLREHSVLKEGSLRLGACRERYGLPIYGAHSALTDALACGELLLAQVASMGGAEELKVGELLAYSS

Specific function: Unknown

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25172; Mature: 25040

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPWWVNAKLRWRALRCQHELFKDYYQSLLPLLDLPISRAPLMAMDLEMTGLDPLNDQIL
CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEE
SIGLVPIENGTIPLGSAQQKLVQIQGSVGQSATIHGILDNHLTEAVSIEEAMAWFVSQTR
EEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCC
GHILVAHHSPLDCRFLQQDILSIYHQAIVIPAIDTLLLEKHRLLREHSVLKEGSLRLGAC
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
RERYGLPIYGAHSALTDALACGELLLAQVASMGGAEELKVGELLAYSS
HHHCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
GPWWVNAKLRWRALRCQHELFKDYYQSLLPLLDLPISRAPLMAMDLEMTGLDPLNDQIL
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEE
SIGLVPIENGTIPLGSAQQKLVQIQGSVGQSATIHGILDNHLTEAVSIEEAMAWFVSQTR
EEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCC
GHILVAHHSPLDCRFLQQDILSIYHQAIVIPAIDTLLLEKHRLLREHSVLKEGSLRLGAC
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
RERYGLPIYGAHSALTDALACGELLLAQVASMGGAEELKVGELLAYSS
HHHCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA