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The map label for this gene is 113969818

Identifier: 113969818

GI number: 113969818

Start: 1730355

End: 1731086

Strand: Direct

Name: 113969818

Synonym: Shewmr4_1476

Alternate gene names: NA

Gene position: 1730355-1731086 (Clockwise)

Preceding gene: 113969817

Following gene: 113969821

Centisome position: 36.77

GC content: 48.22

Gene sequence:

>732_bases
ATGACGAAATCCTTAATCAAGATACTGAGCGTTTTACTTTTATGTTCAACTGCTAACGCCTTTGCCGATGAGTTTGCCGA
TAATCTGGGGCTAAGCTTGTTGCCTGTCGAACCATCAACTCAGGTAAACGTTTCCTCATACCACACCAAACCACCGCTGG
TGATTTTTTTGAGTGGCGATGGCGGTTGGGCGACCCTTGATAAAGCCGTTGGGGGCATTTTACAGCAGCAGGGCTGGCCT
GTGGTCGGCTGGAGCTCGCTGAAATACTATTGGAAACAAAAAGATCCCAAAGATGTCACCCAAGATACCTTAGCCATAAT
CGACAAGTACCAAGCGGAATTTGGCACGCAAAAAGTGATTTTGATTGGTTATTCCTTCGGGGCCGAAGTCATCCCCTTTG
TGCTAAATCAGATGCCCGCGCGGTATCGAAACAACGTCTTGGGTGCTGTGCTGCTCTCTCCTTCACAATCTTCGGATTTT
GAAATCCATGTGAGCGAGATGGTCACCTCGGATAATCAATCGGCCCGTTACTTAACCTTGCCCGAAGTGAACAAACAAAC
CACTGTGCCTATGCTTTGCCTCTACGGTAAAGAGGACGATGCGCCGCTGCATTTATGCCCTGCGGTCAAGCAGCCCAATG
TCACTGTGATCGCGTTAAGCGGTGGCCACAGTTTTGATGATGACTACGATAAAGTGGTCAAGCTGATAAAAGGTTGGCTA
AAGCCAAGTTAG

Upstream 100 bases:

>100_bases
TTGATTTGTTATGGAGGGCTATCTTTACCCGTAGTGGTGGGTAGTTTGGTGACCTTAACGAGTCGTGGTGCAACTGGCGT
ATTTAAAAAGTAGGTGCGAG

Downstream 100 bases:

>100_bases
TGCGATTTAGTGCATATGGCATCCTACGAGCCTAATGCTTTGGAATAAAACAAAGGGCGCAGATGCGCCCTTTGTTTTAG
GTTGTACTACAGCGAATGAC

Product: virulence factor family protein

Products: NA

Alternate protein names: Virulence Protein; Type IV Secretory Pathway VirJ Component-Like Protein; Acid lerance Protein; Type IV Secretion System VirJ-Like Protein; Acid Virulence Protein B; AcvB-Related Protein; Type IV Secretory Pathway Virj Component-Related Protein; Virj-Like Protein; Glycosyl Transferase/Polysaccharide Deacetylase; Type IV Secretory Pathway VirJ Component; Virulance And Acid lerance Protein; Type IV Secretion System Virj-Like Protein; Virulence Factor; Chromosomal Virulence Protein B

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MTKSLIKILSVLLLCSTANAFADEFADNLGLSLLPVEPSTQVNVSSYHTKPPLVIFLSGDGGWATLDKAVGGILQQQGWP
VVGWSSLKYYWKQKDPKDVTQDTLAIIDKYQAEFGTQKVILIGYSFGAEVIPFVLNQMPARYRNNVLGAVLLSPSQSSDF
EIHVSEMVTSDNQSARYLTLPEVNKQTTVPMLCLYGKEDDAPLHLCPAVKQPNVTVIALSGGHSFDDDYDKVVKLIKGWL
KPS

Sequences:

>Translated_243_residues
MTKSLIKILSVLLLCSTANAFADEFADNLGLSLLPVEPSTQVNVSSYHTKPPLVIFLSGDGGWATLDKAVGGILQQQGWP
VVGWSSLKYYWKQKDPKDVTQDTLAIIDKYQAEFGTQKVILIGYSFGAEVIPFVLNQMPARYRNNVLGAVLLSPSQSSDF
EIHVSEMVTSDNQSARYLTLPEVNKQTTVPMLCLYGKEDDAPLHLCPAVKQPNVTVIALSGGHSFDDDYDKVVKLIKGWL
KPS
>Mature_242_residues
TKSLIKILSVLLLCSTANAFADEFADNLGLSLLPVEPSTQVNVSSYHTKPPLVIFLSGDGGWATLDKAVGGILQQQGWPV
VGWSSLKYYWKQKDPKDVTQDTLAIIDKYQAEFGTQKVILIGYSFGAEVIPFVLNQMPARYRNNVLGAVLLSPSQSSDFE
IHVSEMVTSDNQSARYLTLPEVNKQTTVPMLCLYGKEDDAPLHLCPAVKQPNVTVIALSGGHSFDDDYDKVVKLIKGWLK
PS

Specific function: Unknown

COG id: COG3946

COG function: function code U; Type IV secretory pathway, VirJ component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26691; Mature: 26560

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: PS00435 PEROXIDASE_1 ; PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKSLIKILSVLLLCSTANAFADEFADNLGLSLLPVEPSTQVNVSSYHTKPPLVIFLSGD
CCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCCCEEEEEECC
GGWATLDKAVGGILQQQGWPVVGWSSLKYYWKQKDPKDVTQDTLAIIDKYQAEFGTQKVI
CCHHHHHHHHHHHHHHCCCCEECHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCEEE
LIGYSFGAEVIPFVLNQMPARYRNNVLGAVLLSPSQSSDFEIHVSEMVTSDNQSARYLTL
EEEECCCHHHHHHHHHHCCHHHHCCCEEEEEECCCCCCCEEEEHHHHHCCCCCCCEEEEC
PEVNKQTTVPMLCLYGKEDDAPLHLCPAVKQPNVTVIALSGGHSFDDDYDKVVKLIKGWL
CCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHC
KPS
CCC
>Mature Secondary Structure 
TKSLIKILSVLLLCSTANAFADEFADNLGLSLLPVEPSTQVNVSSYHTKPPLVIFLSGD
CHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCCCEEEEEECC
GGWATLDKAVGGILQQQGWPVVGWSSLKYYWKQKDPKDVTQDTLAIIDKYQAEFGTQKVI
CCHHHHHHHHHHHHHHCCCCEECHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCEEE
LIGYSFGAEVIPFVLNQMPARYRNNVLGAVLLSPSQSSDFEIHVSEMVTSDNQSARYLTL
EEEECCCHHHHHHHHHHCCHHHHCCCEEEEEECCCCCCCEEEEHHHHHCCCCCCCEEEEC
PEVNKQTTVPMLCLYGKEDDAPLHLCPAVKQPNVTVIALSGGHSFDDDYDKVVKLIKGWL
CCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHC
KPS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA