| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113969760
Identifier: 113969760
GI number: 113969760
Start: 1655537
End: 1656679
Strand: Direct
Name: 113969760
Synonym: Shewmr4_1418
Alternate gene names: NA
Gene position: 1655537-1656679 (Clockwise)
Preceding gene: 113969759
Following gene: 113969761
Centisome position: 35.18
GC content: 50.74
Gene sequence:
>1143_bases GTGATCCGGTTTCGTTTAGGCTTAGTCATCAATCCACTGGCGGGTTTAGGTGGTAGTGTGGGTCTTAAGGGTAGCGATGG TGTGGCAGAAGAAGCCCTTGCCTTAGGCGCCGAGCCCAAGGCGATAAAGCGTATGATGCAAGCCTTAGAAGTGATTGCCC CTTTTGCCAAAGATATCGAAATCATTACCGCCTCAGGTGTGATGGGGGAGGATGCTGCCAACGCCTTAGGTTTTAACACC CGTGTGGTGTATCAAACTCCGGATAAAACTCAAGCGATAGACACGCAAGCCGTTGTGCGTACCTTGCTGAACGAACCGTT AGATTTATTACTGTTTGCGGGGGGCGATGGCACGGCGCGCGATGTGTATAGCGTGTTTGAACAAGCCGTTATCGACGATA AATTACCCGTGCTTGGTGTGCCGGCTGGGGTAAAAATCCATTCGGGCGTTTACGGCATCACACCCCATGCTGCGGGCATG GTCGTGAAAATGTTGCTCGAAGGTGAGTTAGTCAGCCTGATGAGCGCCGATGTGATGGATATTGATGAAGTGGCCTTTCG CCAAGGCACGGTGCGCGCCAAACGGTTTGGTGAGCTGTTAGTGCCAGCAGAACCCCGTTATGTGCAAGCGGTGAAGATGG GCGGAAAAGAAGTCGATGAGCTCGTACTCGCCGACATTGCCGCCGATGTTATCCAGCAAATGGAAGATGAGCTGTATATT ATGGGCTCGGGCAGCACGGTCGCCTTTGTGATGGAAGAACTTGGGCTAGATAACACCCTGTTGGGGGTTGATCTTATCCA AGATAAAGCCTTAGTGGCGAGTGATTTAACCGCCAAGCAGTTGCTTGACCTTACTCAAGATAAGCCGGCAAAACTGGTAA TTACCTTGATTGGCGGGCAGGGGCATATTCTCGGTCGTGGCAACCAACAGTTGTCGCCAGAGCTTATCCGCCGCCTCGGT AAGGACAATATTATTATCCTCGCCACAAAAACTAAGCTAAAAGCACTTGAAGGACGCCCCTTAATTGTGGATAGTGGCGA CCCTCAATTAGATCGTGAGCTTTGTGGCTATTACAAAGTGACGACGGGTTACCATGATTATGTGATGTATCAGGTGGCCA ACCCCGACTATTCAGATTTATAG
Upstream 100 bases:
>100_bases TCCCTAAGGATAGGCCGCAAGCAGTTGCTGCATAAGCTTATATTTTATTGTGAAAAATAACTCATTGTAAAAACTAGAAT AATTAACAAGAGAGGTTAAG
Downstream 100 bases:
>100_bases CACCGAGGGGCCAGCGGCCATTTGGGCGAAATACGTTATTGGAGAGTTTGACCCGATGTTAGAGCAGTATGAAGAAGCAC TAGAACAGTGGATAGAGTCT
Product: ATP-NAD/AcoX kinase
Products: NA
Alternate protein names: ATP-NAD Kinase; NAD(+)/NADH Kinase; Inorganic Polyphosphate/ATP-NAD Kinase; Homolog NAD Kinase
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MIRFRLGLVINPLAGLGGSVGLKGSDGVAEEALALGAEPKAIKRMMQALEVIAPFAKDIEIITASGVMGEDAANALGFNT RVVYQTPDKTQAIDTQAVVRTLLNEPLDLLLFAGGDGTARDVYSVFEQAVIDDKLPVLGVPAGVKIHSGVYGITPHAAGM VVKMLLEGELVSLMSADVMDIDEVAFRQGTVRAKRFGELLVPAEPRYVQAVKMGGKEVDELVLADIAADVIQQMEDELYI MGSGSTVAFVMEELGLDNTLLGVDLIQDKALVASDLTAKQLLDLTQDKPAKLVITLIGGQGHILGRGNQQLSPELIRRLG KDNIIILATKTKLKALEGRPLIVDSGDPQLDRELCGYYKVTTGYHDYVMYQVANPDYSDL
Sequences:
>Translated_380_residues MIRFRLGLVINPLAGLGGSVGLKGSDGVAEEALALGAEPKAIKRMMQALEVIAPFAKDIEIITASGVMGEDAANALGFNT RVVYQTPDKTQAIDTQAVVRTLLNEPLDLLLFAGGDGTARDVYSVFEQAVIDDKLPVLGVPAGVKIHSGVYGITPHAAGM VVKMLLEGELVSLMSADVMDIDEVAFRQGTVRAKRFGELLVPAEPRYVQAVKMGGKEVDELVLADIAADVIQQMEDELYI MGSGSTVAFVMEELGLDNTLLGVDLIQDKALVASDLTAKQLLDLTQDKPAKLVITLIGGQGHILGRGNQQLSPELIRRLG KDNIIILATKTKLKALEGRPLIVDSGDPQLDRELCGYYKVTTGYHDYVMYQVANPDYSDL >Mature_380_residues MIRFRLGLVINPLAGLGGSVGLKGSDGVAEEALALGAEPKAIKRMMQALEVIAPFAKDIEIITASGVMGEDAANALGFNT RVVYQTPDKTQAIDTQAVVRTLLNEPLDLLLFAGGDGTARDVYSVFEQAVIDDKLPVLGVPAGVKIHSGVYGITPHAAGM VVKMLLEGELVSLMSADVMDIDEVAFRQGTVRAKRFGELLVPAEPRYVQAVKMGGKEVDELVLADIAADVIQQMEDELYI MGSGSTVAFVMEELGLDNTLLGVDLIQDKALVASDLTAKQLLDLTQDKPAKLVITLIGGQGHILGRGNQQLSPELIRRLG KDNIIILATKTKLKALEGRPLIVDSGDPQLDRELCGYYKVTTGYHDYVMYQVANPDYSDL
Specific function: Unknown
COG id: COG3199
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40774; Mature: 40774
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRFRLGLVINPLAGLGGSVGLKGSDGVAEEALALGAEPKAIKRMMQALEVIAPFAKDIE CEEEEECEEECHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEE IITASGVMGEDAANALGFNTRVVYQTPDKTQAIDTQAVVRTLLNEPLDLLLFAGGDGTAR EEEECCCCCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHH DVYSVFEQAVIDDKLPVLGVPAGVKIHSGVYGITPHAAGMVVKMLLEGELVSLMSADVMD HHHHHHHHHHHCCCCCEEECCCCCEEECCEEECCCHHHHHHHHHHHCCHHHHHHHCCCCC IDEVAFRQGTVRAKRFGELLVPAEPRYVQAVKMGGKEVDELVLADIAADVIQQMEDELYI HHHHHHHCCCHHHHHHCCEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEE MGSGSTVAFVMEELGLDNTLLGVDLIQDKALVASDLTAKQLLDLTQDKPAKLVITLIGGQ EECCCCHHHHHHHHCCCCEEEEHHHHHCCHHHHHCCCHHHHHHHCCCCCCEEEEEEECCC GHILGRGNQQLSPELIRRLGKDNIIILATKTKLKALEGRPLIVDSGDPQLDRELCGYYKV EEEEECCCCCCCHHHHHHCCCCCEEEEEECHHHHHCCCCEEEEECCCCHHHHHHCCCEEE TTGYHDYVMYQVANPDYSDL ECCCCEEEEEEECCCCCCCC >Mature Secondary Structure MIRFRLGLVINPLAGLGGSVGLKGSDGVAEEALALGAEPKAIKRMMQALEVIAPFAKDIE CEEEEECEEECHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEE IITASGVMGEDAANALGFNTRVVYQTPDKTQAIDTQAVVRTLLNEPLDLLLFAGGDGTAR EEEECCCCCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHH DVYSVFEQAVIDDKLPVLGVPAGVKIHSGVYGITPHAAGMVVKMLLEGELVSLMSADVMD HHHHHHHHHHHCCCCCEEECCCCCEEECCEEECCCHHHHHHHHHHHCCHHHHHHHCCCCC IDEVAFRQGTVRAKRFGELLVPAEPRYVQAVKMGGKEVDELVLADIAADVIQQMEDELYI HHHHHHHCCCHHHHHHCCEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEE MGSGSTVAFVMEELGLDNTLLGVDLIQDKALVASDLTAKQLLDLTQDKPAKLVITLIGGQ EECCCCHHHHHHHHCCCCEEEEHHHHHCCHHHHHCCCHHHHHHHCCCCCCEEEEEEECCC GHILGRGNQQLSPELIRRLGKDNIIILATKTKLKALEGRPLIVDSGDPQLDRELCGYYKV EEEEECCCCCCCHHHHHHCCCCCEEEEEECHHHHHCCCCEEEEECCCCHHHHHHCCCEEE TTGYHDYVMYQVANPDYSDL ECCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA