Click here to switch to the map view.

The map label for this gene is 113969313

Identifier: 113969313

GI number: 113969313

Start: 1135997

End: 1137130

Strand: Direct

Name: 113969313

Synonym: Shewmr4_0969

Alternate gene names: NA

Gene position: 1135997-1137130 (Clockwise)

Preceding gene: 113969310

Following gene: 113969317

Centisome position: 24.14

GC content: 52.03

Gene sequence:

>1134_bases
GTGGCGCAGCATTCCCCAGAACCGTCGAGCTCGGCGAATACAACACAATCGAATATCAAAATTGCGACCGTGAATCTATT
TAACTTTATCGAGCCGCCCTCTGCCTTTTACGATTTTGAGAATATCTATAGCCACGGCCAATGGCAGAAAAAGTGCCAGT
GGTTTAGCGAGTTATTGAATCAACATCATCCGGATATTGTCGGGTTTCAGGAGGTGTTTAGCCCCGAACCGTTACGCCAG
CTTGCGTTGCAGCAGGGACTCACTCACTTTGCGGTGGTCGATAGTGCGACCTTAGTCAGTGACTATATCTACCAAAGCCC
TGTGGTGGCGTTAGCGTCTCGCTTCCCTATCCTTGAGGTACACGCTATCGAACCAGAGGTGCACTTAGTGGCGGCGATGG
GTCTGTCGAGCGAATTTAGCTTTAGCCGTAAAGTGTTACGGGCGACAGTGGCGGTGCCGCAGATTGGCCCCTGTGATTGC
TATGTGGTGCATTTTAAATCTAAGCGGCCAGGATTGGCCTTAGAGCCGCATCCCTTGGGCTTGTCGTTAAATGCGCCGTC
GGATCTTAAGTTACACGCCGAGACTAAGCTATTAACCGAACAAGCTCTTGGTCGCTGGGCCTCGACCATGCAGCGGGGCG
CCGAGGCGGCGTTGCTGTTCCATGCCATACTCGCCAGAAGACAGAGTGCCAAATATCCAGTGATCCTGATGGGGGATTTT
AACGATAGTTTGTCCTTAGGCGCGCTGGATGCGTTAACGCTCCAAGGCGAAGCGCTGCACAGTAACGATATTAAAGCCGC
AGGGCTTGGGCATTTATCCGATGCGGCGTTAGCGCAAGTATTTGCCCACTATCGATTACAAGATGCCTATGAGCTGTTTA
TCGAAGCCAATTTAGCCGATAACGCCGTCCATTACCGTGAGCATAGGTCGCCCACCCATTACTATGGTCCTAAAGGATCA
GTGCTGGATTATGTGTTGCTCTCCAATGAGTTTGATGCCAGCGATAGCCGCAGTTTGGCGCAGGTGGTGGATTATCAGAC
CTGCGATAGACACTTAGTCAGGCCCGAATATGAGCGCGATGCCTATAGTACCGACCATGCGCCCGTGATAGTGGAGTTGG
CACTGCGGCGTTAG

Upstream 100 bases:

>100_bases
TGTGTCTATCGCCTAAGCTTTGGGCGAGTAACCGTTTCGAGTCTGCATCTATTTAAATCGCTTATTGATAGCGATGATTT
GGCTTAAGAGGAATCATATT

Downstream 100 bases:

>100_bases
CGGTTAGAGCAGTTGCTAGCTGTACATAACGGCAGATGCCTTAATCGTTCGGCTGAACACTCAATATCAAGCCTAATTGA
AACCAAGCTTGCAGCGCTTG

Product: endonuclease/exonuclease/phosphatase

Products: NA

Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Endonuclease/Exonuclease/Phosphatase Family

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MAQHSPEPSSSANTTQSNIKIATVNLFNFIEPPSAFYDFENIYSHGQWQKKCQWFSELLNQHHPDIVGFQEVFSPEPLRQ
LALQQGLTHFAVVDSATLVSDYIYQSPVVALASRFPILEVHAIEPEVHLVAAMGLSSEFSFSRKVLRATVAVPQIGPCDC
YVVHFKSKRPGLALEPHPLGLSLNAPSDLKLHAETKLLTEQALGRWASTMQRGAEAALLFHAILARRQSAKYPVILMGDF
NDSLSLGALDALTLQGEALHSNDIKAAGLGHLSDAALAQVFAHYRLQDAYELFIEANLADNAVHYREHRSPTHYYGPKGS
VLDYVLLSNEFDASDSRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAPVIVELALRR

Sequences:

>Translated_377_residues
MAQHSPEPSSSANTTQSNIKIATVNLFNFIEPPSAFYDFENIYSHGQWQKKCQWFSELLNQHHPDIVGFQEVFSPEPLRQ
LALQQGLTHFAVVDSATLVSDYIYQSPVVALASRFPILEVHAIEPEVHLVAAMGLSSEFSFSRKVLRATVAVPQIGPCDC
YVVHFKSKRPGLALEPHPLGLSLNAPSDLKLHAETKLLTEQALGRWASTMQRGAEAALLFHAILARRQSAKYPVILMGDF
NDSLSLGALDALTLQGEALHSNDIKAAGLGHLSDAALAQVFAHYRLQDAYELFIEANLADNAVHYREHRSPTHYYGPKGS
VLDYVLLSNEFDASDSRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAPVIVELALRR
>Mature_376_residues
AQHSPEPSSSANTTQSNIKIATVNLFNFIEPPSAFYDFENIYSHGQWQKKCQWFSELLNQHHPDIVGFQEVFSPEPLRQL
ALQQGLTHFAVVDSATLVSDYIYQSPVVALASRFPILEVHAIEPEVHLVAAMGLSSEFSFSRKVLRATVAVPQIGPCDCY
VVHFKSKRPGLALEPHPLGLSLNAPSDLKLHAETKLLTEQALGRWASTMQRGAEAALLFHAILARRQSAKYPVILMGDFN
DSLSLGALDALTLQGEALHSNDIKAAGLGHLSDAALAQVFAHYRLQDAYELFIEANLADNAVHYREHRSPTHYYGPKGSV
LDYVLLSNEFDASDSRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAPVIVELALRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41929; Mature: 41798

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQHSPEPSSSANTTQSNIKIATVNLFNFIEPPSAFYDFENIYSHGQWQKKCQWFSELLN
CCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHCHHHHHCCCCHHHHHHHHHHHHH
QHHPDIVGFQEVFSPEPLRQLALQQGLTHFAVVDSATLVSDYIYQSPVVALASRFPILEV
HCCCCCCCHHHHCCCCHHHHHHHHHCCCEEEHHCCHHHHHHHHHHCHHHHHHHCCCEEEE
HAIEPEVHLVAAMGLSSEFSFSRKVLRATVAVPQIGPCDCYVVHFKSKRPGLALEPHPLG
EEECCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEECCCCCE
LSLNAPSDLKLHAETKLLTEQALGRWASTMQRGAEAALLFHAILARRQSAKYPVILMGDF
EEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEECC
NDSLSLGALDALTLQGEALHSNDIKAAGLGHLSDAALAQVFAHYRLQDAYELFIEANLAD
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCC
NAVHYREHRSPTHYYGPKGSVLDYVLLSNEFDASDSRSLAQVVDYQTCDRHLVRPEYERD
CHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHCC
AYSTDHAPVIVELALRR
CCCCCCCCEEEEEEECC
>Mature Secondary Structure 
AQHSPEPSSSANTTQSNIKIATVNLFNFIEPPSAFYDFENIYSHGQWQKKCQWFSELLN
CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHCHHHHHCCCCHHHHHHHHHHHHH
QHHPDIVGFQEVFSPEPLRQLALQQGLTHFAVVDSATLVSDYIYQSPVVALASRFPILEV
HCCCCCCCHHHHCCCCHHHHHHHHHCCCEEEHHCCHHHHHHHHHHCHHHHHHHCCCEEEE
HAIEPEVHLVAAMGLSSEFSFSRKVLRATVAVPQIGPCDCYVVHFKSKRPGLALEPHPLG
EEECCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEECCCCCE
LSLNAPSDLKLHAETKLLTEQALGRWASTMQRGAEAALLFHAILARRQSAKYPVILMGDF
EEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEECC
NDSLSLGALDALTLQGEALHSNDIKAAGLGHLSDAALAQVFAHYRLQDAYELFIEANLAD
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCC
NAVHYREHRSPTHYYGPKGSVLDYVLLSNEFDASDSRSLAQVVDYQTCDRHLVRPEYERD
CHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHCC
AYSTDHAPVIVELALRR
CCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA