| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is recX [H]
Identifier: 113969470
GI number: 113969470
Start: 1322390
End: 1322761
Strand: Direct
Name: recX [H]
Synonym: Shewmr4_1126
Alternate gene names: 113969470
Gene position: 1322390-1322761 (Clockwise)
Preceding gene: 113969469
Following gene: 113969471
Centisome position: 28.1
GC content: 44.89
Gene sequence:
>372_bases GTGCTCGATGATTGTGAAGCATCGGGTTTTATCAATGATAAACGTTATGCTGAGCTGCTCGTAAGAAGCCATATTGCCCG TGGTCATGGGCCTATCCGTATTCGTCAAGCCATTGCCCAAAAGGGGCTTTCAAAGGATTGTATCGAAGCCGCGTTATCTG TAAATGATCATGATTGGTTTGAGTTAGCAAAAGCCAAAGCCATCAAAAAATATGCTACCCCTAAAGTCACCGCGGTAAAA GGCTCACAATCCCGCGAGCTAGTGGCGAAAGAAAAAGCCAAACGGGTGCGGTTTTTACTGAGCCAAGGCTTTAATTACGA ACAAGTCTCCTATGCTTTAGATTACGACCCCTTGGCAGATAATGATGACTAA
Upstream 100 bases:
>100_bases TCAAATCGCGGTCGCGCTGTTAGCGCGCCGCGACTATTCCCGCCAAGAAATCCGCTCCAAACTGCTCGAAAAAGGCTTTG AGGTCGTAGATATCGATCCC
Downstream 100 bases:
>100_bases CGTCATGGCATAAACTCGCAGCCCTTGGCTTGTCTGGCCATTGTCTTTTGCGTTCGGCAGCAGTGCGGGTTCGCCCCATC GACTCCTCTTTACCGCTTGG
Product: regulatory protein RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MLDDCEASGFINDKRYAELLVRSHIARGHGPIRIRQAIAQKGLSKDCIEAALSVNDHDWFELAKAKAIKKYATPKVTAVK GSQSRELVAKEKAKRVRFLLSQGFNYEQVSYALDYDPLADNDD
Sequences:
>Translated_123_residues MLDDCEASGFINDKRYAELLVRSHIARGHGPIRIRQAIAQKGLSKDCIEAALSVNDHDWFELAKAKAIKKYATPKVTAVK GSQSRELVAKEKAKRVRFLLSQGFNYEQVSYALDYDPLADNDD >Mature_123_residues MLDDCEASGFINDKRYAELLVRSHIARGHGPIRIRQAIAQKGLSKDCIEAALSVNDHDWFELAKAKAIKKYATPKVTAVK GSQSRELVAKEKAKRVRFLLSQGFNYEQVSYALDYDPLADNDD
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
Organism=Escherichia coli, GI1789050, Length=105, Percent_Identity=36.1904761904762, Blast_Score=72, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 13813; Mature: 13813
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDDCEASGFINDKRYAELLVRSHIARGHGPIRIRQAIAQKGLSKDCIEAALSVNDHDWF CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCHHH ELAKAKAIKKYATPKVTAVKGSQSRELVAKEKAKRVRFLLSQGFNYEQVSYALDYDPLAD HHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCC NDD CCC >Mature Secondary Structure MLDDCEASGFINDKRYAELLVRSHIARGHGPIRIRQAIAQKGLSKDCIEAALSVNDHDWF CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCHHH ELAKAKAIKKYATPKVTAVKGSQSRELVAKEKAKRVRFLLSQGFNYEQVSYALDYDPLAD HHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCC NDD CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]