Definition Shewanella sp. MR-4 chromosome, complete genome.
Accession NC_008321
Length 4,706,287

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The map label for this gene is yfcL [C]

Identifier: 113969761

GI number: 113969761

Start: 1656735

End: 1657016

Strand: Direct

Name: yfcL [C]

Synonym: Shewmr4_1419

Alternate gene names: 113969761

Gene position: 1656735-1657016 (Clockwise)

Preceding gene: 113969760

Following gene: 113969762

Centisome position: 35.2

GC content: 47.52

Gene sequence:

>282_bases
ATGTTAGAGCAGTATGAAGAAGCACTAGAACAGTGGATAGAGTCTGTAGTAAGCCATGGTGATGACGACGCCTTATTTGC
CTGTGGTTATCTGCAAGGGCATGTGGCGGTGGTGTTATCGCAACTCGAAGACGAAGGCGAGAGTACGCTAGAAGCCTTGC
TCGAAAAAATGACCGACTGTTTAGCCCTCGCGCGCCAAGAATTAAATGATGCCGATTTTGCATTAGTGGAAGCGGCGTGG
ACACAATTACATGGCAAGATTGTTAGTCATTTAGCGGCCTAA

Upstream 100 bases:

>100_bases
TATGTGATGTATCAGGTGGCCAACCCCGACTATTCAGATTTATAGCACCGAGGGGCCAGCGGCCATTTGGGCGAAATACG
TTATTGGAGAGTTTGACCCG

Downstream 100 bases:

>100_bases
TTGATGAGTACATCCACGACGACTTCGGTTGATTCCATGGCAAAACCTGAGGTGCAGCAAGCGGTTTATATCGGTCTAGT
CAATCCGAAAACTCCGACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MLEQYEEALEQWIESVVSHGDDDALFACGYLQGHVAVVLSQLEDEGESTLEALLEKMTDCLALARQELNDADFALVEAAW
TQLHGKIVSHLAA

Sequences:

>Translated_93_residues
MLEQYEEALEQWIESVVSHGDDDALFACGYLQGHVAVVLSQLEDEGESTLEALLEKMTDCLALARQELNDADFALVEAAW
TQLHGKIVSHLAA
>Mature_93_residues
MLEQYEEALEQWIESVVSHGDDDALFACGYLQGHVAVVLSQLEDEGESTLEALLEKMTDCLALARQELNDADFALVEAAW
TQLHGKIVSHLAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10245; Mature: 10245

Theoretical pI: Translated: 3.83; Mature: 3.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEQYEEALEQWIESVVSHGDDDALFACGYLQGHVAVVLSQLEDEGESTLEALLEKMTDC
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LALARQELNDADFALVEAAWTQLHGKIVSHLAA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLEQYEEALEQWIESVVSHGDDDALFACGYLQGHVAVVLSQLEDEGESTLEALLEKMTDC
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LALARQELNDADFALVEAAWTQLHGKIVSHLAA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA