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The map label for this gene is recA [H]

Identifier: 113969469

GI number: 113969469

Start: 1321203

End: 1322276

Strand: Direct

Name: recA [H]

Synonym: Shewmr4_1125

Alternate gene names: 113969469

Gene position: 1321203-1322276 (Clockwise)

Preceding gene: 113969467

Following gene: 113969470

Centisome position: 28.07

GC content: 46.0

Gene sequence:

>1074_bases
ATGAAGGTCGATCCAAACAAAGAGAAAGCACTTGCTGCGGTATTGAGCCAAATTGAAAAGCAATTTGGTAAAGGCTCCAT
CATGAAGCTGGGCGAAGACCGCTCTATGGATGTTGAGACTATTTCTACTGGTTCACTTTCCCTTGACGTCGCCTTAGGTG
CTGGCGGTTTACCAATGGGACGTATCGTTGAGATTTATGGTCCTGAATCATCAGGTAAAACAACGCTAACATTAGAAGTG
ATTGCCGCCGCTCAGCGGGAAGGTAAAACCTGTGCCTTTATCGACGCCGAGCACGCGCTAGACCCTATCTATGCTAAAAA
ATTAGGCGTAGATATCGATAACTTACTGTGTTCACAACCCGATACTGGTGAACAAGCCCTTGAGATCTGTGATGCGTTAA
CCCGCTCTGGCGCAGTAGATGTGATCATCGTTGACTCGGTCGCGGCATTAACACCCAAAGCAGAAATTGAAGGTGAAATC
GGTGACTCACATATGGGCTTAGCGGCGCGTATGATGAGCCAAGCGATGCGTAAGTTAGCGGGTAACCTCAAGCAATCGAA
TACACTGTTAATCTTCATCAACCAAATTCGTATGAAGATTGGTGTGATGTTTGGTAACCCAGAAACCACAACGGGCGGTA
ACGCGCTGAAATTCTACGCCTCTGTTCGTCTTGATATTCGCCGTACTGGTGCTATCAAAGAAGGCGATGAAGTGGTAGGT
AACGAGACGCGCGTTAAAGTGGTTAAAAACAAAGTTGCTGCGCCGTTTAAGCAAGCTGAGTTCCAAATTCTTTACGGTCA
AGGTATCAACCGTACCGGTGAATTAGTCGATTTAGGTGTGGCTCATAAACTTATCGAAAAAGCCGGTGCATGGTACAGCT
ACAAGGGTGACAAGATTGGTCAGGGCCGTGCAAATGCTGGCAAATATTTGACTGAAAACCCAGCGATAGCAGCTGAAATT
GATAAAACACTACGTGAGCTATTATTGAGTAACCCTGCAGCCTTGTCATCATCAGCTTCTGATGATGAGAATAGTGAAGG
CAATGTTGACTTCGAAACAGGCGAAGTATTCTGA

Upstream 100 bases:

>100_bases
AGCAGATTATGACAAAGAGCCTCGCTTTTTGTATTACCCGCTTTATTAAATTGAATATCACTTTTGACAGTACTGATACT
GTCTAGATGAGGGAACAGGA

Downstream 100 bases:

>100_bases
GCCAGTCAGCCCGTCAAATCGCGGTCGCGCTGTTAGCGCGCCGCGACTATTCCCGCCAAGAAATCCGCTCCAAACTGCTC
GAAAAAGGCTTTGAGGTCGT

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MKVDPNKEKALAAVLSQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMGRIVEIYGPESSGKTTLTLEV
IAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVG
NETRVKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQGRANAGKYLTENPAIAAEI
DKTLRELLLSNPAALSSSASDDENSEGNVDFETGEVF

Sequences:

>Translated_357_residues
MKVDPNKEKALAAVLSQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMGRIVEIYGPESSGKTTLTLEV
IAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVG
NETRVKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQGRANAGKYLTENPAIAAEI
DKTLRELLLSNPAALSSSASDDENSEGNVDFETGEVF
>Mature_357_residues
MKVDPNKEKALAAVLSQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMGRIVEIYGPESSGKTTLTLEV
IAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVG
NETRVKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQGRANAGKYLTENPAIAAEI
DKTLRELLLSNPAALSSSASDDENSEGNVDFETGEVF

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=353, Percent_Identity=85.5524079320113, Blast_Score=615, Evalue=1e-177,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 38095; Mature: 38095

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVDPNKEKALAAVLSQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMG
CCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCEEEEEEECCCCCCCC
RIVEIYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQP
CEEEEECCCCCCCEEEEEEEEEHHHCCCCEEEEEEHHHCCCHHHHHHHCCCHHHHHCCCC
DTGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA
CCHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHH
GNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVG
CCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCHHCC
NETRVKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIG
CCCEEEEHHHHHCCCCHHCCEEEEECCCCCCCCCEEHHHHHHHHHHHHCCEEEECCCCCC
QGRANAGKYLTENPAIAAEIDKTLRELLLSNPAALSSSASDDENSEGNVDFETGEVF
CCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCC
>Mature Secondary Structure
MKVDPNKEKALAAVLSQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMG
CCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCEEEEEEECCCCCCCC
RIVEIYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQP
CEEEEECCCCCCCEEEEEEEEEHHHCCCCEEEEEEHHHCCCHHHHHHHCCCHHHHHCCCC
DTGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA
CCHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHH
GNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVG
CCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCHHCC
NETRVKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIG
CCCEEEEHHHHHCCCCHHCCEEEEECCCCCCCCCEEHHHHHHHHHHHHCCEEEECCCCCC
QGRANAGKYLTENPAIAAEIDKTLRELLLSNPAALSSSASDDENSEGNVDFETGEVF
CCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]